RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
GAPDH-210ENST00000496049 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
GAPDH-210ENST00000496049 ROCK1Q13464 1354 aa22.49■■□□□ 1.19
GAPDH-210ENST00000496049 GCC2Q8IWJ2 1684 aa22.49■■□□□ 1.19
GAPDH-210ENST00000496049 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
GAPDH-210ENST00000496049 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
GAPDH-210ENST00000496049 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
GAPDH-210ENST00000496049 KDM5CP41229 1560 aa22.47■■□□□ 1.19
GAPDH-210ENST00000496049 DIP2CQ9Y2E4 1556 aa22.47■■□□□ 1.19
GAPDH-210ENST00000496049 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
GAPDH-210ENST00000496049 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
GAPDH-210ENST00000496049 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
GAPDH-210ENST00000496049 HFM1A2PYH4 1435 aa22.44■■□□□ 1.18
GAPDH-210ENST00000496049 ATP7AQ04656 1500 aa22.44■■□□□ 1.18
GAPDH-210ENST00000496049 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
GAPDH-210ENST00000496049 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
GAPDH-210ENST00000496049 RTEL1-TNFRSF6BF6WH68 1400 aa22.43■■□□□ 1.18
GAPDH-210ENST00000496049 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
GAPDH-210ENST00000496049 CHIC2Q9UKJ5 165 aa22.43■■□□□ 1.18
GAPDH-210ENST00000496049 REREQ9P2R6 1566 aa22.4■■□□□ 1.18
GAPDH-210ENST00000496049 AFAP1Q8N556 730 aa22.39■■□□□ 1.17
GAPDH-210ENST00000496049 MLH3Q9UHC1 1453 aa22.39■■□□□ 1.17
GAPDH-210ENST00000496049 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
GAPDH-210ENST00000496049 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
GAPDH-210ENST00000496049 NAIPQ13075 1403 aa22.37■■□□□ 1.17
GAPDH-210ENST00000496049 KIF15Q9NS87 1388 aa22.37■■□□□ 1.17
GAPDH-210ENST00000496049 ZNF142P52746 1687 aaPredicted RBP22.36■■□□□ 1.17
GAPDH-210ENST00000496049 KIDINS220Q9ULH0 1771 aa22.36■■□□□ 1.17
GAPDH-210ENST00000496049 TOM1O60784 492 aa22.36■■□□□ 1.17
GAPDH-210ENST00000496049 AGLP35573 1532 aa22.36■■□□□ 1.17
GAPDH-210ENST00000496049 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
GAPDH-210ENST00000496049 RRP7BPQ9NSQ0 103 aa22.35■■□□□ 1.17
GAPDH-210ENST00000496049 DUOX2Q9NRD8 1548 aa22.35■■□□□ 1.17
GAPDH-210ENST00000496049 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
GAPDH-210ENST00000496049 PLA2R1Q13018 1463 aa22.33■■□□□ 1.16
GAPDH-210ENST00000496049 MROH2AA6NES4 1674 aa22.33■■□□□ 1.16
GAPDH-210ENST00000496049 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
GAPDH-210ENST00000496049 NPATQ14207 1427 aa22.31■■□□□ 1.16
GAPDH-210ENST00000496049 RAB3GAP2Q9H2M9 1393 aa22.31■■□□□ 1.16
GAPDH-210ENST00000496049 PKD2Q13563 968 aa22.31■■□□□ 1.16
GAPDH-210ENST00000496049 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
GAPDH-210ENST00000496049 ANKRD50Q9ULJ7 1429 aa22.3■■□□□ 1.16
GAPDH-210ENST00000496049 ACIN1Q9UKV3 1341 aaKnown RBP22.3■■□□□ 1.16
GAPDH-210ENST00000496049 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
GAPDH-210ENST00000496049 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
GAPDH-210ENST00000496049 CPS1P31327 1500 aa22.26■■□□□ 1.15
GAPDH-210ENST00000496049 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
GAPDH-210ENST00000496049 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
GAPDH-210ENST00000496049 A2MP01023 1474 aa22.25■■□□□ 1.15
GAPDH-210ENST00000496049 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
GAPDH-210ENST00000496049 HRCP23327 699 aa22.23■■□□□ 1.15
GAPDH-210ENST00000496049 POLR1AO95602 1720 aaPredicted RBP22.23■■□□□ 1.15
GAPDH-210ENST00000496049 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
GAPDH-210ENST00000496049 ZMYM3Q14202 1370 aa22.22■■□□□ 1.15
GAPDH-210ENST00000496049 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
GAPDH-210ENST00000496049 UNC13BO14795 1591 aa22.19■■□□□ 1.14
GAPDH-210ENST00000496049 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
GAPDH-210ENST00000496049 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
GAPDH-210ENST00000496049 RNF17Q9BXT8 1623 aaKnown RBP22.15■■□□□ 1.14
GAPDH-210ENST00000496049 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
GAPDH-210ENST00000496049 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
GAPDH-210ENST00000496049 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
GAPDH-210ENST00000496049 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
GAPDH-210ENST00000496049 POTEAQ6S8J7 498 aa22.1■■□□□ 1.13
GAPDH-210ENST00000496049 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
GAPDH-210ENST00000496049 KANK1Q14678 1352 aa22.09■■□□□ 1.13
GAPDH-210ENST00000496049 KIF3BO15066 747 aa22.08■■□□□ 1.13
GAPDH-210ENST00000496049 A2ML1A8K2U0 1454 aa22.08■■□□□ 1.12
GAPDH-210ENST00000496049 NUP155O75694 1391 aa22.07■■□□□ 1.12
GAPDH-210ENST00000496049 FAM135AQ9P2D6 1515 aa22.06■■□□□ 1.12
GAPDH-210ENST00000496049 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
GAPDH-210ENST00000496049 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
GAPDH-210ENST00000496049 ZC3H13Q5T200 1668 aaKnown RBP22.04■■□□□ 1.12
GAPDH-210ENST00000496049 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
GAPDH-210ENST00000496049 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
GAPDH-210ENST00000496049 PZPP20742 1482 aa22.03■■□□□ 1.12
GAPDH-210ENST00000496049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
GAPDH-210ENST00000496049 TET3O43151 1660 aa22■■□□□ 1.11
GAPDH-210ENST00000496049 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
GAPDH-210ENST00000496049 CEP152O94986 1710 aa21.98■■□□□ 1.11
GAPDH-210ENST00000496049 GGT6Q6P531 493 aa21.97■■□□□ 1.11
GAPDH-210ENST00000496049 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
GAPDH-210ENST00000496049 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
GAPDH-210ENST00000496049 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
GAPDH-210ENST00000496049 ABCC3O15438 1527 aa21.96■■□□□ 1.11
GAPDH-210ENST00000496049 SYNMO15061 1565 aa21.95■■□□□ 1.11
GAPDH-210ENST00000496049 CLSPNQ9HAW4 1339 aa21.95■■□□□ 1.1
GAPDH-210ENST00000496049 EFCAB6Q5THR3 1501 aa21.94■■□□□ 1.1
GAPDH-210ENST00000496049 IQGAP1P46940 1657 aa21.93■■□□□ 1.1
GAPDH-210ENST00000496049 NPHP4O75161 1426 aaPredicted RBP21.92■■□□□ 1.1
GAPDH-210ENST00000496049 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
GAPDH-210ENST00000496049 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
GAPDH-210ENST00000496049 E9PCH4 1651 aa21.9■■□□□ 1.1
GAPDH-210ENST00000496049 RPRD2Q5VT52 1461 aaKnown RBP21.89■■□□□ 1.09
GAPDH-210ENST00000496049 TNRQ92752 1358 aa21.87■■□□□ 1.09
GAPDH-210ENST00000496049 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
GAPDH-210ENST00000496049 XIRP1Q702N8 1843 aaKnown RBP21.85■■□□□ 1.09
GAPDH-210ENST00000496049 MED14O60244 1454 aa21.85■■□□□ 1.09
GAPDH-210ENST00000496049 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
GAPDH-210ENST00000496049 FBXO31Q5XUX0 539 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms