RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
ITGB1-217ENST00000494395 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.22
ITGB1-217ENST00000494395 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
ITGB1-217ENST00000494395 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
ITGB1-217ENST00000494395 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
ITGB1-217ENST00000494395 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
ITGB1-217ENST00000494395 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
ITGB1-217ENST00000494395 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
ITGB1-217ENST00000494395 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
ITGB1-217ENST00000494395 ABCB7O75027 752 aa13.67□□□□□ -0.22
ITGB1-217ENST00000494395 A2MP01023 1474 aa13.67□□□□□ -0.22
ITGB1-217ENST00000494395 PTPRMP28827 1452 aa13.67□□□□□ -0.22
ITGB1-217ENST00000494395 DNMT1P26358 1616 aaKnown RBP13.66□□□□□ -0.22
ITGB1-217ENST00000494395 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
ITGB1-217ENST00000494395 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
ITGB1-217ENST00000494395 AMER1Q5JTC6 1135 aaPredicted RBP13.64□□□□□ -0.23
ITGB1-217ENST00000494395 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
ITGB1-217ENST00000494395 ABCC5O15440 1437 aa13.64□□□□□ -0.23
ITGB1-217ENST00000494395 DAPK1P53355 1430 aa13.62□□□□□ -0.23
ITGB1-217ENST00000494395 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
ITGB1-217ENST00000494395 MLECQ14165 292 aa13.6□□□□□ -0.23
ITGB1-217ENST00000494395 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
ITGB1-217ENST00000494395 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
ITGB1-217ENST00000494395 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
ITGB1-217ENST00000494395 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
ITGB1-217ENST00000494395 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
ITGB1-217ENST00000494395 C3P01024 1663 aa13.57□□□□□ -0.24
ITGB1-217ENST00000494395 ADGRL2O95490 1459 aa13.56□□□□□ -0.24
ITGB1-217ENST00000494395 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
ITGB1-217ENST00000494395 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-217ENST00000494395 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
ITGB1-217ENST00000494395 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
ITGB1-217ENST00000494395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.55□□□□□ -0.24
ITGB1-217ENST00000494395 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
ITGB1-217ENST00000494395 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
ITGB1-217ENST00000494395 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
ITGB1-217ENST00000494395 PTPRKQ15262 1439 aa13.54□□□□□ -0.24
ITGB1-217ENST00000494395 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
ITGB1-217ENST00000494395 DSG3P32926 999 aa13.53□□□□□ -0.24
ITGB1-217ENST00000494395 KIF15Q9NS87 1388 aa13.53□□□□□ -0.24
ITGB1-217ENST00000494395 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
ITGB1-217ENST00000494395 ERBINQ96RT1 1412 aa13.52□□□□□ -0.25
ITGB1-217ENST00000494395 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
ITGB1-217ENST00000494395 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
ITGB1-217ENST00000494395 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
ITGB1-217ENST00000494395 SETD1BQ9UPS6 1966 aaKnown RBP13.51□□□□□ -0.25
ITGB1-217ENST00000494395 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
ITGB1-217ENST00000494395 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
ITGB1-217ENST00000494395 KIF3BO15066 747 aa13.5□□□□□ -0.25
ITGB1-217ENST00000494395 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
ITGB1-217ENST00000494395 GGT6Q6P531 493 aa13.5□□□□□ -0.25
ITGB1-217ENST00000494395 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
ITGB1-217ENST00000494395 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-217ENST00000494395 PROM2Q8N271 834 aa13.49□□□□□ -0.25
ITGB1-217ENST00000494395 ZC3H13Q5T200 1668 aaKnown RBP13.49□□□□□ -0.25
ITGB1-217ENST00000494395 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
ITGB1-217ENST00000494395 RRP7BPQ9NSQ0 103 aa13.48□□□□□ -0.25
ITGB1-217ENST00000494395 CHIC2Q9UKJ5 165 aa13.48□□□□□ -0.25
ITGB1-217ENST00000494395 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
ITGB1-217ENST00000494395 ABCC3O15438 1527 aa13.47□□□□□ -0.25
ITGB1-217ENST00000494395 CEP152O94986 1710 aa13.47□□□□□ -0.25
ITGB1-217ENST00000494395 NPATQ14207 1427 aa13.47□□□□□ -0.25
ITGB1-217ENST00000494395 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
ITGB1-217ENST00000494395 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
ITGB1-217ENST00000494395 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
ITGB1-217ENST00000494395 PZPP20742 1482 aa13.44□□□□□ -0.26
ITGB1-217ENST00000494395 CAMSAP1Q5T5Y3 1602 aa13.43□□□□□ -0.26
ITGB1-217ENST00000494395 ZNF142P52746 1687 aaPredicted RBP13.43□□□□□ -0.26
ITGB1-217ENST00000494395 MYO3AQ8NEV4 1616 aa13.42□□□□□ -0.26
ITGB1-217ENST00000494395 ANKRD50Q9ULJ7 1429 aa13.42□□□□□ -0.26
ITGB1-217ENST00000494395 UNC13BO14795 1591 aa13.41□□□□□ -0.26
ITGB1-217ENST00000494395 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
ITGB1-217ENST00000494395 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
ITGB1-217ENST00000494395 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
ITGB1-217ENST00000494395 GCC2Q8IWJ2 1684 aa13.4□□□□□ -0.26
ITGB1-217ENST00000494395 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
ITGB1-217ENST00000494395 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
ITGB1-217ENST00000494395 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
ITGB1-217ENST00000494395 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-217ENST00000494395 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
ITGB1-217ENST00000494395 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
ITGB1-217ENST00000494395 ITGAEP38570 1179 aa13.36□□□□□ -0.27
ITGB1-217ENST00000494395 HSPA2P54652 639 aa13.36□□□□□ -0.27
ITGB1-217ENST00000494395 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
ITGB1-217ENST00000494395 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
ITGB1-217ENST00000494395 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
ITGB1-217ENST00000494395 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
ITGB1-217ENST00000494395 TNRQ92752 1358 aa13.35□□□□□ -0.27
ITGB1-217ENST00000494395 TET3O43151 1660 aa13.35□□□□□ -0.27
ITGB1-217ENST00000494395 NAIPQ13075 1403 aa13.35□□□□□ -0.27
ITGB1-217ENST00000494395 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
ITGB1-217ENST00000494395 KANK1Q14678 1352 aa13.34□□□□□ -0.27
ITGB1-217ENST00000494395 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
ITGB1-217ENST00000494395 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
ITGB1-217ENST00000494395 SYNMO15061 1565 aa13.31□□□□□ -0.28
ITGB1-217ENST00000494395 E9PCH4 1651 aa13.31□□□□□ -0.28
ITGB1-217ENST00000494395 NOS1P29475 1434 aa13.3□□□□□ -0.28
ITGB1-217ENST00000494395 PLA2R1Q13018 1463 aa13.3□□□□□ -0.28
ITGB1-217ENST00000494395 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
ITGB1-217ENST00000494395 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms