RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 ESF1Q9H501 851 aaKnown RBP25.52■■□□□ 1.68
RER1-208ENST00000493207 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
RER1-208ENST00000493207 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
RER1-208ENST00000493207 MROH1Q8NDA8 1641 aa25.5■■□□□ 1.67
RER1-208ENST00000493207 DEPDC5O75140 1603 aa25.48■■□□□ 1.67
RER1-208ENST00000493207 GCC2Q8IWJ2 1684 aa25.48■■□□□ 1.67
RER1-208ENST00000493207 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
RER1-208ENST00000493207 MROH2AA6NES4 1674 aa25.47■■□□□ 1.67
RER1-208ENST00000493207 KDM5DQ9BY66 1539 aa25.47■■□□□ 1.67
RER1-208ENST00000493207 PLPPR3Q6T4P5 718 aa25.46■■□□□ 1.67
RER1-208ENST00000493207 PPP6R1Q9UPN7 881 aa25.46■■□□□ 1.67
RER1-208ENST00000493207 PRDM15P57071 1507 aaPredicted RBP25.46■■□□□ 1.67
RER1-208ENST00000493207 C3P01024 1663 aa25.45■■□□□ 1.67
RER1-208ENST00000493207 FAM135AQ9P2D6 1515 aa25.44■■□□□ 1.66
RER1-208ENST00000493207 CEP152O94986 1710 aa25.43■■□□□ 1.66
RER1-208ENST00000493207 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
RER1-208ENST00000493207 NAIPQ13075 1403 aa25.43■■□□□ 1.66
RER1-208ENST00000493207 WASHC2CQ9Y4E1 1318 aa25.42■■□□□ 1.66
RER1-208ENST00000493207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.661e-6■□□□□ 9.9
RER1-208ENST00000493207 HFM1A2PYH4 1435 aa25.41■■□□□ 1.66
RER1-208ENST00000493207 ABCC3O15438 1527 aa25.41■■□□□ 1.66
RER1-208ENST00000493207 CEBPAP49715 358 aaPredicted RBP25.4■■□□□ 1.66
RER1-208ENST00000493207 UNC13BO14795 1591 aa25.39■■□□□ 1.66
RER1-208ENST00000493207 ZMYM3Q14202 1370 aa25.38■■□□□ 1.65
RER1-208ENST00000493207 KANK1Q14678 1352 aa25.37■■□□□ 1.65
RER1-208ENST00000493207 CAMSAP1Q5T5Y3 1602 aa25.36■■□□□ 1.65
RER1-208ENST00000493207 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
RER1-208ENST00000493207 LMTK2Q8IWU2 1503 aa25.3■■□□□ 1.64
RER1-208ENST00000493207 PZPP20742 1482 aa25.29■■□□□ 1.64
RER1-208ENST00000493207 IQGAP3Q86VI3 1631 aa25.29■■□□□ 1.64
RER1-208ENST00000493207 CFAP65Q6ZU64 1925 aaKnown RBP25.26■■□□□ 1.63
RER1-208ENST00000493207 NUP155O75694 1391 aa25.26■■□□□ 1.63
RER1-208ENST00000493207 NPATQ14207 1427 aa25.26■■□□□ 1.63
RER1-208ENST00000493207 TET3O43151 1660 aa25.26■■□□□ 1.63
RER1-208ENST00000493207 PREX1Q8TCU6 1659 aa25.26■■□□□ 1.63
RER1-208ENST00000493207 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
RER1-208ENST00000493207 EFCAB6Q5THR3 1501 aa25.25■■□□□ 1.63
RER1-208ENST00000493207 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
RER1-208ENST00000493207 SETD1BQ9UPS6 1966 aaKnown RBP25.23■■□□□ 1.63
RER1-208ENST00000493207 ARHGAP31Q2M1Z3 1444 aa25.22■■□□□ 1.63
RER1-208ENST00000493207 TRIM52Q96A61 297 aa25.2■■□□□ 1.62
RER1-208ENST00000493207 ERVK-7P63135 1459 aa25.19■■□□□ 1.62
RER1-208ENST00000493207 E9PCH4 1651 aa25.19■■□□□ 1.62
RER1-208ENST00000493207 MYO3AQ8NEV4 1616 aa25.19■■□□□ 1.62
RER1-208ENST00000493207 SPATA31D1Q6ZQQ2 1576 aa25.18■■□□□ 1.62
RER1-208ENST00000493207 RAB3GAP2Q9H2M9 1393 aa25.18■■□□□ 1.62
RER1-208ENST00000493207 LMTK3Q96Q04 1460 aa25.17■■□□□ 1.62
RER1-208ENST00000493207 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
RER1-208ENST00000493207 UHRF1BP1Q6BDS2 1440 aa25.17■■□□□ 1.62
RER1-208ENST00000493207 TNRQ92752 1358 aa25.17■■□□□ 1.62
RER1-208ENST00000493207 RPRD2Q5VT52 1461 aaKnown RBP25.15■■□□□ 1.62
RER1-208ENST00000493207 ZNF142P52746 1687 aaPredicted RBP25.12■■□□□ 1.61
RER1-208ENST00000493207 CEP170BQ9Y4F5 1589 aaPredicted RBP25.1■■□□□ 1.61
RER1-208ENST00000493207 SYNMO15061 1565 aa25.09■■□□□ 1.61
RER1-208ENST00000493207 NOS1P29475 1434 aa25.07■■□□□ 1.6
RER1-208ENST00000493207 SLC4A1APQ9BWU0 796 aaKnown RBP25.07■■□□□ 1.6
RER1-208ENST00000493207 NLRP1Q9C000 1473 aa25.07■■□□□ 1.6
RER1-208ENST00000493207 ACIN1Q9UKV3 1341 aaKnown RBP25.07■■□□□ 1.6
RER1-208ENST00000493207 A2ML1A8K2U0 1454 aa25.06■■□□□ 1.6
RER1-208ENST00000493207 SPHKAPQ2M3C7 1700 aa25.05■■□□□ 1.6
RER1-208ENST00000493207 HSPA2P54652 639 aa25.04■■□□□ 1.6
RER1-208ENST00000493207 PKD2Q13563 968 aa25.03■■□□□ 1.6
RER1-208ENST00000493207 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
RER1-208ENST00000493207 HRCP23327 699 aa25.01■■□□□ 1.59
RER1-208ENST00000493207 MPHOSPH9Q99550 1183 aa25.01■■□□□ 1.59
RER1-208ENST00000493207 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
RER1-208ENST00000493207 UBR1Q8IWV7 1749 aa24.99■■□□□ 1.59
RER1-208ENST00000493207 PTPRTO14522 1441 aa24.96■■□□□ 1.59
RER1-208ENST00000493207 IDI1Q13907 227 aa24.96■■□□□ 1.59
RER1-208ENST00000493207 FOXD1Q16676 465 aa24.96■■□□□ 1.59
RER1-208ENST00000493207 SLC52A1Q9NWF4 448 aa24.95■■□□□ 1.58
RER1-208ENST00000493207 TRPM2O94759 1503 aa24.94■■□□□ 1.58
RER1-208ENST00000493207 KDM5AP29375 1690 aaKnown RBP24.93■■□□□ 1.58
RER1-208ENST00000493207 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
RER1-208ENST00000493207 ADGRB3O60242 1522 aa24.92■■□□□ 1.58
RER1-208ENST00000493207 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
RER1-208ENST00000493207 PLA2R1Q13018 1463 aa24.91■■□□□ 1.58
RER1-208ENST00000493207 CLTCL1P53675 1640 aa24.91■■□□□ 1.58
RER1-208ENST00000493207 STAG3Q9UJ98 1225 aa24.91■■□□□ 1.58
RER1-208ENST00000493207 THEMISQ8N1K5 641 aaPredicted RBP24.9■■□□□ 1.58
RER1-208ENST00000493207 TMEM131LA2VDJ0 1609 aa24.88■■□□□ 1.57
RER1-208ENST00000493207 POLR1AO95602 1720 aaPredicted RBP24.87■■□□□ 1.57
RER1-208ENST00000493207 PCGF6Q9BYE7 350 aa24.87■■□□□ 1.57
RER1-208ENST00000493207 CHGAP10645 457 aaKnown RBP24.86■■□□□ 1.57
RER1-208ENST00000493207 KIF1BO60333 1816 aa24.86■■□□□ 1.57
RER1-208ENST00000493207 NCKAP5LQ9HCH0 1330 aa24.84■■□□□ 1.57
RER1-208ENST00000493207 SLIT1O75093 1534 aa24.82■■□□□ 1.56
RER1-208ENST00000493207 ARHGAP23Q9P227 1491 aa24.81■■□□□ 1.56
RER1-208ENST00000493207 TMEM2Q9UHN6 1383 aa24.8■■□□□ 1.56
RER1-208ENST00000493207 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
RER1-208ENST00000493207 ANKLE2Q86XL3 938 aa24.79■■□□□ 1.56
RER1-208ENST00000493207 NEURL4Q96JN8 1562 aa24.79■■□□□ 1.56
RER1-208ENST00000493207 SCAF11Q99590 1463 aaKnown RBP24.76■■□□□ 1.55
RER1-208ENST00000493207 ANKRD30BQ9BXX2 1392 aa24.75■■□□□ 1.55
RER1-208ENST00000493207 LTKP29376 864 aa24.74■■□□□ 1.55
RER1-208ENST00000493207 TXNDC2Q86VQ3 553 aa24.74■■□□□ 1.55
RER1-208ENST00000493207 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
RER1-208ENST00000493207 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
RER1-208ENST00000493207 IQGAP1P46940 1657 aa24.73■■□□□ 1.55
RER1-208ENST00000493207 ZFYVE9O95405 1425 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms