RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 RTEL1-TNFRSF6BF6WH68 1400 aa40.12■■■■■ 4.01
CHKB-212ENST00000492582 RIMBP3CA6NJZ7 1639 aa40.1■■■■■ 4.01
CHKB-212ENST00000492582 RIMBP3BA6NNM3 1639 aa40.1■■■■■ 4.01
CHKB-212ENST00000492582 RIMBP3Q9UFD9 1639 aa40.1■■■■■ 4.01
CHKB-212ENST00000492582 ZFYVE16Q7Z3T8 1539 aa40.09■■■■■ 4.01
CHKB-212ENST00000492582 BCORL1Q5H9F3 1711 aa40.08■■■■■ 4.01
CHKB-212ENST00000492582 SPAG9O60271 1321 aaKnown RBP40.06■■■■■ 4
CHKB-212ENST00000492582 DCAF11Q8TEB1 546 aa40.06■■■■■ 4
CHKB-212ENST00000492582 FANCAO15360 1455 aa40.05■■■■■ 4
CHKB-212ENST00000492582 ASXL2Q76L83 1435 aa40.04■■■■■ 4
CHKB-212ENST00000492582 KDM2AQ9Y2K7 1162 aa40.04■■■■■ 4
CHKB-212ENST00000492582 ATP10AO60312 1499 aa40.02■■■■■ 4
CHKB-212ENST00000492582 AFAP1Q8N556 730 aa40.01■■■■■ 4
CHKB-212ENST00000492582 CARD11Q9BXL7 1154 aa39.99■■■■□ 3.99
CHKB-212ENST00000492582 INO80Q9ULG1 1556 aaPredicted RBP39.97■■■■□ 3.99
CHKB-212ENST00000492582 PRKRIP1Q9H875 184 aaPredicted RBP39.96■■■■□ 3.99
CHKB-212ENST00000492582 ARID4BQ4LE39 1312 aaPredicted RBP39.96■■■■□ 3.99
CHKB-212ENST00000492582 PRAG1Q86YV5 1406 aa39.94■■■■□ 3.98
CHKB-212ENST00000492582 ATP7AQ04656 1500 aa39.93■■■■□ 3.98
CHKB-212ENST00000492582 TRPM1Q7Z4N2 1603 aa39.92■■■■□ 3.98
CHKB-212ENST00000492582 A2MP01023 1474 aa39.92■■■■□ 3.98
CHKB-212ENST00000492582 SUPT16HQ9Y5B9 1047 aaKnown RBP39.92■■■■□ 3.98
CHKB-212ENST00000492582 ADGRL1O94910 1474 aa39.91■■■■□ 3.98
CHKB-212ENST00000492582 DEPDC5O75140 1603 aa39.89■■■■□ 3.98
CHKB-212ENST00000492582 ROCK2O75116 1388 aaKnown RBP39.87■■■■□ 3.97
CHKB-212ENST00000492582 SCAPERQ9BY12 1400 aa39.87■■■■□ 3.97
CHKB-212ENST00000492582 CYB5RLQ6IPT4 315 aa39.87■■■■□ 3.97
CHKB-212ENST00000492582 RGL3Q3MIN7 710 aa39.85■■■■□ 3.97
CHKB-212ENST00000492582 E9PCH4 1651 aa39.84■■■■□ 3.97
CHKB-212ENST00000492582 DHX29Q7Z478 1369 aaKnown RBP39.82■■■■□ 3.97
CHKB-212ENST00000492582 CCDC184Q52MB2 194 aa39.8■■■■□ 3.96
CHKB-212ENST00000492582 NPM1P06748 294 aaKnown RBP eCLIP39.79■■■■□ 3.96
CHKB-212ENST00000492582 ST20-MTHFSA0A0A6YYL1 179 aa39.79■■■■□ 3.96
CHKB-212ENST00000492582 GPRASP1Q5JY77 1395 aa39.76■■■■□ 3.96
CHKB-212ENST00000492582 LAMC1P11047 1609 aa39.76■■■■□ 3.96
CHKB-212ENST00000492582 EIF2AK4Q9P2K8 1649 aaKnown RBP39.76■■■■□ 3.95
CHKB-212ENST00000492582 POLR3GLQ9BT43 218 aa39.75■■■■□ 3.95
CHKB-212ENST00000492582 VWDEQ8N2E2 1590 aa39.75■■■■□ 3.95
CHKB-212ENST00000492582 TET3O43151 1660 aa39.74■■■■□ 3.95
CHKB-212ENST00000492582 MYT1Q01538 1121 aa39.74■■■■□ 3.95
CHKB-212ENST00000492582 TRPM2O94759 1503 aa39.74■■■■□ 3.95
CHKB-212ENST00000492582 HNRNPUQ00839 825 aaKnown RBP eCLIP39.72■■■■□ 3.95
CHKB-212ENST00000492582 SPHKAPQ2M3C7 1700 aa39.7■■■■□ 3.95
CHKB-212ENST00000492582 PTPRTO14522 1441 aa39.69■■■■□ 3.94
CHKB-212ENST00000492582 MRS2Q9HD23 443 aa39.68■■■■□ 3.94
CHKB-212ENST00000492582 KANK1Q14678 1352 aa39.67■■■■□ 3.94
CHKB-212ENST00000492582 KIDINS220Q9ULH0 1771 aa39.67■■■■□ 3.94
CHKB-212ENST00000492582 PRDM15P57071 1507 aaPredicted RBP39.67■■■■□ 3.94
CHKB-212ENST00000492582 NBPF1Q3BBV0 1214 aa39.67■■■■□ 3.94
CHKB-212ENST00000492582 CFAP74Q9C0B2 1584 aa39.66■■■■□ 3.94
CHKB-212ENST00000492582 MROH1Q8NDA8 1641 aa39.65■■■■□ 3.94
CHKB-212ENST00000492582 MYT1LQ9UL68 1186 aa39.65■■■■□ 3.94
CHKB-212ENST00000492582 ZNF518AQ6AHZ1 1483 aa39.65■■■■□ 3.94
CHKB-212ENST00000492582 CEP152O94986 1710 aa39.63■■■■□ 3.94
CHKB-212ENST00000492582 KIF3BO15066 747 aa39.63■■■■□ 3.93
CHKB-212ENST00000492582 CD109Q6YHK3 1445 aa39.62■■■■□ 3.93
CHKB-212ENST00000492582 CLTCL1P53675 1640 aa39.61■■■■□ 3.93
CHKB-212ENST00000492582 RNF17Q9BXT8 1623 aaKnown RBP39.59■■■■□ 3.93
CHKB-212ENST00000492582 FAM9BQ8IZU0 186 aa39.54■■■■□ 3.92
CHKB-212ENST00000492582 MADDQ8WXG6 1647 aa39.54■■■■□ 3.92
CHKB-212ENST00000492582 POGZQ7Z3K3 1410 aa39.53■■■■□ 3.92
CHKB-212ENST00000492582 FKBP8Q14318 412 aa39.5■■■■□ 3.91
CHKB-212ENST00000492582 COL17A1Q9UMD9 1497 aaPredicted RBP39.49■■■■□ 3.91
CHKB-212ENST00000492582 EFCAB6Q5THR3 1501 aa39.46■■■■□ 3.91
CHKB-212ENST00000492582 NEURL4Q96JN8 1562 aa39.46■■■■□ 3.91
CHKB-212ENST00000492582 MLH3Q9UHC1 1453 aa39.45■■■■□ 3.91
CHKB-212ENST00000492582 NEFLP07196 543 aa39.44■■■■□ 3.9
CHKB-212ENST00000492582 TESK2Q96S53 571 aa39.44■■■■□ 3.9
CHKB-212ENST00000492582 STAC3Q96MF2 364 aa39.44■■■■□ 3.9
CHKB-212ENST00000492582 LMTK2Q8IWU2 1503 aa39.43■■■■□ 3.9
CHKB-212ENST00000492582 HECW2Q9P2P5 1572 aa39.43■■■■□ 3.9
CHKB-212ENST00000492582 CNGB1Q14028 1251 aaPredicted RBP39.41■■■■□ 3.9
CHKB-212ENST00000492582 PPRC1Q5VV67 1664 aaKnown RBP39.4■■■■□ 3.9
CHKB-212ENST00000492582 FRMPD1Q5SYB0 1578 aa39.39■■■■□ 3.9
CHKB-212ENST00000492582 DISP3Q9P2K9 1392 aa39.38■■■■□ 3.9
CHKB-212ENST00000492582 KTN1Q86UP2 1357 aaKnown RBP39.38■■■■□ 3.89
CHKB-212ENST00000492582 NEO1Q92859 1461 aa39.37■■■■□ 3.89
CHKB-212ENST00000492582 ZBED9Q6R2W3 1325 aa39.37■■■■□ 3.89
CHKB-212ENST00000492582 IQGAP1P46940 1657 aa39.37■■■■□ 3.89
CHKB-212ENST00000492582 UGGT1Q9NYU2 1555 aa39.33■■■■□ 3.89
CHKB-212ENST00000492582 ABCA6Q8N139 1617 aa39.31■■■■□ 3.88
CHKB-212ENST00000492582 RALBP1Q15311 655 aa39.3■■■■□ 3.88
CHKB-212ENST00000492582 BCANQ96GW7 911 aa39.29■■■■□ 3.88
CHKB-212ENST00000492582 TMF1P82094 1093 aa39.29■■■■□ 3.88
CHKB-212ENST00000492582 KIF1BO60333 1816 aa39.27■■■■□ 3.88
CHKB-212ENST00000492582 KIAA1210Q9ULL0 1709 aa39.27■■■■□ 3.88
CHKB-212ENST00000492582 MYBBP1AQ9BQG0 1328 aaKnown RBP39.27■■■■□ 3.88
CHKB-212ENST00000492582 MYOM2P54296 1465 aa39.25■■■■□ 3.87
CHKB-212ENST00000492582 SCAF11Q99590 1463 aaKnown RBP39.25■■■■□ 3.87
CHKB-212ENST00000492582 BRD4O60885 1362 aaPredicted RBP39.23■■■■□ 3.87
CHKB-212ENST00000492582 PER1O15534 1290 aaPredicted RBP39.23■■■■□ 3.87
CHKB-212ENST00000492582 MAP3K4Q9Y6R4 1608 aa39.22■■■■□ 3.87
CHKB-212ENST00000492582 TMC1Q8TDI8 760 aa39.21■■■■□ 3.87
CHKB-212ENST00000492582 PNISRQ8TF01 805 aaKnown RBP39.21■■■■□ 3.87
CHKB-212ENST00000492582 IFT172Q9UG01 1749 aa39.21■■■■□ 3.87
CHKB-212ENST00000492582 MROH2AA6NES4 1674 aa39.2■■■■□ 3.87
CHKB-212ENST00000492582 PARD3Q8TEW0 1356 aa39.2■■■■□ 3.87
CHKB-212ENST00000492582 DIP2BQ9P265 1576 aa39.17■■■■□ 3.86
CHKB-212ENST00000492582 NPATQ14207 1427 aa39.17■■■■□ 3.86
CHKB-212ENST00000492582 RAPGEF3O95398 923 aa39.16■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms