RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.94
MCF2L-229ENST00000488765 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
MCF2L-229ENST00000488765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.932e-8■□□□□ 8.9
MCF2L-229ENST00000488765 CC2D1BQ5T0F9 858 aaKnown RBP20.87■□□□□ 0.93
MCF2L-229ENST00000488765 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
MCF2L-229ENST00000488765 ESPNB1AK53 854 aa20.85■□□□□ 0.93
MCF2L-229ENST00000488765 FAM13BQ9NYF5 915 aa20.85■□□□□ 0.93
MCF2L-229ENST00000488765 SAMD9Q5K651 1589 aa20.84■□□□□ 0.93
MCF2L-229ENST00000488765 MYH16Q9H6N6 1097 aa20.84■□□□□ 0.93
MCF2L-229ENST00000488765 KTN1Q86UP2 1357 aaKnown RBP20.84■□□□□ 0.93
MCF2L-229ENST00000488765 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
MCF2L-229ENST00000488765 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
MCF2L-229ENST00000488765 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
MCF2L-229ENST00000488765 TRIM44Q96DX7 344 aaPredicted RBP20.83■□□□□ 0.92
MCF2L-229ENST00000488765 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.92
MCF2L-229ENST00000488765 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
MCF2L-229ENST00000488765 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
MCF2L-229ENST00000488765 CENPQQ7L2Z9 268 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-229ENST00000488765 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
MCF2L-229ENST00000488765 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-229ENST00000488765 KDM2BQ8NHM5 1336 aa20.81■□□□□ 0.92
MCF2L-229ENST00000488765 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
MCF2L-229ENST00000488765 SUPT6HQ7KZ85 1726 aaKnown RBP20.8■□□□□ 0.92
MCF2L-229ENST00000488765 AAMPQ13685 434 aa20.8■□□□□ 0.92
MCF2L-229ENST00000488765 PKD2Q13563 968 aa20.8■□□□□ 0.92
MCF2L-229ENST00000488765 KIAA1211Q6ZU35 1233 aa20.8■□□□□ 0.92
MCF2L-229ENST00000488765 EHBP1L1Q8N3D4 1523 aa20.79■□□□□ 0.92
MCF2L-229ENST00000488765 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
MCF2L-229ENST00000488765 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
MCF2L-229ENST00000488765 BECN1Q14457 450 aa20.79■□□□□ 0.92
MCF2L-229ENST00000488765 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
MCF2L-229ENST00000488765 USP19O94966 1318 aa20.78■□□□□ 0.92
MCF2L-229ENST00000488765 RGL3Q3MIN7 710 aa20.77■□□□□ 0.92
MCF2L-229ENST00000488765 USP47Q96K76 1375 aa20.77■□□□□ 0.92
MCF2L-229ENST00000488765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.91
MCF2L-229ENST00000488765 TRAK2O60296 914 aa20.76■□□□□ 0.91
MCF2L-229ENST00000488765 NUP153P49790 1475 aaKnown RBP20.76■□□□□ 0.91
MCF2L-229ENST00000488765 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
MCF2L-229ENST00000488765 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
MCF2L-229ENST00000488765 PRDM4Q9UKN5 801 aa20.76■□□□□ 0.91
MCF2L-229ENST00000488765 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
MCF2L-229ENST00000488765 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
MCF2L-229ENST00000488765 IGHDP01880 384 aa20.75■□□□□ 0.91
MCF2L-229ENST00000488765 PDCL3Q9H2J4 239 aa20.75■□□□□ 0.91
MCF2L-229ENST00000488765 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
MCF2L-229ENST00000488765 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-229ENST00000488765 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
MCF2L-229ENST00000488765 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
MCF2L-229ENST00000488765 MCM4P33991 863 aa20.73■□□□□ 0.91
MCF2L-229ENST00000488765 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
MCF2L-229ENST00000488765 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
MCF2L-229ENST00000488765 KDM6BO15054 1643 aa20.72■□□□□ 0.91
MCF2L-229ENST00000488765 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
MCF2L-229ENST00000488765 FSD2A1L4K1 749 aa20.7■□□□□ 0.9
MCF2L-229ENST00000488765 WDR62O43379 1518 aa20.7■□□□□ 0.9
MCF2L-229ENST00000488765 ABCC5O15440 1437 aa20.7■□□□□ 0.9
MCF2L-229ENST00000488765 ANTXR1Q9H6X2 564 aa20.7■□□□□ 0.9
MCF2L-229ENST00000488765 FGD1P98174 961 aa20.69■□□□□ 0.9
MCF2L-229ENST00000488765 BCAR3O75815 825 aa20.69■□□□□ 0.9
MCF2L-229ENST00000488765 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
MCF2L-229ENST00000488765 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
MCF2L-229ENST00000488765 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-229ENST00000488765 DAPK1P53355 1430 aa20.68■□□□□ 0.9
MCF2L-229ENST00000488765 PTPRGP23470 1445 aa20.68■□□□□ 0.9
MCF2L-229ENST00000488765 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
MCF2L-229ENST00000488765 GAS2L3Q86XJ1 694 aa20.67■□□□□ 0.9
MCF2L-229ENST00000488765 MRE11P49959 708 aa20.66■□□□□ 0.9
MCF2L-229ENST00000488765 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
MCF2L-229ENST00000488765 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
MCF2L-229ENST00000488765 R3HCC1Q9Y3T6 440 aaKnown RBP20.66■□□□□ 0.9
MCF2L-229ENST00000488765 NUP155O75694 1391 aa20.66■□□□□ 0.9
MCF2L-229ENST00000488765 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
MCF2L-229ENST00000488765 KIF15Q9NS87 1388 aa20.64■□□□□ 0.9
MCF2L-229ENST00000488765 KIAA0556O60303 1618 aa20.64■□□□□ 0.89
MCF2L-229ENST00000488765 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
MCF2L-229ENST00000488765 RALBP1Q15311 655 aa20.63■□□□□ 0.89
MCF2L-229ENST00000488765 BRD4O60885 1362 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-229ENST00000488765 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-229ENST00000488765 CCDC146Q8IYE0 955 aa20.62■□□□□ 0.89
MCF2L-229ENST00000488765 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
MCF2L-229ENST00000488765 CALD1Q05682 793 aaKnown RBP20.61■□□□□ 0.89
MCF2L-229ENST00000488765 RIPK4P57078 832 aa20.61■□□□□ 0.89
MCF2L-229ENST00000488765 PDE4CQ08493 712 aa20.61■□□□□ 0.89
MCF2L-229ENST00000488765 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
MCF2L-229ENST00000488765 COG6Q9Y2V7 657 aa20.61■□□□□ 0.89
MCF2L-229ENST00000488765 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
MCF2L-229ENST00000488765 TPM2P07951 284 aa20.59■□□□□ 0.89
MCF2L-229ENST00000488765 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
MCF2L-229ENST00000488765 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-229ENST00000488765 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-229ENST00000488765 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
MCF2L-229ENST00000488765 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.89
MCF2L-229ENST00000488765 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.88
MCF2L-229ENST00000488765 BCL11BQ9C0K0 894 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-229ENST00000488765 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
MCF2L-229ENST00000488765 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
MCF2L-229ENST00000488765 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
MCF2L-229ENST00000488765 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-229ENST00000488765 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
MCF2L-229ENST00000488765 BCORL1Q5H9F3 1711 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms