RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 QTRT2Q9H974 415 aaKnown RBP11.79□□□□□ -0.52
POLR1C-208ENST00000488601 ABCA8O94911 1581 aa11.78□□□□□ -0.52
POLR1C-208ENST00000488601 AFF2P51816 1311 aa11.78□□□□□ -0.52
POLR1C-208ENST00000488601 AGLP35573 1532 aa11.77□□□□□ -0.52
POLR1C-208ENST00000488601 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
POLR1C-208ENST00000488601 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
POLR1C-208ENST00000488601 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.53
POLR1C-208ENST00000488601 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
POLR1C-208ENST00000488601 MYO3AQ8NEV4 1616 aa11.76□□□□□ -0.53
POLR1C-208ENST00000488601 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
POLR1C-208ENST00000488601 COL13A1Q5TAT6 717 aaPredicted RBP11.76□□□□□ -0.53
POLR1C-208ENST00000488601 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
POLR1C-208ENST00000488601 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
POLR1C-208ENST00000488601 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
POLR1C-208ENST00000488601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
POLR1C-208ENST00000488601 POLR1AO95602 1720 aaPredicted RBP11.74□□□□□ -0.53
POLR1C-208ENST00000488601 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
POLR1C-208ENST00000488601 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
POLR1C-208ENST00000488601 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
POLR1C-208ENST00000488601 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
POLR1C-208ENST00000488601 DEFB132Q7Z7B7 95 aa11.73□□□□□ -0.53
POLR1C-208ENST00000488601 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
POLR1C-208ENST00000488601 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
POLR1C-208ENST00000488601 UTRNP46939 3433 aa11.71□□□□□ -0.54
POLR1C-208ENST00000488601 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
POLR1C-208ENST00000488601 PHLPP1O60346 1717 aa11.7□□□□□ -0.54
POLR1C-208ENST00000488601 ANKLE2Q86XL3 938 aa11.7□□□□□ -0.54
POLR1C-208ENST00000488601 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
POLR1C-208ENST00000488601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
POLR1C-208ENST00000488601 MED14O60244 1454 aa11.7□□□□□ -0.54
POLR1C-208ENST00000488601 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
POLR1C-208ENST00000488601 CFAP74Q9C0B2 1584 aa11.69□□□□□ -0.54
POLR1C-208ENST00000488601 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
POLR1C-208ENST00000488601 NPHP4O75161 1426 aaPredicted RBP11.68□□□□□ -0.54
POLR1C-208ENST00000488601 KDM5CP41229 1560 aa11.67□□□□□ -0.54
POLR1C-208ENST00000488601 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
POLR1C-208ENST00000488601 POLA2Q14181 598 aa11.67□□□□□ -0.54
POLR1C-208ENST00000488601 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
POLR1C-208ENST00000488601 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
POLR1C-208ENST00000488601 ATP10BO94823 1461 aa11.66□□□□□ -0.54
POLR1C-208ENST00000488601 IGF1RP08069 1367 aa11.66□□□□□ -0.54
POLR1C-208ENST00000488601 COL16A1Q07092 1604 aaPredicted RBP11.65□□□□□ -0.54
POLR1C-208ENST00000488601 SCAPERQ9BY12 1400 aa11.65□□□□□ -0.54
POLR1C-208ENST00000488601 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.55
POLR1C-208ENST00000488601 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
POLR1C-208ENST00000488601 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
POLR1C-208ENST00000488601 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
POLR1C-208ENST00000488601 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
POLR1C-208ENST00000488601 RTEL1-TNFRSF6BF6WH68 1400 aa11.61□□□□□ -0.55
POLR1C-208ENST00000488601 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
POLR1C-208ENST00000488601 HSPA6P17066 643 aa11.6□□□□□ -0.55
POLR1C-208ENST00000488601 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
POLR1C-208ENST00000488601 ARID3CA6NKF2 412 aa11.59□□□□□ -0.55
POLR1C-208ENST00000488601 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
POLR1C-208ENST00000488601 R3HDM1Q15032 1099 aaKnown RBP11.59□□□□□ -0.55
POLR1C-208ENST00000488601 PROM2Q8N271 834 aa11.59□□□□□ -0.55
POLR1C-208ENST00000488601 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
POLR1C-208ENST00000488601 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
POLR1C-208ENST00000488601 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
POLR1C-208ENST00000488601 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
POLR1C-208ENST00000488601 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
POLR1C-208ENST00000488601 DIP2CQ9Y2E4 1556 aa11.56□□□□□ -0.56
POLR1C-208ENST00000488601 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
POLR1C-208ENST00000488601 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
POLR1C-208ENST00000488601 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
POLR1C-208ENST00000488601 ABCC1P33527 1531 aa11.53□□□□□ -0.56
POLR1C-208ENST00000488601 CHD4Q14839 1912 aa11.51□□□□□ -0.57
POLR1C-208ENST00000488601 ABCB7O75027 752 aa11.51□□□□□ -0.57
POLR1C-208ENST00000488601 TRPC5Q9UL62 973 aaPredicted RBP11.51□□□□□ -0.57
POLR1C-208ENST00000488601 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
POLR1C-208ENST00000488601 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
POLR1C-208ENST00000488601 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
POLR1C-208ENST00000488601 ZNF518AQ6AHZ1 1483 aa11.49□□□□□ -0.57
POLR1C-208ENST00000488601 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
POLR1C-208ENST00000488601 PLCH2O75038 1416 aa11.47□□□□□ -0.57
POLR1C-208ENST00000488601 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
POLR1C-208ENST00000488601 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
POLR1C-208ENST00000488601 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
POLR1C-208ENST00000488601 WWC3Q9ULE0 1092 aa11.47□□□□□ -0.57
POLR1C-208ENST00000488601 BAG6P46379 1132 aa11.46□□□□□ -0.57
POLR1C-208ENST00000488601 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
POLR1C-208ENST00000488601 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
POLR1C-208ENST00000488601 ABCA6Q8N139 1617 aa11.45□□□□□ -0.58
POLR1C-208ENST00000488601 USP21Q9UK80 565 aa11.44□□□□□ -0.58
POLR1C-208ENST00000488601 AHDC1Q5TGY3 1603 aaPredicted RBP11.43□□□□□ -0.58
POLR1C-208ENST00000488601 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
POLR1C-208ENST00000488601 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
POLR1C-208ENST00000488601 RALGAPBQ86X10 1494 aa11.43□□□□□ -0.58
POLR1C-208ENST00000488601 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
POLR1C-208ENST00000488601 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
POLR1C-208ENST00000488601 UNC13BO14795 1591 aa11.42□□□□□ -0.58
POLR1C-208ENST00000488601 CLTCQ00610 1675 aaKnown RBP11.42□□□□□ -0.58
POLR1C-208ENST00000488601 ATRNO75882 1429 aa11.42□□□□□ -0.58
POLR1C-208ENST00000488601 TNS2Q63HR2 1409 aa11.42□□□□□ -0.58
POLR1C-208ENST00000488601 ITSN2Q9NZM3 1697 aa11.41□□□□□ -0.58
POLR1C-208ENST00000488601 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
POLR1C-208ENST00000488601 KIF14Q15058 1648 aa11.41□□□□□ -0.58
POLR1C-208ENST00000488601 ARHGAP23Q9P227 1491 aa11.4□□□□□ -0.58
POLR1C-208ENST00000488601 FAM135AQ9P2D6 1515 aa11.4□□□□□ -0.59
POLR1C-208ENST00000488601 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms