RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PPARGC1BQ86YN6 1023 aaKnown RBP36.67■■■■□ 3.46
RNF38-208ENST00000488058 EIF2AK4Q9P2K8 1649 aaKnown RBP36.67■■■■□ 3.46
RNF38-208ENST00000488058 DUOX2Q9NRD8 1548 aa36.66■■■■□ 3.46
RNF38-208ENST00000488058 KIF15Q9NS87 1388 aa36.65■■■■□ 3.46
RNF38-208ENST00000488058 WASHC2CQ9Y4E1 1318 aa36.64■■■■□ 3.46
RNF38-208ENST00000488058 RRP7BPQ9NSQ0 103 aa36.64■■■■□ 3.46
RNF38-208ENST00000488058 CHIC2Q9UKJ5 165 aa36.64■■■■□ 3.46
RNF38-208ENST00000488058 RNF17Q9BXT8 1623 aaKnown RBP36.63■■■■□ 3.45
RNF38-208ENST00000488058 PTPRKQ15262 1439 aa36.63■■■■□ 3.45
RNF38-208ENST00000488058 FAM135AQ9P2D6 1515 aa36.62■■■■□ 3.45
RNF38-208ENST00000488058 MYO3AQ8NEV4 1616 aa36.57■■■■□ 3.44
RNF38-208ENST00000488058 ANKRD30AQ9BXX3 1397 aa36.56■■■■□ 3.44
RNF38-208ENST00000488058 ERBINQ96RT1 1412 aa36.53■■■■□ 3.44
RNF38-208ENST00000488058 MROH1Q8NDA8 1641 aa36.52■■■■□ 3.44
RNF38-208ENST00000488058 ZC3H13Q5T200 1668 aaKnown RBP36.51■■■■□ 3.44
RNF38-208ENST00000488058 PZPP20742 1482 aa36.51■■■■□ 3.44
RNF38-208ENST00000488058 STRCQ7RTU9 1775 aa36.51■■■■□ 3.44
RNF38-208ENST00000488058 ABCC3O15438 1527 aa36.5■■■■□ 3.43
RNF38-208ENST00000488058 CEP152O94986 1710 aa36.49■■■■□ 3.43
RNF38-208ENST00000488058 FBXO31Q5XUX0 539 aaPredicted RBP36.49■■■■□ 3.43
RNF38-208ENST00000488058 ZNF142P52746 1687 aaPredicted RBP36.48■■■■□ 3.43
RNF38-208ENST00000488058 CEP170BQ9Y4F5 1589 aaPredicted RBP36.47■■■■□ 3.43
RNF38-208ENST00000488058 NCOA1Q15788 1441 aa36.46■■■■□ 3.43
RNF38-208ENST00000488058 CAMSAP1Q5T5Y3 1602 aa36.45■■■■□ 3.42
RNF38-208ENST00000488058 ADGRL2O95490 1459 aa36.44■■■■□ 3.42
RNF38-208ENST00000488058 TNRQ92752 1358 aa36.44■■■■□ 3.42
RNF38-208ENST00000488058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.43■■■■□ 3.42
RNF38-208ENST00000488058 PRDM15P57071 1507 aaPredicted RBP36.41■■■■□ 3.42
RNF38-208ENST00000488058 DMRT2Q9Y5R5 561 aa36.4■■■■□ 3.42
RNF38-208ENST00000488058 DEPDC5O75140 1603 aa36.38■■■■□ 3.41
RNF38-208ENST00000488058 A2ML1A8K2U0 1454 aa36.37■■■■□ 3.41
RNF38-208ENST00000488058 ITGAEP38570 1179 aa36.35■■■■□ 3.41
RNF38-208ENST00000488058 KANK1Q14678 1352 aa36.35■■■■□ 3.41
RNF38-208ENST00000488058 CFAP65Q6ZU64 1925 aaKnown RBP36.34■■■■□ 3.41
RNF38-208ENST00000488058 ILDR1Q86SU0 546 aaPredicted RBP36.31■■■■□ 3.4
RNF38-208ENST00000488058 ANKRD50Q9ULJ7 1429 aa36.29■■■■□ 3.4
RNF38-208ENST00000488058 ERVK-7P63135 1459 aa36.29■■■■□ 3.4
RNF38-208ENST00000488058 NCKAP5LQ9HCH0 1330 aa36.29■■■■□ 3.4
RNF38-208ENST00000488058 SPATA31D1Q6ZQQ2 1576 aa36.28■■■■□ 3.4
RNF38-208ENST00000488058 PTPRTO14522 1441 aa36.28■■■■□ 3.4
RNF38-208ENST00000488058 PLA2R1Q13018 1463 aa36.27■■■■□ 3.4
RNF38-208ENST00000488058 NLRP1Q9C000 1473 aa36.26■■■■□ 3.4
RNF38-208ENST00000488058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.24■■■■□ 3.39
RNF38-208ENST00000488058 ROCK1Q13464 1354 aa36.21■■■■□ 3.39
RNF38-208ENST00000488058 VWDEQ8N2E2 1590 aa36.21■■■■□ 3.39
RNF38-208ENST00000488058 UGGT1Q9NYU2 1555 aa36.2■■■■□ 3.39
RNF38-208ENST00000488058 ARHGAP31Q2M1Z3 1444 aa36.2■■■■□ 3.39
RNF38-208ENST00000488058 PKD2Q13563 968 aa36.2■■■■□ 3.39
RNF38-208ENST00000488058 LMTK2Q8IWU2 1503 aa36.18■■■■□ 3.38
RNF38-208ENST00000488058 RRBP1Q9P2E9 1410 aaKnown RBP36.17■■■■□ 3.38
RNF38-208ENST00000488058 POLR1AO95602 1720 aaPredicted RBP36.14■■■■□ 3.38
RNF38-208ENST00000488058 THEMISQ8N1K5 641 aaPredicted RBP36.14■■■■□ 3.38
RNF38-208ENST00000488058 CERKQ8TCT0 537 aa36.14■■■■□ 3.38
RNF38-208ENST00000488058 FBXO41Q8TF61 875 aa36.11■■■■□ 3.37
RNF38-208ENST00000488058 EFCAB6Q5THR3 1501 aa36.11■■■■□ 3.37
RNF38-208ENST00000488058 UNC13BO14795 1591 aa36.1■■■■□ 3.37
RNF38-208ENST00000488058 UBR1Q8IWV7 1749 aa36.05■■■■□ 3.36
RNF38-208ENST00000488058 ANKLE2Q86XL3 938 aa36.05■■■■□ 3.36
RNF38-208ENST00000488058 NEURL4Q96JN8 1562 aa36.04■■■■□ 3.36
RNF38-208ENST00000488058 TET3O43151 1660 aa36.03■■■■□ 3.36
RNF38-208ENST00000488058 PIK3C2BO00750 1634 aa36.01■■■■□ 3.35
RNF38-208ENST00000488058 LTBP4Q8N2S1 1624 aa35.99■■■■□ 3.35
RNF38-208ENST00000488058 GCC2Q8IWJ2 1684 aa35.99■■■■□ 3.35
RNF38-208ENST00000488058 SYNMO15061 1565 aa35.98■■■■□ 3.35
RNF38-208ENST00000488058 ZNF335Q9H4Z2 1342 aaPredicted RBP35.98■■■■□ 3.35
RNF38-208ENST00000488058 STAG3Q9UJ98 1225 aa35.97■■■■□ 3.35
RNF38-208ENST00000488058 IQGAP3Q86VI3 1631 aa35.95■■■■□ 3.35
RNF38-208ENST00000488058 RPRD2Q5VT52 1461 aaKnown RBP35.95■■■■□ 3.35
RNF38-208ENST00000488058 NOS1P29475 1434 aa35.95■■■■□ 3.35
RNF38-208ENST00000488058 NPHP4O75161 1426 aaPredicted RBP35.93■■■■□ 3.34
RNF38-208ENST00000488058 NUP155O75694 1391 aa35.93■■■■□ 3.34
RNF38-208ENST00000488058 IDI1Q13907 227 aa35.91■■■■□ 3.34
RNF38-208ENST00000488058 E9PCH4 1651 aa35.9■■■■□ 3.34
RNF38-208ENST00000488058 IQGAP1P46940 1657 aa35.9■■■■□ 3.34
RNF38-208ENST00000488058 MED14O60244 1454 aa35.88■■■■□ 3.33
RNF38-208ENST00000488058 NAIPQ13075 1403 aa35.85■■■■□ 3.33
RNF38-208ENST00000488058 SLIT1O75093 1534 aa35.85■■■■□ 3.33
RNF38-208ENST00000488058 SCAF11Q99590 1463 aaKnown RBP35.85■■■■□ 3.33
RNF38-208ENST00000488058 KDM5AP29375 1690 aaKnown RBP35.84■■■■□ 3.33
RNF38-208ENST00000488058 ARHGAP23Q9P227 1491 aa35.84■■■■□ 3.33
RNF38-208ENST00000488058 TXNDC2Q86VQ3 553 aa35.83■■■■□ 3.33
RNF38-208ENST00000488058 SLC52A1Q9NWF4 448 aa35.83■■■■□ 3.33
RNF38-208ENST00000488058 ADGRB3O60242 1522 aa35.83■■■■□ 3.33
RNF38-208ENST00000488058 EID1Q9Y6B2 187 aa35.81■■■■□ 3.32
RNF38-208ENST00000488058 LTKP29376 864 aa35.8■■■■□ 3.32
RNF38-208ENST00000488058 TMEM2Q9UHN6 1383 aa35.79■■■■□ 3.32
RNF38-208ENST00000488058 IQSEC2Q5JU85 1478 aa35.77■■■■□ 3.32
RNF38-208ENST00000488058 HFM1A2PYH4 1435 aa35.75■■■■□ 3.31
RNF38-208ENST00000488058 MYO5BQ9ULV0 1848 aa35.74■■■■□ 3.31
RNF38-208ENST00000488058 CHGAP10645 457 aaKnown RBP35.72■■■■□ 3.31
RNF38-208ENST00000488058 CPS1P31327 1500 aa35.7■■■■□ 3.31
RNF38-208ENST00000488058 TRIM52Q96A61 297 aa35.7■■■■□ 3.31
RNF38-208ENST00000488058 TMEM131LA2VDJ0 1609 aa35.68■■■■□ 3.3
RNF38-208ENST00000488058 SPHKAPQ2M3C7 1700 aa35.66■■■■□ 3.3
RNF38-208ENST00000488058 STRCP1A6NGW2 1772 aa35.62■■■■□ 3.29
RNF38-208ENST00000488058 BCANQ96GW7 911 aa35.6■■■■□ 3.29
RNF38-208ENST00000488058 SENP3Q9H4L4 574 aaPredicted RBP35.6■■■■□ 3.29
RNF38-208ENST00000488058 RIMS2Q9UQ26 1411 aa35.59■■■■□ 3.29
RNF38-208ENST00000488058 UBAP1LF5GYI3 381 aa35.59■■■■□ 3.29
RNF38-208ENST00000488058 PPP1R15AO75807 674 aaPredicted RBP35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms