RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
PTBP3-208ENST00000487997 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
PTBP3-208ENST00000487997 KDM4FA0A1W2PPD8 638 aa14.73□□□□□ -0.05
PTBP3-208ENST00000487997 C9orf84Q5VXU9 1444 aa14.73□□□□□ -0.05
PTBP3-208ENST00000487997 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
PTBP3-208ENST00000487997 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTBP3-208ENST00000487997 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
PTBP3-208ENST00000487997 INO80Q9ULG1 1556 aaPredicted RBP14.72□□□□□ -0.05
PTBP3-208ENST00000487997 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.05
PTBP3-208ENST00000487997 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.05
PTBP3-208ENST00000487997 ARHGEF5Q12774 1597 aa14.71□□□□□ -0.05
PTBP3-208ENST00000487997 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.05
PTBP3-208ENST00000487997 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
PTBP3-208ENST00000487997 ADAMTSL3P82987 1691 aa14.7□□□□□ -0.06
PTBP3-208ENST00000487997 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
PTBP3-208ENST00000487997 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
PTBP3-208ENST00000487997 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
PTBP3-208ENST00000487997 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
PTBP3-208ENST00000487997 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
PTBP3-208ENST00000487997 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
PTBP3-208ENST00000487997 FGD6Q6ZV73 1430 aa14.67□□□□□ -0.06
PTBP3-208ENST00000487997 MLECQ14165 292 aa14.67□□□□□ -0.06
PTBP3-208ENST00000487997 RTEL1-TNFRSF6BF6WH68 1400 aa14.66□□□□□ -0.06
PTBP3-208ENST00000487997 MADDQ8WXG6 1647 aa14.66□□□□□ -0.06
PTBP3-208ENST00000487997 CROCC2H7BZ55 1655 aa14.66□□□□□ -0.06
PTBP3-208ENST00000487997 RIMS1Q86UR5 1692 aaKnown RBP14.66□□□□□ -0.06
PTBP3-208ENST00000487997 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
PTBP3-208ENST00000487997 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
PTBP3-208ENST00000487997 A2MP01023 1474 aa14.63□□□□□ -0.07
PTBP3-208ENST00000487997 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
PTBP3-208ENST00000487997 AGLP35573 1532 aa14.63□□□□□ -0.07
PTBP3-208ENST00000487997 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
PTBP3-208ENST00000487997 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
PTBP3-208ENST00000487997 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
PTBP3-208ENST00000487997 PLXNC1O60486 1568 aa14.6□□□□□ -0.07
PTBP3-208ENST00000487997 PTPRMP28827 1452 aa14.59□□□□□ -0.07
PTBP3-208ENST00000487997 DAPK1P53355 1430 aa14.58□□□□□ -0.07
PTBP3-208ENST00000487997 ABCC5O15440 1437 aa14.58□□□□□ -0.08
PTBP3-208ENST00000487997 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
PTBP3-208ENST00000487997 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
PTBP3-208ENST00000487997 GGT6Q6P531 493 aa14.55□□□□□ -0.08
PTBP3-208ENST00000487997 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
PTBP3-208ENST00000487997 KIF3BO15066 747 aa14.54□□□□□ -0.08
PTBP3-208ENST00000487997 DUOX2Q9NRD8 1548 aa14.54□□□□□ -0.08
PTBP3-208ENST00000487997 EIF2AK4Q9P2K8 1649 aaKnown RBP14.54□□□□□ -0.08
PTBP3-208ENST00000487997 MROH2AA6NES4 1674 aa14.54□□□□□ -0.08
PTBP3-208ENST00000487997 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
PTBP3-208ENST00000487997 C3P01024 1663 aa14.53□□□□□ -0.08
PTBP3-208ENST00000487997 ANKRD30AQ9BXX3 1397 aa14.53□□□□□ -0.08
PTBP3-208ENST00000487997 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
PTBP3-208ENST00000487997 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
PTBP3-208ENST00000487997 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
PTBP3-208ENST00000487997 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.09
PTBP3-208ENST00000487997 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
PTBP3-208ENST00000487997 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
PTBP3-208ENST00000487997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTBP3-208ENST00000487997 ITGAEP38570 1179 aa14.49□□□□□ -0.09
PTBP3-208ENST00000487997 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
PTBP3-208ENST00000487997 PREX1Q8TCU6 1659 aa14.48□□□□□ -0.09
PTBP3-208ENST00000487997 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
PTBP3-208ENST00000487997 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
PTBP3-208ENST00000487997 NCOA1Q15788 1441 aa14.47□□□□□ -0.09
PTBP3-208ENST00000487997 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
PTBP3-208ENST00000487997 RRBP1Q9P2E9 1410 aaKnown RBP14.47□□□□□ -0.09
PTBP3-208ENST00000487997 CFAP65Q6ZU64 1925 aaKnown RBP14.47□□□□□ -0.09
PTBP3-208ENST00000487997 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.09
PTBP3-208ENST00000487997 WASHC2CQ9Y4E1 1318 aa14.46□□□□□ -0.09
PTBP3-208ENST00000487997 ZC3H13Q5T200 1668 aaKnown RBP14.46□□□□□ -0.09
PTBP3-208ENST00000487997 CEP152O94986 1710 aa14.46□□□□□ -0.1
PTBP3-208ENST00000487997 KDM5DQ9BY66 1539 aa14.46□□□□□ -0.1
PTBP3-208ENST00000487997 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
PTBP3-208ENST00000487997 ZMYM3Q14202 1370 aa14.45□□□□□ -0.1
PTBP3-208ENST00000487997 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
PTBP3-208ENST00000487997 DEPDC5O75140 1603 aa14.42□□□□□ -0.1
PTBP3-208ENST00000487997 HAX1O00165 279 aa14.42□□□□□ -0.1
PTBP3-208ENST00000487997 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
PTBP3-208ENST00000487997 KANK1Q14678 1352 aa14.42□□□□□ -0.1
PTBP3-208ENST00000487997 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
PTBP3-208ENST00000487997 MROH1Q8NDA8 1641 aa14.41□□□□□ -0.1
PTBP3-208ENST00000487997 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
PTBP3-208ENST00000487997 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
PTBP3-208ENST00000487997 PRDM15P57071 1507 aaPredicted RBP14.4□□□□□ -0.1
PTBP3-208ENST00000487997 ABCC3O15438 1527 aa14.39□□□□□ -0.11
PTBP3-208ENST00000487997 NPATQ14207 1427 aa14.39□□□□□ -0.11
PTBP3-208ENST00000487997 UHRF1BP1Q6BDS2 1440 aa14.39□□□□□ -0.11
PTBP3-208ENST00000487997 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
PTBP3-208ENST00000487997 LMTK3Q96Q04 1460 aa14.38□□□□□ -0.11
PTBP3-208ENST00000487997 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
PTBP3-208ENST00000487997 PZPP20742 1482 aa14.36□□□□□ -0.11
PTBP3-208ENST00000487997 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
PTBP3-208ENST00000487997 EVX2Q03828 476 aa14.35□□□□□ -0.11
PTBP3-208ENST00000487997 UNC13BO14795 1591 aa14.34□□□□□ -0.11
PTBP3-208ENST00000487997 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.11
PTBP3-208ENST00000487997 HSPA2P54652 639 aa14.32□□□□□ -0.12
PTBP3-208ENST00000487997 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
PTBP3-208ENST00000487997 TET3O43151 1660 aa14.31□□□□□ -0.12
PTBP3-208ENST00000487997 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
PTBP3-208ENST00000487997 TNRQ92752 1358 aa14.31□□□□□ -0.12
PTBP3-208ENST00000487997 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
PTBP3-208ENST00000487997 LMTK2Q8IWU2 1503 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms