RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-224ENST00000487913 PLEKHH2Q8IVE3 1493 aa22.16■■□□□ 1.14
NR1H3-224ENST00000487913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.16■■□□□ 1.14
NR1H3-224ENST00000487913 ANKLE2Q86XL3 938 aa22.15■■□□□ 1.14
NR1H3-224ENST00000487913 RGS17Q9UGC6 210 aaPredicted RBP22.14■■□□□ 1.13
NR1H3-224ENST00000487913 ADGBQ8N7X0 1667 aa22.13■■□□□ 1.13
NR1H3-224ENST00000487913 NPHP4O75161 1426 aaPredicted RBP22.13■■□□□ 1.13
NR1H3-224ENST00000487913 PZPP20742 1482 aa22.1■■□□□ 1.13
NR1H3-224ENST00000487913 FYCO1Q9BQS8 1478 aa22.1■■□□□ 1.13
NR1H3-224ENST00000487913 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
NR1H3-224ENST00000487913 MED14O60244 1454 aa22.09■■□□□ 1.13
NR1H3-224ENST00000487913 ZNF644Q9H582 1327 aaPredicted RBP22.09■■□□□ 1.13
NR1H3-224ENST00000487913 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
NR1H3-224ENST00000487913 LRRC7Q96NW7 1537 aa22.08■■□□□ 1.13
NR1H3-224ENST00000487913 DHX29Q7Z478 1369 aaKnown RBP22.07■■□□□ 1.12
NR1H3-224ENST00000487913 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
NR1H3-224ENST00000487913 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
NR1H3-224ENST00000487913 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
NR1H3-224ENST00000487913 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
NR1H3-224ENST00000487913 MBD5Q9P267 1494 aa22.05■■□□□ 1.12
NR1H3-224ENST00000487913 KIF3BO15066 747 aa22.05■■□□□ 1.12
NR1H3-224ENST00000487913 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
NR1H3-224ENST00000487913 RNF17Q9BXT8 1623 aaKnown RBP22.04■■□□□ 1.12
NR1H3-224ENST00000487913 FAM135AQ9P2D6 1515 aa22.04■■□□□ 1.12
NR1H3-224ENST00000487913 NLRP1Q9C000 1473 aa22.03■■□□□ 1.12
NR1H3-224ENST00000487913 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
NR1H3-224ENST00000487913 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
NR1H3-224ENST00000487913 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
NR1H3-224ENST00000487913 SYNMO15061 1565 aa21.99■■□□□ 1.11
NR1H3-224ENST00000487913 POTEAQ6S8J7 498 aa21.97■■□□□ 1.11
NR1H3-224ENST00000487913 TIAM1Q13009 1591 aa21.96■■□□□ 1.11
NR1H3-224ENST00000487913 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
NR1H3-224ENST00000487913 ZC3H13Q5T200 1668 aaKnown RBP21.9■■□□□ 1.1
NR1H3-224ENST00000487913 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.09
NR1H3-224ENST00000487913 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
NR1H3-224ENST00000487913 ERVK-7P63135 1459 aa21.84■■□□□ 1.09
NR1H3-224ENST00000487913 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
NR1H3-224ENST00000487913 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
NR1H3-224ENST00000487913 ABCC3O15438 1527 aa21.84■■□□□ 1.09
NR1H3-224ENST00000487913 LTKP29376 864 aa21.83■■□□□ 1.09
NR1H3-224ENST00000487913 EHBP1L1Q8N3D4 1523 aa21.83■■□□□ 1.09
NR1H3-224ENST00000487913 XIRP1Q702N8 1843 aaKnown RBP21.83■■□□□ 1.08
NR1H3-224ENST00000487913 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
NR1H3-224ENST00000487913 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
NR1H3-224ENST00000487913 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
NR1H3-224ENST00000487913 SETD1AO15047 1707 aaKnown RBP21.81■■□□□ 1.08
NR1H3-224ENST00000487913 UBR1Q8IWV7 1749 aa21.8■■□□□ 1.08
NR1H3-224ENST00000487913 TXNDC2Q86VQ3 553 aa21.79■■□□□ 1.08
NR1H3-224ENST00000487913 ARHGAP23Q9P227 1491 aa21.78■■□□□ 1.08
NR1H3-224ENST00000487913 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
NR1H3-224ENST00000487913 SLIT1O75093 1534 aa21.75■■□□□ 1.07
NR1H3-224ENST00000487913 TMEM94Q12767 1356 aa21.75■■□□□ 1.07
NR1H3-224ENST00000487913 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
NR1H3-224ENST00000487913 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
NR1H3-224ENST00000487913 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
NR1H3-224ENST00000487913 ARHGEF5Q12774 1597 aa21.73■■□□□ 1.07
NR1H3-224ENST00000487913 MROH1Q8NDA8 1641 aa21.73■■□□□ 1.07
NR1H3-224ENST00000487913 RBM33Q96EV2 1170 aaKnown RBP21.71■■□□□ 1.07
NR1H3-224ENST00000487913 EID1Q9Y6B2 187 aa21.7■■□□□ 1.06
NR1H3-224ENST00000487913 MAP3K1Q13233 1512 aa21.7■■□□□ 1.06
NR1H3-224ENST00000487913 CEP152O94986 1710 aa21.67■■□□□ 1.06
NR1H3-224ENST00000487913 UPF1Q92900 1129 aaKnown RBP eCLIP21.67■■□□□ 1.06
NR1H3-224ENST00000487913 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
NR1H3-224ENST00000487913 TMEM2Q9UHN6 1383 aa21.66■■□□□ 1.06
NR1H3-224ENST00000487913 KCNA6P17658 529 aa21.65■■□□□ 1.06
NR1H3-224ENST00000487913 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
NR1H3-224ENST00000487913 LRRC9Q6ZRR7 1453 aa21.64■■□□□ 1.06
NR1H3-224ENST00000487913 CFAP65Q6ZU64 1925 aaKnown RBP21.64■■□□□ 1.05
NR1H3-224ENST00000487913 JCADQ9P266 1359 aa21.63■■□□□ 1.05
NR1H3-224ENST00000487913 MAST1Q9Y2H9 1570 aa21.63■■□□□ 1.05
NR1H3-224ENST00000487913 SLC26A8Q96RN1 970 aa21.62■■□□□ 1.05
NR1H3-224ENST00000487913 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
NR1H3-224ENST00000487913 ARHGAP31Q2M1Z3 1444 aa21.61■■□□□ 1.05
NR1H3-224ENST00000487913 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-224ENST00000487913 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
NR1H3-224ENST00000487913 PHLPP1O60346 1717 aa21.6■■□□□ 1.05
NR1H3-224ENST00000487913 SLAIN2Q9P270 581 aa21.59■■□□□ 1.05
NR1H3-224ENST00000487913 LRP6O75581 1613 aa21.58■■□□□ 1.05
NR1H3-224ENST00000487913 STAG3Q9UJ98 1225 aa21.58■■□□□ 1.05
NR1H3-224ENST00000487913 TET3O43151 1660 aa21.58■■□□□ 1.05
NR1H3-224ENST00000487913 MSH6P52701 1360 aa21.57■■□□□ 1.04
NR1H3-224ENST00000487913 SRCAPQ6ZRS2 3230 aa21.56■■□□□ 1.04
NR1H3-224ENST00000487913 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
NR1H3-224ENST00000487913 EFCAB6Q5THR3 1501 aa21.55■■□□□ 1.04
NR1H3-224ENST00000487913 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
NR1H3-224ENST00000487913 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
NR1H3-224ENST00000487913 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
NR1H3-224ENST00000487913 IDI1Q13907 227 aa21.53■■□□□ 1.04
NR1H3-224ENST00000487913 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
NR1H3-224ENST00000487913 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
NR1H3-224ENST00000487913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.031e-6■■□□□ 12.5
NR1H3-224ENST00000487913 SPATA31A6Q5VVP1 1343 aa21.51■■□□□ 1.03
NR1H3-224ENST00000487913 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
NR1H3-224ENST00000487913 KDM5AP29375 1690 aaKnown RBP21.48■■□□□ 1.03
NR1H3-224ENST00000487913 FGD6Q6ZV73 1430 aa21.47■■□□□ 1.03
NR1H3-224ENST00000487913 RXRBP28702 533 aa21.46■■□□□ 1.03
NR1H3-224ENST00000487913 BCANQ96GW7 911 aa21.46■■□□□ 1.03
NR1H3-224ENST00000487913 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
NR1H3-224ENST00000487913 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
NR1H3-224ENST00000487913 MYOM3Q5VTT5 1437 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms