RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
APH1A-207ENST00000486308 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
APH1A-207ENST00000486308 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
APH1A-207ENST00000486308 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
APH1A-207ENST00000486308 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
APH1A-207ENST00000486308 ESF1Q9H501 851 aaKnown RBP11.37□□□□□ -0.59
APH1A-207ENST00000486308 C3P01024 1663 aa11.36□□□□□ -0.59
APH1A-207ENST00000486308 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
APH1A-207ENST00000486308 KDM5DQ9BY66 1539 aa11.36□□□□□ -0.59
APH1A-207ENST00000486308 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
APH1A-207ENST00000486308 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
APH1A-207ENST00000486308 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
APH1A-207ENST00000486308 ITGAEP38570 1179 aa11.35□□□□□ -0.59
APH1A-207ENST00000486308 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
APH1A-207ENST00000486308 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
APH1A-207ENST00000486308 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
APH1A-207ENST00000486308 ABCC3O15438 1527 aa11.34□□□□□ -0.59
APH1A-207ENST00000486308 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
APH1A-207ENST00000486308 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
APH1A-207ENST00000486308 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
APH1A-207ENST00000486308 NPATQ14207 1427 aa11.32□□□□□ -0.6
APH1A-207ENST00000486308 VWDEQ8N2E2 1590 aa11.31□□□□□ -0.6
APH1A-207ENST00000486308 PZPP20742 1482 aa11.31□□□□□ -0.6
APH1A-207ENST00000486308 PREX1Q8TCU6 1659 aa11.3□□□□□ -0.6
APH1A-207ENST00000486308 CEP152O94986 1710 aa11.29□□□□□ -0.6
APH1A-207ENST00000486308 NAIPQ13075 1403 aa11.29□□□□□ -0.6
APH1A-207ENST00000486308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
APH1A-207ENST00000486308 LMTK2Q8IWU2 1503 aa11.29□□□□□ -0.6
APH1A-207ENST00000486308 UNC13BO14795 1591 aa11.28□□□□□ -0.6
APH1A-207ENST00000486308 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
APH1A-207ENST00000486308 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
APH1A-207ENST00000486308 KANK1Q14678 1352 aa11.28□□□□□ -0.6
APH1A-207ENST00000486308 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
APH1A-207ENST00000486308 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
APH1A-207ENST00000486308 GCC2Q8IWJ2 1684 aa11.27□□□□□ -0.6
APH1A-207ENST00000486308 SETD1BQ9UPS6 1966 aaKnown RBP11.27□□□□□ -0.61
APH1A-207ENST00000486308 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
APH1A-207ENST00000486308 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
APH1A-207ENST00000486308 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
APH1A-207ENST00000486308 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
APH1A-207ENST00000486308 TNRQ92752 1358 aa11.25□□□□□ -0.61
APH1A-207ENST00000486308 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
APH1A-207ENST00000486308 HSPA2P54652 639 aa11.24□□□□□ -0.61
APH1A-207ENST00000486308 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
APH1A-207ENST00000486308 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
APH1A-207ENST00000486308 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
APH1A-207ENST00000486308 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
APH1A-207ENST00000486308 TET3O43151 1660 aa11.22□□□□□ -0.61
APH1A-207ENST00000486308 NLRP1Q9C000 1473 aa11.21□□□□□ -0.61
APH1A-207ENST00000486308 NUP155O75694 1391 aa11.21□□□□□ -0.61
APH1A-207ENST00000486308 RPRD2Q5VT52 1461 aaKnown RBP11.2□□□□□ -0.62
APH1A-207ENST00000486308 NOS1P29475 1434 aa11.2□□□□□ -0.62
APH1A-207ENST00000486308 SYNMO15061 1565 aa11.19□□□□□ -0.62
APH1A-207ENST00000486308 E9PCH4 1651 aa11.18□□□□□ -0.62
APH1A-207ENST00000486308 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
APH1A-207ENST00000486308 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
APH1A-207ENST00000486308 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
APH1A-207ENST00000486308 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
APH1A-207ENST00000486308 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
APH1A-207ENST00000486308 STRCQ7RTU9 1775 aa11.16□□□□□ -0.62
APH1A-207ENST00000486308 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
APH1A-207ENST00000486308 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
APH1A-207ENST00000486308 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
APH1A-207ENST00000486308 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
APH1A-207ENST00000486308 PTPRTO14522 1441 aa11.13□□□□□ -0.63
APH1A-207ENST00000486308 IDI1Q13907 227 aa11.13□□□□□ -0.63
APH1A-207ENST00000486308 THEMISQ8N1K5 641 aaPredicted RBP11.12□□□□□ -0.63
APH1A-207ENST00000486308 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
APH1A-207ENST00000486308 ADGRB3O60242 1522 aa11.12□□□□□ -0.63
APH1A-207ENST00000486308 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
APH1A-207ENST00000486308 KDM5AP29375 1690 aaKnown RBP11.11□□□□□ -0.63
APH1A-207ENST00000486308 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
APH1A-207ENST00000486308 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
APH1A-207ENST00000486308 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
APH1A-207ENST00000486308 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
APH1A-207ENST00000486308 SLIT1O75093 1534 aa11.1□□□□□ -0.63
APH1A-207ENST00000486308 PKD2Q13563 968 aa11.1□□□□□ -0.63
APH1A-207ENST00000486308 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
APH1A-207ENST00000486308 TRPM2O94759 1503 aa11.09□□□□□ -0.63
APH1A-207ENST00000486308 DMRT2Q9Y5R5 561 aa11.09□□□□□ -0.63
APH1A-207ENST00000486308 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
APH1A-207ENST00000486308 MED14O60244 1454 aa11.08□□□□□ -0.64
APH1A-207ENST00000486308 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
APH1A-207ENST00000486308 ANKLE2Q86XL3 938 aa11.08□□□□□ -0.64
APH1A-207ENST00000486308 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
APH1A-207ENST00000486308 TMEM131LA2VDJ0 1609 aa11.08□□□□□ -0.64
APH1A-207ENST00000486308 CLTCL1P53675 1640 aa11.07□□□□□ -0.64
APH1A-207ENST00000486308 HRCP23327 699 aa11.07□□□□□ -0.64
APH1A-207ENST00000486308 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
APH1A-207ENST00000486308 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
APH1A-207ENST00000486308 LTKP29376 864 aa11.06□□□□□ -0.64
APH1A-207ENST00000486308 FOXD1Q16676 465 aa11.06□□□□□ -0.64
APH1A-207ENST00000486308 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
APH1A-207ENST00000486308 ZFYVE9O95405 1425 aa11.05□□□□□ -0.64
APH1A-207ENST00000486308 MYO5BQ9ULV0 1848 aa11.05□□□□□ -0.64
APH1A-207ENST00000486308 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
APH1A-207ENST00000486308 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
APH1A-207ENST00000486308 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
APH1A-207ENST00000486308 TRIM26Q12899 539 aaPredicted RBP11.03□□□□□ -0.64
APH1A-207ENST00000486308 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms