RNA–Protein interactions for RNA: ENST00000485976.5

NECAB3-212, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 1,016 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-212ENST00000485976 KDM5DQ9BY66 1539 aa34.86■■■■□ 3.17
NECAB3-212ENST00000485976 RNF17Q9BXT8 1623 aaKnown RBP34.86■■■■□ 3.17
NECAB3-212ENST00000485976 HSPA2P54652 639 aa34.81■■■■□ 3.16
NECAB3-212ENST00000485976 KIF15Q9NS87 1388 aa34.81■■■■□ 3.16
NECAB3-212ENST00000485976 ERBINQ96RT1 1412 aa34.79■■■■□ 3.16
NECAB3-212ENST00000485976 PTPRKQ15262 1439 aa34.78■■■■□ 3.16
NECAB3-212ENST00000485976 ZC3H13Q5T200 1668 aaKnown RBP34.77■■■■□ 3.16
NECAB3-212ENST00000485976 WASHC2CQ9Y4E1 1318 aa34.77■■■■□ 3.16
NECAB3-212ENST00000485976 ANKRD30AQ9BXX3 1397 aa34.76■■■■□ 3.16
NECAB3-212ENST00000485976 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
NECAB3-212ENST00000485976 ADGRL2O95490 1459 aa34.72■■■■□ 3.15
NECAB3-212ENST00000485976 PZPP20742 1482 aa34.71■■■■□ 3.15
NECAB3-212ENST00000485976 RRP7BPQ9NSQ0 103 aa34.7■■■■□ 3.15
NECAB3-212ENST00000485976 NCOA1Q15788 1441 aa34.7■■■■□ 3.15
NECAB3-212ENST00000485976 ZNF142P52746 1687 aaPredicted RBP34.7■■■■□ 3.14
NECAB3-212ENST00000485976 MROH1Q8NDA8 1641 aa34.69■■■■□ 3.14
NECAB3-212ENST00000485976 MYO3AQ8NEV4 1616 aa34.69■■■■□ 3.14
NECAB3-212ENST00000485976 ABCC3O15438 1527 aa34.66■■■■□ 3.14
NECAB3-212ENST00000485976 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
NECAB3-212ENST00000485976 CHIC2Q9UKJ5 165 aa34.64■■■■□ 3.14
NECAB3-212ENST00000485976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.63■■■■□ 3.13
NECAB3-212ENST00000485976 DEPDC5O75140 1603 aa34.63■■■■□ 3.13
NECAB3-212ENST00000485976 STRCQ7RTU9 1775 aa34.62■■■■□ 3.13
NECAB3-212ENST00000485976 DMRT2Q9Y5R5 561 aa34.62■■■■□ 3.13
NECAB3-212ENST00000485976 CEP170BQ9Y4F5 1589 aaPredicted RBP34.62■■■■□ 3.13
NECAB3-212ENST00000485976 TNRQ92752 1358 aa34.58■■■■□ 3.13
NECAB3-212ENST00000485976 CEP152O94986 1710 aa34.58■■■■□ 3.13
NECAB3-212ENST00000485976 CAMSAP1Q5T5Y3 1602 aa34.56■■■■□ 3.12
NECAB3-212ENST00000485976 A2ML1A8K2U0 1454 aa34.56■■■■□ 3.12
NECAB3-212ENST00000485976 KANK1Q14678 1352 aa34.54■■■■□ 3.12
NECAB3-212ENST00000485976 PLA2R1Q13018 1463 aa34.53■■■■□ 3.12
NECAB3-212ENST00000485976 ROCK1Q13464 1354 aa34.52■■■■□ 3.12
NECAB3-212ENST00000485976 FBXO31Q5XUX0 539 aaPredicted RBP34.52■■■■□ 3.12
NECAB3-212ENST00000485976 NLRP1Q9C000 1473 aa34.52■■■■□ 3.12
NECAB3-212ENST00000485976 ARHGAP31Q2M1Z3 1444 aa34.51■■■■□ 3.12
NECAB3-212ENST00000485976 SPATA31D1Q6ZQQ2 1576 aa34.51■■■■□ 3.12
NECAB3-212ENST00000485976 PPARGC1BQ86YN6 1023 aaKnown RBP34.51■■■■□ 3.12
NECAB3-212ENST00000485976 PTPRTO14522 1441 aa34.5■■■■□ 3.11
NECAB3-212ENST00000485976 ANKRD50Q9ULJ7 1429 aa34.5■■■■□ 3.11
NECAB3-212ENST00000485976 VWDEQ8N2E2 1590 aa34.48■■■■□ 3.11
NECAB3-212ENST00000485976 LMTK2Q8IWU2 1503 aa34.47■■■■□ 3.11
NECAB3-212ENST00000485976 ERVK-7P63135 1459 aa34.46■■■■□ 3.11
NECAB3-212ENST00000485976 RRBP1Q9P2E9 1410 aaKnown RBP34.46■■■■□ 3.11
NECAB3-212ENST00000485976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.43■■■■□ 3.12e-7■■□□□ 11.7
NECAB3-212ENST00000485976 PKD2Q13563 968 aa34.42■■■■□ 3.1
NECAB3-212ENST00000485976 CFAP65Q6ZU64 1925 aaKnown RBP34.4■■■■□ 3.1
NECAB3-212ENST00000485976 UGGT1Q9NYU2 1555 aa34.37■■■■□ 3.09
NECAB3-212ENST00000485976 THEMISQ8N1K5 641 aaPredicted RBP34.34■■■■□ 3.09
NECAB3-212ENST00000485976 UNC13BO14795 1591 aa34.33■■■■□ 3.09
NECAB3-212ENST00000485976 EFCAB6Q5THR3 1501 aa34.33■■■■□ 3.09
NECAB3-212ENST00000485976 POLR1AO95602 1720 aaPredicted RBP34.31■■■■□ 3.08
NECAB3-212ENST00000485976 ITGAEP38570 1179 aa34.3■■■■□ 3.08
NECAB3-212ENST00000485976 NCKAP5LQ9HCH0 1330 aa34.3■■■■□ 3.08
NECAB3-212ENST00000485976 RPRD2Q5VT52 1461 aaKnown RBP34.28■■■■□ 3.08
NECAB3-212ENST00000485976 TET3O43151 1660 aa34.27■■■■□ 3.08
NECAB3-212ENST00000485976 ILDR1Q86SU0 546 aaPredicted RBP34.24■■■■□ 3.07
NECAB3-212ENST00000485976 GCC2Q8IWJ2 1684 aa34.24■■■■□ 3.07
NECAB3-212ENST00000485976 UBR1Q8IWV7 1749 aa34.23■■■■□ 3.07
NECAB3-212ENST00000485976 ANKLE2Q86XL3 938 aa34.22■■■■□ 3.07
NECAB3-212ENST00000485976 CERKQ8TCT0 537 aa34.22■■■■□ 3.07
NECAB3-212ENST00000485976 FBXO41Q8TF61 875 aa34.22■■■■□ 3.07
NECAB3-212ENST00000485976 KDM5AP29375 1690 aaKnown RBP34.21■■■■□ 3.07
NECAB3-212ENST00000485976 IQGAP3Q86VI3 1631 aa34.2■■■■□ 3.07
NECAB3-212ENST00000485976 NOS1P29475 1434 aa34.2■■■■□ 3.06
NECAB3-212ENST00000485976 NEURL4Q96JN8 1562 aa34.19■■■■□ 3.06
NECAB3-212ENST00000485976 MED14O60244 1454 aa34.16■■■■□ 3.06
NECAB3-212ENST00000485976 SYNMO15061 1565 aa34.15■■■■□ 3.06
NECAB3-212ENST00000485976 PIK3C2BO00750 1634 aa34.14■■■■□ 3.06
NECAB3-212ENST00000485976 LTBP4Q8N2S1 1624 aa34.14■■■■□ 3.06
NECAB3-212ENST00000485976 SLC52A1Q9NWF4 448 aa34.12■■■■□ 3.05
NECAB3-212ENST00000485976 SLIT1O75093 1534 aa34.11■■■■□ 3.05
NECAB3-212ENST00000485976 NUP155O75694 1391 aa34.11■■■■□ 3.05
NECAB3-212ENST00000485976 IQSEC2Q5JU85 1478 aa34.09■■■■□ 3.05
NECAB3-212ENST00000485976 ARHGAP23Q9P227 1491 aa34.09■■■■□ 3.05
NECAB3-212ENST00000485976 NAIPQ13075 1403 aa34.09■■■■□ 3.05
NECAB3-212ENST00000485976 NPHP4O75161 1426 aaPredicted RBP34.08■■■■□ 3.05
NECAB3-212ENST00000485976 E9PCH4 1651 aa34.08■■■■□ 3.05
NECAB3-212ENST00000485976 IQGAP1P46940 1657 aa34.07■■■■□ 3.04
NECAB3-212ENST00000485976 HFM1A2PYH4 1435 aa34.06■■■■□ 3.04
NECAB3-212ENST00000485976 IDI1Q13907 227 aa34.06■■■■□ 3.04
NECAB3-212ENST00000485976 STAG3Q9UJ98 1225 aa34.06■■■■□ 3.04
NECAB3-212ENST00000485976 SCAF11Q99590 1463 aaKnown RBP34.05■■■■□ 3.04
NECAB3-212ENST00000485976 ADGRB3O60242 1522 aa34.04■■■■□ 3.04
NECAB3-212ENST00000485976 ZNF335Q9H4Z2 1342 aaPredicted RBP34.03■■■■□ 3.04
NECAB3-212ENST00000485976 TMEM2Q9UHN6 1383 aa34■■■■□ 3.03
NECAB3-212ENST00000485976 EID1Q9Y6B2 187 aa34■■■■□ 3.03
NECAB3-212ENST00000485976 CPS1P31327 1500 aa33.95■■■■□ 3.03
NECAB3-212ENST00000485976 TXNDC2Q86VQ3 553 aa33.95■■■■□ 3.03
NECAB3-212ENST00000485976 LTKP29376 864 aa33.92■■■■□ 3.02
NECAB3-212ENST00000485976 TMEM131LA2VDJ0 1609 aa33.9■■■■□ 3.02
NECAB3-212ENST00000485976 SPHKAPQ2M3C7 1700 aa33.89■■■■□ 3.02
NECAB3-212ENST00000485976 MYO5BQ9ULV0 1848 aa33.87■■■■□ 3.01
NECAB3-212ENST00000485976 HDGFP51858 240 aaKnown RBP33.84■■■■□ 3.01
NECAB3-212ENST00000485976 ACIN1Q9UKV3 1341 aaKnown RBP33.8■■■■□ 3
NECAB3-212ENST00000485976 ZFYVE9O95405 1425 aa33.8■■■■□ 3
NECAB3-212ENST00000485976 TRIM52Q96A61 297 aa33.79■■■■□ 3
NECAB3-212ENST00000485976 RIMS2Q9UQ26 1411 aa33.77■■■■□ 3
NECAB3-212ENST00000485976 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.76■■■□□ 2.99
NECAB3-212ENST00000485976 TRPM2O94759 1503 aa33.75■■■□□ 2.99
NECAB3-212ENST00000485976 CHGAP10645 457 aaKnown RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms