RNA–Protein interactions for RNA: ENST00000485976.5

NECAB3-212, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 1,016 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-212ENST00000485976 CDC40O60508 579 aaKnown RBP eCLIP20.74■□□□□ 0.918e-13■■□□□ 14.2
NECAB3-212ENST00000485976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.4■■□□□ 1.52e-12■□□□□ 9.7
NECAB3-212ENST00000485976 FKBP4Q02790 459 aaKnown RBP eCLIP28.93■■■□□ 2.221e-11■■■■■ 50.7
NECAB3-212ENST00000485976 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.74■■□□□ 1.713e-11■■□□□ 11.8
NECAB3-212ENST00000485976 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.63■■□□□ 1.854e-11■■□□□ 12
NECAB3-212ENST00000485976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.57■■■□□ 29e-11■■□□□ 12.2
NECAB3-212ENST00000485976 SRSF1Q07955 248 aaKnown RBP eCLIP21.03■□□□□ 0.961e-10■■□□□ 14.5
NECAB3-212ENST00000485976 SF3B4Q15427 424 aaKnown RBP eCLIP20.59■□□□□ 0.892e-10■■■■■ 27.7
NECAB3-212ENST00000485976 EFTUD2Q15029 972 aaKnown RBP eCLIP21.33■■□□□ 1.012e-10■■■□□ 17.8
NECAB3-212ENST00000485976 U2AF2P26368 475 aaKnown RBP eCLIP25.24■■□□□ 1.635e-10■□□□□ 11.1
NECAB3-212ENST00000485976 PPIGQ13427 754 aaKnown RBP eCLIP25.86■■□□□ 1.736e-10■■■■□ 20.2
NECAB3-212ENST00000485976 SRSF7Q16629 238 aaKnown RBP eCLIP17.81■□□□□ 0.448e-10■□□□□ 9.8
NECAB3-212ENST00000485976 LSM11P83369 360 aaKnown RBP eCLIP19.51■□□□□ 0.712e-9■■■■■ 33.8
NECAB3-212ENST00000485976 RBFOX2O43251 390 aaKnown RBP eCLIP17.45■□□□□ 0.382e-9■■■■□ 19.7
NECAB3-212ENST00000485976 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.3■□□□□ 0.684e-9■■■□□ 15.2
NECAB3-212ENST00000485976 HNRNPKP61978 463 aaKnown RBP eCLIP22.7■■□□□ 1.221e-8■■■■■ 28.7
NECAB3-212ENST00000485976 EIF4G2P78344 907 aaKnown RBP eCLIP31.42■■■□□ 2.621e-8■■■■■ 29.7
NECAB3-212ENST00000485976 AATFQ9NY61 560 aaKnown RBP eCLIP27.42■■□□□ 1.982e-8■■■■□ 22.6
NECAB3-212ENST00000485976 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.12■□□□□ 0.974e-8■□□□□ 9.8
NECAB3-212ENST00000485976 AQRO60306 1485 aaKnown RBP eCLIP39.7■■■■□ 3.954e-8■■■■■ 28.5
NECAB3-212ENST00000485976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.8■□□□□ 0.66e-8■□□□□ 8.3
NECAB3-212ENST00000485976 PABPN1Q86U42 306 aaKnown RBP eCLIP45.11■■■■■ 4.818e-8■■□□□ 11.7
NECAB3-212ENST00000485976 PABPC4Q13310 644 aaKnown RBP eCLIP27.14■■□□□ 1.949e-8■■■■■ 50.6
NECAB3-212ENST00000485976 RBM5P52756 815 aaKnown RBP eCLIP27.9■■■□□ 2.061e-7■■□□□ 11.5
NECAB3-212ENST00000485976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.43■■■■□ 3.12e-7■■□□□ 11.7
NECAB3-212ENST00000485976 PCBP2Q15366 365 aaKnown RBP eCLIP21.21■□□□□ 0.993e-7■■□□□ 12.6
NECAB3-212ENST00000485976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.08■■□□□ 1.293e-7■□□□□ 8.6
NECAB3-212ENST00000485976 NKRFO15226 690 aaKnown RBP eCLIP26.11■■□□□ 1.773e-7■■■■□ 24.1
NECAB3-212ENST00000485976 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.16■□□□□ 0.984e-7■■■■■ 58.1
NECAB3-212ENST00000485976 PCBP1Q15365 356 aaKnown RBP eCLIP25.11■■□□□ 1.614e-7■■■■□ 21.8
NECAB3-212ENST00000485976 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.32■■□□□ 1.964e-7■■■■□ 19.8
NECAB3-212ENST00000485976 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■□□ 17.2
NECAB3-212ENST00000485976 SF3A3Q12874 501 aaKnown RBP eCLIP19.85■□□□□ 0.777e-7■■■□□ 18.1
NECAB3-212ENST00000485976 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.187e-7■■■■□ 19.4
NECAB3-212ENST00000485976 NONOQ15233 471 aaKnown RBP eCLIP25.55■■□□□ 1.688e-7■■■■□ 24.1
NECAB3-212ENST00000485976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.43■■■■□ 3.428e-7■■■■□ 22.1
NECAB3-212ENST00000485976 GTF2F1P35269 517 aaKnown RBP eCLIP24.79■■□□□ 1.568e-7■■■■□ 24.7
NECAB3-212ENST00000485976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■■□□□ 12
NECAB3-212ENST00000485976 ZNF622Q969S3 477 aaKnown RBP eCLIP29.2■■■□□ 2.261e-6■■□□□ 14.2
NECAB3-212ENST00000485976 PRPF4O43172 522 aaKnown RBP eCLIP21.52■■□□□ 1.042e-6■■■□□ 16
NECAB3-212ENST00000485976 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.27■■□□□ 12e-6■■■■■ 163.7
NECAB3-212ENST00000485976 EWSR1Q01844 656 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■□□ 15.7
NECAB3-212ENST00000485976 TIA1P31483 386 aaKnown RBP eCLIP20.83■□□□□ 0.932e-6■■■□□ 17.6
NECAB3-212ENST00000485976 TARDBPQ13148 414 aaKnown RBP eCLIP22.45■■□□□ 1.182e-6■■■■□ 22.1
NECAB3-212ENST00000485976 U2AF1Q01081 240 aaKnown RBP eCLIP30.11■■■□□ 2.412e-6■■□□□ 12.5
NECAB3-212ENST00000485976 SMNDC1O75940 238 aaKnown RBP eCLIP20.2■□□□□ 0.824e-6■■□□□ 12.4
NECAB3-212ENST00000485976 SFPQP23246 707 aaKnown RBP eCLIP25.16■■□□□ 1.624e-6■■■□□ 17.5
NECAB3-212ENST00000485976 GPKOWQ92917 476 aaPredicted RBP eCLIP25.88■■□□□ 1.734e-6■□□□□ 10.4
NECAB3-212ENST00000485976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.88■■□□□ 1.414e-6■■■■■ 78.5
NECAB3-212ENST00000485976 RBM22Q9NW64 420 aaKnown RBP eCLIP22.63■■□□□ 1.218e-6■■□□□ 12.7
NECAB3-212ENST00000485976 PUS1Q9Y606 427 aaKnown RBP eCLIP16.85■□□□□ 0.291e-5■■■■■ 49.7
Retrieved 51 of 51 RNA–protein pairs in 9.9 ms