RNA–Protein interactions for RNA: ENST00000484998.5

NOP56-214, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 5

Gene NOP56, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-214ENST00000484998 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
NOP56-214ENST00000484998 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
NOP56-214ENST00000484998 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
NOP56-214ENST00000484998 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
NOP56-214ENST00000484998 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
NOP56-214ENST00000484998 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
NOP56-214ENST00000484998 MED14O60244 1454 aa12.96□□□□□ -0.34
NOP56-214ENST00000484998 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
NOP56-214ENST00000484998 KIF3BO15066 747 aa12.95□□□□□ -0.34
NOP56-214ENST00000484998 KIAA1107Q9UPP5 1409 aa12.95□□□□□ -0.34
NOP56-214ENST00000484998 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
NOP56-214ENST00000484998 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
NOP56-214ENST00000484998 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
NOP56-214ENST00000484998 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
NOP56-214ENST00000484998 DHX29Q7Z478 1369 aaKnown RBP12.92□□□□□ -0.34
NOP56-214ENST00000484998 PZPP20742 1482 aa12.91□□□□□ -0.34
NOP56-214ENST00000484998 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
NOP56-214ENST00000484998 UGGT1Q9NYU2 1555 aa12.91□□□□□ -0.34
NOP56-214ENST00000484998 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
NOP56-214ENST00000484998 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
NOP56-214ENST00000484998 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
NOP56-214ENST00000484998 IQGAP1P46940 1657 aa12.9□□□□□ -0.34
NOP56-214ENST00000484998 PLEKHH2Q8IVE3 1493 aa12.9□□□□□ -0.34
NOP56-214ENST00000484998 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
NOP56-214ENST00000484998 SETD1AO15047 1707 aaKnown RBP12.89□□□□□ -0.35
NOP56-214ENST00000484998 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.358e-7■■□□□ 14.2
NOP56-214ENST00000484998 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
NOP56-214ENST00000484998 NLRP1Q9C000 1473 aa12.89□□□□□ -0.35
NOP56-214ENST00000484998 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
NOP56-214ENST00000484998 LTKP29376 864 aa12.86□□□□□ -0.35
NOP56-214ENST00000484998 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
NOP56-214ENST00000484998 KDM5DQ9BY66 1539 aa12.85□□□□□ -0.35
NOP56-214ENST00000484998 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
NOP56-214ENST00000484998 SYNMO15061 1565 aa12.85□□□□□ -0.35
NOP56-214ENST00000484998 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
NOP56-214ENST00000484998 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
NOP56-214ENST00000484998 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.35
NOP56-214ENST00000484998 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
NOP56-214ENST00000484998 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
NOP56-214ENST00000484998 ZC3H13Q5T200 1668 aaKnown RBP12.81□□□□□ -0.36
NOP56-214ENST00000484998 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
NOP56-214ENST00000484998 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
NOP56-214ENST00000484998 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
NOP56-214ENST00000484998 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
NOP56-214ENST00000484998 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
NOP56-214ENST00000484998 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
NOP56-214ENST00000484998 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
NOP56-214ENST00000484998 NCOA2Q15596 1464 aa12.77□□□□□ -0.37
NOP56-214ENST00000484998 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
NOP56-214ENST00000484998 KCNA6P17658 529 aa12.76□□□□□ -0.37
NOP56-214ENST00000484998 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
NOP56-214ENST00000484998 EID1Q9Y6B2 187 aa12.76□□□□□ -0.37
NOP56-214ENST00000484998 ERVK-7P63135 1459 aa12.76□□□□□ -0.37
NOP56-214ENST00000484998 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
NOP56-214ENST00000484998 JCADQ9P266 1359 aa12.75□□□□□ -0.37
NOP56-214ENST00000484998 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
NOP56-214ENST00000484998 TIAM1Q13009 1591 aa12.74□□□□□ -0.37
NOP56-214ENST00000484998 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
NOP56-214ENST00000484998 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
NOP56-214ENST00000484998 ZNF772Q68DY9 489 aaPredicted RBP12.74□□□□□ -0.37
NOP56-214ENST00000484998 ABCC3O15438 1527 aa12.73□□□□□ -0.37
NOP56-214ENST00000484998 CCDC141Q6ZP82 1450 aa12.73□□□□□ -0.37
NOP56-214ENST00000484998 RXRBP28702 533 aa12.73□□□□□ -0.37
NOP56-214ENST00000484998 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
NOP56-214ENST00000484998 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
NOP56-214ENST00000484998 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
NOP56-214ENST00000484998 SLIT1O75093 1534 aa12.72□□□□□ -0.37
NOP56-214ENST00000484998 LRP6O75581 1613 aa12.71□□□□□ -0.37
NOP56-214ENST00000484998 MAP3K1Q13233 1512 aa12.71□□□□□ -0.38
NOP56-214ENST00000484998 PHLPP1O60346 1717 aa12.71□□□□□ -0.38
NOP56-214ENST00000484998 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
NOP56-214ENST00000484998 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
NOP56-214ENST00000484998 MSH6P52701 1360 aa12.69□□□□□ -0.38
NOP56-214ENST00000484998 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
NOP56-214ENST00000484998 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
NOP56-214ENST00000484998 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
NOP56-214ENST00000484998 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
NOP56-214ENST00000484998 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
NOP56-214ENST00000484998 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
NOP56-214ENST00000484998 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
NOP56-214ENST00000484998 BCANQ96GW7 911 aa12.66□□□□□ -0.38
NOP56-214ENST00000484998 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
NOP56-214ENST00000484998 IDI1Q13907 227 aa12.65□□□□□ -0.38
NOP56-214ENST00000484998 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
NOP56-214ENST00000484998 TET3O43151 1660 aa12.64□□□□□ -0.39
NOP56-214ENST00000484998 CEP152O94986 1710 aa12.64□□□□□ -0.39
NOP56-214ENST00000484998 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
NOP56-214ENST00000484998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.397e-11■■■□□ 16.5
NOP56-214ENST00000484998 AFF2P51816 1311 aa12.62□□□□□ -0.39
NOP56-214ENST00000484998 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
NOP56-214ENST00000484998 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
NOP56-214ENST00000484998 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
NOP56-214ENST00000484998 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
NOP56-214ENST00000484998 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
NOP56-214ENST00000484998 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
NOP56-214ENST00000484998 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
NOP56-214ENST00000484998 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
NOP56-214ENST00000484998 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
NOP56-214ENST00000484998 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
NOP56-214ENST00000484998 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms