RNA–Protein interactions for RNA: ENST00000484998.5

NOP56-214, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 5

Gene NOP56, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-214ENST00000484998 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
NOP56-214ENST00000484998 ABCC9O60706 1549 aa19■□□□□ 0.63
NOP56-214ENST00000484998 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
NOP56-214ENST00000484998 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
NOP56-214ENST00000484998 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
NOP56-214ENST00000484998 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.423e-6■■■□□ 16.3
NOP56-214ENST00000484998 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.4
NOP56-214ENST00000484998 NACADO15069 1562 aa17.48■□□□□ 0.39
NOP56-214ENST00000484998 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
NOP56-214ENST00000484998 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
NOP56-214ENST00000484998 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
NOP56-214ENST00000484998 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
NOP56-214ENST00000484998 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
NOP56-214ENST00000484998 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
NOP56-214ENST00000484998 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
NOP56-214ENST00000484998 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
NOP56-214ENST00000484998 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
NOP56-214ENST00000484998 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
NOP56-214ENST00000484998 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
NOP56-214ENST00000484998 CUX2O14529 1486 aa16.5■□□□□ 0.23
NOP56-214ENST00000484998 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
NOP56-214ENST00000484998 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
NOP56-214ENST00000484998 NCAPD3P42695 1498 aa16.2■□□□□ 0.18
NOP56-214ENST00000484998 NESP48681 1621 aa16.18■□□□□ 0.18
NOP56-214ENST00000484998 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
NOP56-214ENST00000484998 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
NOP56-214ENST00000484998 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
NOP56-214ENST00000484998 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
NOP56-214ENST00000484998 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
NOP56-214ENST00000484998 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
NOP56-214ENST00000484998 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
NOP56-214ENST00000484998 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
NOP56-214ENST00000484998 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
NOP56-214ENST00000484998 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
NOP56-214ENST00000484998 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
NOP56-214ENST00000484998 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
NOP56-214ENST00000484998 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
NOP56-214ENST00000484998 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
NOP56-214ENST00000484998 WDR62O43379 1518 aa15.68■□□□□ 0.1
NOP56-214ENST00000484998 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
NOP56-214ENST00000484998 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
NOP56-214ENST00000484998 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
NOP56-214ENST00000484998 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
NOP56-214ENST00000484998 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
NOP56-214ENST00000484998 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
NOP56-214ENST00000484998 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
NOP56-214ENST00000484998 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
NOP56-214ENST00000484998 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
NOP56-214ENST00000484998 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
NOP56-214ENST00000484998 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
NOP56-214ENST00000484998 WIZO95785 1651 aa15.4■□□□□ 0.06
NOP56-214ENST00000484998 CFTRP13569 1480 aa15.38■□□□□ 0.05
NOP56-214ENST00000484998 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
NOP56-214ENST00000484998 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
NOP56-214ENST00000484998 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
NOP56-214ENST00000484998 FBLN2P98095 1184 aa15.23■□□□□ 0.03
NOP56-214ENST00000484998 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.022e-16■■■■□ 23.2
NOP56-214ENST00000484998 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
NOP56-214ENST00000484998 CHD1O14646 1710 aa15.15■□□□□ 0.02
NOP56-214ENST00000484998 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
NOP56-214ENST00000484998 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
NOP56-214ENST00000484998 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
NOP56-214ENST00000484998 PRDM2Q13029 1718 aa15.06■□□□□ 0
NOP56-214ENST00000484998 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
NOP56-214ENST00000484998 ABCC8Q09428 1581 aa15.03■□□□□ -0
NOP56-214ENST00000484998 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
NOP56-214ENST00000484998 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
NOP56-214ENST00000484998 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
NOP56-214ENST00000484998 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
NOP56-214ENST00000484998 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
NOP56-214ENST00000484998 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
NOP56-214ENST00000484998 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
NOP56-214ENST00000484998 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
NOP56-214ENST00000484998 SOGA1O94964 1423 aa14.92□□□□□ -0.02
NOP56-214ENST00000484998 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
NOP56-214ENST00000484998 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
NOP56-214ENST00000484998 ILDR1Q86SU0 546 aaPredicted RBP14.86□□□□□ -0.03
NOP56-214ENST00000484998 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
NOP56-214ENST00000484998 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
NOP56-214ENST00000484998 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
NOP56-214ENST00000484998 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
NOP56-214ENST00000484998 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.04
NOP56-214ENST00000484998 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
NOP56-214ENST00000484998 KDM4FA0A1W2PPD8 638 aa14.73□□□□□ -0.05
NOP56-214ENST00000484998 CUX1P39880 1505 aa14.7□□□□□ -0.06
NOP56-214ENST00000484998 KIF13AQ9H1H9 1805 aa14.67□□□□□ -0.06
NOP56-214ENST00000484998 FAM69CQ0P6D2 419 aa14.66□□□□□ -0.06
NOP56-214ENST00000484998 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
NOP56-214ENST00000484998 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
NOP56-214ENST00000484998 GRIN2AQ12879 1464 aa14.61□□□□□ -0.07
NOP56-214ENST00000484998 NUP160Q12769 1436 aa14.58□□□□□ -0.07
NOP56-214ENST00000484998 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
NOP56-214ENST00000484998 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
NOP56-214ENST00000484998 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
NOP56-214ENST00000484998 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
NOP56-214ENST00000484998 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
NOP56-214ENST00000484998 SHROOM2Q13796 1616 aa14.54□□□□□ -0.08
NOP56-214ENST00000484998 JPH4Q96JJ6 628 aa14.53□□□□□ -0.08
NOP56-214ENST00000484998 KDM6BO15054 1643 aa14.49□□□□□ -0.09
NOP56-214ENST00000484998 ADAMTS12P58397 1594 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms