RNA–Protein interactions for RNA: ENST00000484049.6

CCNC-205, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-205ENST00000484049 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
CCNC-205ENST00000484049 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
CCNC-205ENST00000484049 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
CCNC-205ENST00000484049 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
CCNC-205ENST00000484049 ATP7AQ04656 1500 aa16.29■□□□□ 0.2
CCNC-205ENST00000484049 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
CCNC-205ENST00000484049 CEP170BQ9Y4F5 1589 aaPredicted RBP16.29■□□□□ 0.2
CCNC-205ENST00000484049 POTEHQ6S545 545 aa16.28■□□□□ 0.2
CCNC-205ENST00000484049 PKD2Q13563 968 aa16.28■□□□□ 0.2
CCNC-205ENST00000484049 A2MP01023 1474 aa16.27■□□□□ 0.2
CCNC-205ENST00000484049 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
CCNC-205ENST00000484049 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
CCNC-205ENST00000484049 GGT6Q6P531 493 aa16.25■□□□□ 0.19
CCNC-205ENST00000484049 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
CCNC-205ENST00000484049 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
CCNC-205ENST00000484049 HSPA1LP34931 641 aa16.21■□□□□ 0.19
CCNC-205ENST00000484049 CFDP1Q9UEE9 299 aaPredicted RBP16.21■□□□□ 0.19
CCNC-205ENST00000484049 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
CCNC-205ENST00000484049 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
CCNC-205ENST00000484049 PLEKHH2Q8IVE3 1493 aa16.2■□□□□ 0.18
CCNC-205ENST00000484049 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
CCNC-205ENST00000484049 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
CCNC-205ENST00000484049 MED1Q15648 1581 aaPredicted RBP16.18■□□□□ 0.18
CCNC-205ENST00000484049 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
CCNC-205ENST00000484049 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CCNC-205ENST00000484049 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
CCNC-205ENST00000484049 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
CCNC-205ENST00000484049 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
CCNC-205ENST00000484049 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
CCNC-205ENST00000484049 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
CCNC-205ENST00000484049 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
CCNC-205ENST00000484049 TIAM1Q13009 1591 aa16.14■□□□□ 0.18
CCNC-205ENST00000484049 APLP2Q06481 763 aa16.14■□□□□ 0.17
CCNC-205ENST00000484049 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
CCNC-205ENST00000484049 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
CCNC-205ENST00000484049 TNRQ92752 1358 aa16.13■□□□□ 0.17
CCNC-205ENST00000484049 CPS1P31327 1500 aa16.13■□□□□ 0.17
CCNC-205ENST00000484049 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
CCNC-205ENST00000484049 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
CCNC-205ENST00000484049 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
CCNC-205ENST00000484049 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
CCNC-205ENST00000484049 PZPP20742 1482 aa16.1■□□□□ 0.17
CCNC-205ENST00000484049 KIF3BO15066 747 aa16.1■□□□□ 0.17
CCNC-205ENST00000484049 TOM1O60784 492 aa16.1■□□□□ 0.17
CCNC-205ENST00000484049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCNC-205ENST00000484049 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.16
CCNC-205ENST00000484049 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
CCNC-205ENST00000484049 MIA2Q96PC5 1412 aa16.07■□□□□ 0.16
CCNC-205ENST00000484049 MED14O60244 1454 aa16.06■□□□□ 0.16
CCNC-205ENST00000484049 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
CCNC-205ENST00000484049 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
CCNC-205ENST00000484049 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
CCNC-205ENST00000484049 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
CCNC-205ENST00000484049 ZBTB22O15209 634 aa16.04■□□□□ 0.16
CCNC-205ENST00000484049 DEPDC5O75140 1603 aa16.04■□□□□ 0.16
CCNC-205ENST00000484049 UGGT1Q9NYU2 1555 aa16.04■□□□□ 0.16
CCNC-205ENST00000484049 ABCB7O75027 752 aa16.03■□□□□ 0.16
CCNC-205ENST00000484049 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
CCNC-205ENST00000484049 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
CCNC-205ENST00000484049 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
CCNC-205ENST00000484049 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
CCNC-205ENST00000484049 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
CCNC-205ENST00000484049 LRRC7Q96NW7 1537 aa16.02■□□□□ 0.15
CCNC-205ENST00000484049 IQGAP1P46940 1657 aa16.01■□□□□ 0.15
CCNC-205ENST00000484049 CAMSAP2Q08AD1 1489 aa16.01■□□□□ 0.15
CCNC-205ENST00000484049 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
CCNC-205ENST00000484049 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
CCNC-205ENST00000484049 ZC3H13Q5T200 1668 aaKnown RBP15.97■□□□□ 0.15
CCNC-205ENST00000484049 ABCC3O15438 1527 aa15.96■□□□□ 0.15
CCNC-205ENST00000484049 RNF17Q9BXT8 1623 aaKnown RBP15.96■□□□□ 0.15
CCNC-205ENST00000484049 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.14
CCNC-205ENST00000484049 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
CCNC-205ENST00000484049 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
CCNC-205ENST00000484049 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
CCNC-205ENST00000484049 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
CCNC-205ENST00000484049 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
CCNC-205ENST00000484049 SYNMO15061 1565 aa15.93■□□□□ 0.14
CCNC-205ENST00000484049 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
CCNC-205ENST00000484049 LTKP29376 864 aa15.92■□□□□ 0.14
CCNC-205ENST00000484049 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
CCNC-205ENST00000484049 CEP152O94986 1710 aa15.9■□□□□ 0.14
CCNC-205ENST00000484049 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
CCNC-205ENST00000484049 TSPY4P0CV99 314 aa15.89■□□□□ 0.13
CCNC-205ENST00000484049 TSPY10P0CW01 314 aa15.89■□□□□ 0.13
CCNC-205ENST00000484049 ARHGAP23Q9P227 1491 aa15.89■□□□□ 0.13
CCNC-205ENST00000484049 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
CCNC-205ENST00000484049 SLIT1O75093 1534 aa15.87■□□□□ 0.13
CCNC-205ENST00000484049 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
CCNC-205ENST00000484049 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
CCNC-205ENST00000484049 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
CCNC-205ENST00000484049 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
CCNC-205ENST00000484049 FAM135BQ49AJ0 1406 aa15.82■□□□□ 0.12
CCNC-205ENST00000484049 ARHGAP31Q2M1Z3 1444 aa15.8■□□□□ 0.12
CCNC-205ENST00000484049 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
CCNC-205ENST00000484049 KANK4Q5T7N3 995 aaPredicted RBP15.8■□□□□ 0.12
CCNC-205ENST00000484049 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
CCNC-205ENST00000484049 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
CCNC-205ENST00000484049 POLA2Q14181 598 aa15.78■□□□□ 0.12
CCNC-205ENST00000484049 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
CCNC-205ENST00000484049 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms