RNA–Protein interactions for RNA: ENST00000483697.2

PRKCI-204, Transcript of protein kinase C iota, humanhuman

TSL 3

Gene PRKCI, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-204ENST00000483697 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
PRKCI-204ENST00000483697 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
PRKCI-204ENST00000483697 KIF14Q15058 1648 aa12.07□□□□□ -0.48
PRKCI-204ENST00000483697 UBAP1LF5GYI3 381 aa12.06□□□□□ -0.48
PRKCI-204ENST00000483697 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
PRKCI-204ENST00000483697 ABCC1P33527 1531 aa12.05□□□□□ -0.48
PRKCI-204ENST00000483697 ARHGAP5Q13017 1502 aa12.05□□□□□ -0.48
PRKCI-204ENST00000483697 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
PRKCI-204ENST00000483697 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
PRKCI-204ENST00000483697 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
PRKCI-204ENST00000483697 ZMYM3Q14202 1370 aa12.04□□□□□ -0.48
PRKCI-204ENST00000483697 ITSN2Q9NZM3 1697 aa12.03□□□□□ -0.48
PRKCI-204ENST00000483697 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
PRKCI-204ENST00000483697 CLIP1P30622 1438 aa12.01□□□□□ -0.49
PRKCI-204ENST00000483697 CEP170BQ9Y4F5 1589 aaPredicted RBP12.01□□□□□ -0.49
PRKCI-204ENST00000483697 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
PRKCI-204ENST00000483697 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
PRKCI-204ENST00000483697 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
PRKCI-204ENST00000483697 CPS1P31327 1500 aa12□□□□□ -0.49
PRKCI-204ENST00000483697 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
PRKCI-204ENST00000483697 LRRIQ1Q96JM4 1722 aa11.98□□□□□ -0.49
PRKCI-204ENST00000483697 PLXNC1O60486 1568 aa11.98□□□□□ -0.49
PRKCI-204ENST00000483697 HSPA1LP34931 641 aa11.98□□□□□ -0.49
PRKCI-204ENST00000483697 SAMD9LQ8IVG5 1584 aa11.97□□□□□ -0.49
PRKCI-204ENST00000483697 TOM1O60784 492 aa11.97□□□□□ -0.49
PRKCI-204ENST00000483697 PROM2Q8N271 834 aa11.97□□□□□ -0.49
PRKCI-204ENST00000483697 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
PRKCI-204ENST00000483697 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
PRKCI-204ENST00000483697 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
PRKCI-204ENST00000483697 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
PRKCI-204ENST00000483697 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
PRKCI-204ENST00000483697 DNMT1P26358 1616 aaKnown RBP11.95□□□□□ -0.5
PRKCI-204ENST00000483697 ALKQ9UM73 1620 aa11.95□□□□□ -0.5
PRKCI-204ENST00000483697 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
PRKCI-204ENST00000483697 POLR1AO95602 1720 aaPredicted RBP11.94□□□□□ -0.5
PRKCI-204ENST00000483697 RANGAP1P46060 587 aaPredicted RBP11.94□□□□□ -0.5
PRKCI-204ENST00000483697 SHANK2Q9UPX8 1470 aa11.94□□□□□ -0.5
PRKCI-204ENST00000483697 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
PRKCI-204ENST00000483697 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
PRKCI-204ENST00000483697 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
PRKCI-204ENST00000483697 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
PRKCI-204ENST00000483697 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
PRKCI-204ENST00000483697 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
PRKCI-204ENST00000483697 FAM135AQ9P2D6 1515 aa11.91□□□□□ -0.5
PRKCI-204ENST00000483697 MED14O60244 1454 aa11.9□□□□□ -0.5
PRKCI-204ENST00000483697 A2MP01023 1474 aa11.9□□□□□ -0.5
PRKCI-204ENST00000483697 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
PRKCI-204ENST00000483697 POTEHQ6S545 545 aa11.9□□□□□ -0.5
PRKCI-204ENST00000483697 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
PRKCI-204ENST00000483697 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
PRKCI-204ENST00000483697 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRKCI-204ENST00000483697 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
PRKCI-204ENST00000483697 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
PRKCI-204ENST00000483697 ADGBQ8N7X0 1667 aa11.88□□□□□ -0.51
PRKCI-204ENST00000483697 CASKIN1Q8WXD9 1431 aa11.87□□□□□ -0.51
PRKCI-204ENST00000483697 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
PRKCI-204ENST00000483697 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
PRKCI-204ENST00000483697 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
PRKCI-204ENST00000483697 ATP1B4Q9UN42 357 aaPredicted RBP11.86□□□□□ -0.51
PRKCI-204ENST00000483697 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
PRKCI-204ENST00000483697 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
PRKCI-204ENST00000483697 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
PRKCI-204ENST00000483697 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
PRKCI-204ENST00000483697 PZPP20742 1482 aa11.83□□□□□ -0.52
PRKCI-204ENST00000483697 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
PRKCI-204ENST00000483697 SYNMO15061 1565 aa11.83□□□□□ -0.52
PRKCI-204ENST00000483697 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
PRKCI-204ENST00000483697 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
PRKCI-204ENST00000483697 TNRQ92752 1358 aa11.82□□□□□ -0.52
PRKCI-204ENST00000483697 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRKCI-204ENST00000483697 GGT6Q6P531 493 aa11.82□□□□□ -0.52
PRKCI-204ENST00000483697 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
PRKCI-204ENST00000483697 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
PRKCI-204ENST00000483697 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
PRKCI-204ENST00000483697 DHX29Q7Z478 1369 aaKnown RBP11.8□□□□□ -0.52
PRKCI-204ENST00000483697 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
PRKCI-204ENST00000483697 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
PRKCI-204ENST00000483697 MIA2Q96PC5 1412 aa11.79□□□□□ -0.52
PRKCI-204ENST00000483697 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
PRKCI-204ENST00000483697 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
PRKCI-204ENST00000483697 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
PRKCI-204ENST00000483697 KDM5DQ9BY66 1539 aa11.78□□□□□ -0.52
PRKCI-204ENST00000483697 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
PRKCI-204ENST00000483697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRKCI-204ENST00000483697 ZC3H13Q5T200 1668 aaKnown RBP11.77□□□□□ -0.53
PRKCI-204ENST00000483697 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
PRKCI-204ENST00000483697 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
PRKCI-204ENST00000483697 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
PRKCI-204ENST00000483697 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
PRKCI-204ENST00000483697 XIRP1Q702N8 1843 aaKnown RBP11.75□□□□□ -0.53
PRKCI-204ENST00000483697 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
PRKCI-204ENST00000483697 MIER1Q8N108 512 aa11.73□□□□□ -0.53
PRKCI-204ENST00000483697 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
PRKCI-204ENST00000483697 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
PRKCI-204ENST00000483697 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
PRKCI-204ENST00000483697 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
PRKCI-204ENST00000483697 KIF3BO15066 747 aa11.7□□□□□ -0.54
PRKCI-204ENST00000483697 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
PRKCI-204ENST00000483697 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
PRKCI-204ENST00000483697 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms