RNA–Protein interactions for RNA: ENST00000483697.2

PRKCI-204, Transcript of protein kinase C iota, humanhuman

TSL 3

Gene PRKCI, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-204ENST00000483697 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
PRKCI-204ENST00000483697 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
PRKCI-204ENST00000483697 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
PRKCI-204ENST00000483697 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
PRKCI-204ENST00000483697 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
PRKCI-204ENST00000483697 FOXD1Q16676 465 aa17.55■□□□□ 0.4
PRKCI-204ENST00000483697 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
PRKCI-204ENST00000483697 ABCC9O60706 1549 aa17.16■□□□□ 0.34
PRKCI-204ENST00000483697 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
PRKCI-204ENST00000483697 ADRA2BP18089 450 aa16.81■□□□□ 0.28
PRKCI-204ENST00000483697 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
PRKCI-204ENST00000483697 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
PRKCI-204ENST00000483697 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
PRKCI-204ENST00000483697 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
PRKCI-204ENST00000483697 MSH5O43196 834 aa16.18■□□□□ 0.18
PRKCI-204ENST00000483697 NACADO15069 1562 aa16.1■□□□□ 0.17
PRKCI-204ENST00000483697 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
PRKCI-204ENST00000483697 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
PRKCI-204ENST00000483697 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
PRKCI-204ENST00000483697 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
PRKCI-204ENST00000483697 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
PRKCI-204ENST00000483697 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
PRKCI-204ENST00000483697 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
PRKCI-204ENST00000483697 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
PRKCI-204ENST00000483697 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
PRKCI-204ENST00000483697 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
PRKCI-204ENST00000483697 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
PRKCI-204ENST00000483697 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
PRKCI-204ENST00000483697 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.05
PRKCI-204ENST00000483697 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
PRKCI-204ENST00000483697 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
PRKCI-204ENST00000483697 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
PRKCI-204ENST00000483697 CUX2O14529 1486 aa15.11■□□□□ 0.01
PRKCI-204ENST00000483697 POTEDQ86YR6 584 aa15.06■□□□□ 0
PRKCI-204ENST00000483697 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
PRKCI-204ENST00000483697 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
PRKCI-204ENST00000483697 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
PRKCI-204ENST00000483697 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
PRKCI-204ENST00000483697 KCNA4P22459 653 aa14.85□□□□□ -0.03
PRKCI-204ENST00000483697 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
PRKCI-204ENST00000483697 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
PRKCI-204ENST00000483697 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
PRKCI-204ENST00000483697 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
PRKCI-204ENST00000483697 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
PRKCI-204ENST00000483697 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
PRKCI-204ENST00000483697 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
PRKCI-204ENST00000483697 NESP48681 1621 aa14.64□□□□□ -0.07
PRKCI-204ENST00000483697 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
PRKCI-204ENST00000483697 LAMC3Q9Y6N6 1575 aa14.59□□□□□ -0.07
PRKCI-204ENST00000483697 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
PRKCI-204ENST00000483697 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
PRKCI-204ENST00000483697 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
PRKCI-204ENST00000483697 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
PRKCI-204ENST00000483697 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
PRKCI-204ENST00000483697 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
PRKCI-204ENST00000483697 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
PRKCI-204ENST00000483697 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
PRKCI-204ENST00000483697 WDR62O43379 1518 aa14.38□□□□□ -0.11
PRKCI-204ENST00000483697 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
PRKCI-204ENST00000483697 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
PRKCI-204ENST00000483697 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
PRKCI-204ENST00000483697 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
PRKCI-204ENST00000483697 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
PRKCI-204ENST00000483697 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
PRKCI-204ENST00000483697 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
PRKCI-204ENST00000483697 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
PRKCI-204ENST00000483697 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
PRKCI-204ENST00000483697 CFTRP13569 1480 aa14.12□□□□□ -0.15
PRKCI-204ENST00000483697 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
PRKCI-204ENST00000483697 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
PRKCI-204ENST00000483697 WIZO95785 1651 aa14.06□□□□□ -0.16
PRKCI-204ENST00000483697 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
PRKCI-204ENST00000483697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRKCI-204ENST00000483697 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
PRKCI-204ENST00000483697 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
PRKCI-204ENST00000483697 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
PRKCI-204ENST00000483697 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
PRKCI-204ENST00000483697 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
PRKCI-204ENST00000483697 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
PRKCI-204ENST00000483697 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
PRKCI-204ENST00000483697 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
PRKCI-204ENST00000483697 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
PRKCI-204ENST00000483697 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
PRKCI-204ENST00000483697 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
PRKCI-204ENST00000483697 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
PRKCI-204ENST00000483697 CHD1O14646 1710 aa13.83□□□□□ -0.2
PRKCI-204ENST00000483697 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
PRKCI-204ENST00000483697 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
PRKCI-204ENST00000483697 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
PRKCI-204ENST00000483697 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
PRKCI-204ENST00000483697 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRKCI-204ENST00000483697 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
PRKCI-204ENST00000483697 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
PRKCI-204ENST00000483697 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
PRKCI-204ENST00000483697 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
PRKCI-204ENST00000483697 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
PRKCI-204ENST00000483697 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
PRKCI-204ENST00000483697 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
PRKCI-204ENST00000483697 ZBTB22O15209 634 aa13.65□□□□□ -0.22
PRKCI-204ENST00000483697 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms