RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MED1Q15648 1581 aaPredicted RBP16.46■□□□□ 0.23
SSBP1-210ENST00000481508 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
SSBP1-210ENST00000481508 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-210ENST00000481508 REREQ9P2R6 1566 aa16.45■□□□□ 0.22
SSBP1-210ENST00000481508 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
SSBP1-210ENST00000481508 DNMT1P26358 1616 aaKnown RBP16.44■□□□□ 0.22
SSBP1-210ENST00000481508 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
SSBP1-210ENST00000481508 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
SSBP1-210ENST00000481508 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
SSBP1-210ENST00000481508 ABCC5O15440 1437 aa16.41■□□□□ 0.22
SSBP1-210ENST00000481508 UHRF1BP1Q6BDS2 1440 aa16.41■□□□□ 0.22
SSBP1-210ENST00000481508 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
SSBP1-210ENST00000481508 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
SSBP1-210ENST00000481508 PTPRTO14522 1441 aa16.39■□□□□ 0.21
SSBP1-210ENST00000481508 DAPK1P53355 1430 aa16.39■□□□□ 0.21
SSBP1-210ENST00000481508 AGLP35573 1532 aa16.39■□□□□ 0.21
SSBP1-210ENST00000481508 A2MP01023 1474 aa16.38■□□□□ 0.21
SSBP1-210ENST00000481508 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
SSBP1-210ENST00000481508 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
SSBP1-210ENST00000481508 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
SSBP1-210ENST00000481508 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
SSBP1-210ENST00000481508 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
SSBP1-210ENST00000481508 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
SSBP1-210ENST00000481508 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
SSBP1-210ENST00000481508 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
SSBP1-210ENST00000481508 DHX29Q7Z478 1369 aaKnown RBP16.3■□□□□ 0.2
SSBP1-210ENST00000481508 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
SSBP1-210ENST00000481508 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
SSBP1-210ENST00000481508 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
SSBP1-210ENST00000481508 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
SSBP1-210ENST00000481508 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
SSBP1-210ENST00000481508 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.2
SSBP1-210ENST00000481508 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
SSBP1-210ENST00000481508 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
SSBP1-210ENST00000481508 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.19
SSBP1-210ENST00000481508 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
SSBP1-210ENST00000481508 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
SSBP1-210ENST00000481508 ZNF335Q9H4Z2 1342 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-210ENST00000481508 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
SSBP1-210ENST00000481508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSBP1-210ENST00000481508 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
SSBP1-210ENST00000481508 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-210ENST00000481508 KIF3BO15066 747 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 ITGAEP38570 1179 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 GGT6Q6P531 493 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 MYO3AQ8NEV4 1616 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 CEP152O94986 1710 aa16.22■□□□□ 0.19
SSBP1-210ENST00000481508 DEPDC5O75140 1603 aa16.21■□□□□ 0.19
SSBP1-210ENST00000481508 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
SSBP1-210ENST00000481508 HSPA1LP34931 641 aa16.19■□□□□ 0.18
SSBP1-210ENST00000481508 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
SSBP1-210ENST00000481508 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-210ENST00000481508 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
SSBP1-210ENST00000481508 ABCC3O15438 1527 aa16.16■□□□□ 0.18
SSBP1-210ENST00000481508 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
SSBP1-210ENST00000481508 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
SSBP1-210ENST00000481508 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
SSBP1-210ENST00000481508 NCKAP5LQ9HCH0 1330 aa16.16■□□□□ 0.18
SSBP1-210ENST00000481508 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
SSBP1-210ENST00000481508 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
SSBP1-210ENST00000481508 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
SSBP1-210ENST00000481508 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
SSBP1-210ENST00000481508 SETD1AO15047 1707 aaKnown RBP16.14■□□□□ 0.17
SSBP1-210ENST00000481508 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
SSBP1-210ENST00000481508 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
SSBP1-210ENST00000481508 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
SSBP1-210ENST00000481508 CFAP65Q6ZU64 1925 aaKnown RBP16.13■□□□□ 0.17
SSBP1-210ENST00000481508 UNC13BO14795 1591 aa16.13■□□□□ 0.17
SSBP1-210ENST00000481508 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
SSBP1-210ENST00000481508 KCNA4P22459 653 aa16.1■□□□□ 0.17
SSBP1-210ENST00000481508 ESF1Q9H501 851 aaKnown RBP16.1■□□□□ 0.17
SSBP1-210ENST00000481508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.165e-6■□□□□ 8.4
SSBP1-210ENST00000481508 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
SSBP1-210ENST00000481508 NAIPQ13075 1403 aa16.08■□□□□ 0.16
SSBP1-210ENST00000481508 PZPP20742 1482 aa16.08■□□□□ 0.16
SSBP1-210ENST00000481508 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
SSBP1-210ENST00000481508 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
SSBP1-210ENST00000481508 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
SSBP1-210ENST00000481508 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-210ENST00000481508 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
SSBP1-210ENST00000481508 NPATQ14207 1427 aa16.05■□□□□ 0.16
SSBP1-210ENST00000481508 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
SSBP1-210ENST00000481508 STRCP1A6NGW2 1772 aa16.04■□□□□ 0.16
SSBP1-210ENST00000481508 TET3O43151 1660 aa16.04■□□□□ 0.16
SSBP1-210ENST00000481508 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
SSBP1-210ENST00000481508 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
SSBP1-210ENST00000481508 E9PCH4 1651 aa16.02■□□□□ 0.15
SSBP1-210ENST00000481508 KANK1Q14678 1352 aa16■□□□□ 0.15
SSBP1-210ENST00000481508 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
SSBP1-210ENST00000481508 TNRQ92752 1358 aa16■□□□□ 0.15
SSBP1-210ENST00000481508 CPS1P31327 1500 aa15.99■□□□□ 0.15
SSBP1-210ENST00000481508 SYNMO15061 1565 aa15.99■□□□□ 0.15
SSBP1-210ENST00000481508 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
SSBP1-210ENST00000481508 NUP155O75694 1391 aa15.96■□□□□ 0.15
SSBP1-210ENST00000481508 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
SSBP1-210ENST00000481508 PKD2Q13563 968 aa15.94■□□□□ 0.14
SSBP1-210ENST00000481508 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
SSBP1-210ENST00000481508 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
SSBP1-210ENST00000481508 NOS1P29475 1434 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms