RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
ABCF3-213ENST00000480539 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
ABCF3-213ENST00000480539 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
ABCF3-213ENST00000480539 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
ABCF3-213ENST00000480539 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
ABCF3-213ENST00000480539 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
ABCF3-213ENST00000480539 CNTLNQ9NXG0 1405 aa22.99■■□□□ 1.27
ABCF3-213ENST00000480539 ANKRD50Q9ULJ7 1429 aa22.99■■□□□ 1.27
ABCF3-213ENST00000480539 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
ABCF3-213ENST00000480539 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
ABCF3-213ENST00000480539 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
ABCF3-213ENST00000480539 C3P01024 1663 aa22.97■■□□□ 1.27
ABCF3-213ENST00000480539 GCC2Q8IWJ2 1684 aa22.97■■□□□ 1.27
ABCF3-213ENST00000480539 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
ABCF3-213ENST00000480539 CEP152O94986 1710 aa22.94■■□□□ 1.26
ABCF3-213ENST00000480539 ABCC3O15438 1527 aa22.94■■□□□ 1.26
ABCF3-213ENST00000480539 CEBPAP49715 358 aaPredicted RBP22.91■■□□□ 1.26
ABCF3-213ENST00000480539 NAIPQ13075 1403 aa22.91■■□□□ 1.26
ABCF3-213ENST00000480539 UNC13BO14795 1591 aa22.9■■□□□ 1.26
ABCF3-213ENST00000480539 PPP6R1Q9UPN7 881 aa22.9■■□□□ 1.26
ABCF3-213ENST00000480539 HFM1A2PYH4 1435 aa22.9■■□□□ 1.26
ABCF3-213ENST00000480539 WASHC2CQ9Y4E1 1318 aa22.89■■□□□ 1.26
ABCF3-213ENST00000480539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
ABCF3-213ENST00000480539 CAMSAP1Q5T5Y3 1602 aa22.89■■□□□ 1.25
ABCF3-213ENST00000480539 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
ABCF3-213ENST00000480539 VWDEQ8N2E2 1590 aa22.87■■□□□ 1.25
ABCF3-213ENST00000480539 KANK1Q14678 1352 aa22.86■■□□□ 1.25
ABCF3-213ENST00000480539 PZPP20742 1482 aa22.83■■□□□ 1.25
ABCF3-213ENST00000480539 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
ABCF3-213ENST00000480539 PREX1Q8TCU6 1659 aa22.81■■□□□ 1.24
ABCF3-213ENST00000480539 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
ABCF3-213ENST00000480539 EFCAB6Q5THR3 1501 aa22.8■■□□□ 1.24
ABCF3-213ENST00000480539 NPATQ14207 1427 aa22.79■■□□□ 1.24
ABCF3-213ENST00000480539 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
ABCF3-213ENST00000480539 LMTK3Q96Q04 1460 aa22.77■■□□□ 1.24
ABCF3-213ENST00000480539 TET3O43151 1660 aa22.77■■□□□ 1.24
ABCF3-213ENST00000480539 NUP155O75694 1391 aa22.75■■□□□ 1.23
ABCF3-213ENST00000480539 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
ABCF3-213ENST00000480539 ERVK-7P63135 1459 aa22.74■■□□□ 1.23
ABCF3-213ENST00000480539 FBXO31Q5XUX0 539 aaPredicted RBP22.74■■□□□ 1.23
ABCF3-213ENST00000480539 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
ABCF3-213ENST00000480539 SPATA31D1Q6ZQQ2 1576 aa22.73■■□□□ 1.23
ABCF3-213ENST00000480539 TNRQ92752 1358 aa22.72■■□□□ 1.23
ABCF3-213ENST00000480539 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
ABCF3-213ENST00000480539 ZNF142P52746 1687 aaPredicted RBP22.7■■□□□ 1.22
ABCF3-213ENST00000480539 E9PCH4 1651 aa22.69■■□□□ 1.22
ABCF3-213ENST00000480539 CEP170BQ9Y4F5 1589 aaPredicted RBP22.68■■□□□ 1.22
ABCF3-213ENST00000480539 RAB3GAP2Q9H2M9 1393 aa22.66■■□□□ 1.22
ABCF3-213ENST00000480539 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
ABCF3-213ENST00000480539 CFAP65Q6ZU64 1925 aaKnown RBP22.66■■□□□ 1.22
ABCF3-213ENST00000480539 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
ABCF3-213ENST00000480539 SYNMO15061 1565 aa22.65■■□□□ 1.22
ABCF3-213ENST00000480539 SETD1BQ9UPS6 1966 aaKnown RBP22.65■■□□□ 1.22
ABCF3-213ENST00000480539 A2ML1A8K2U0 1454 aa22.63■■□□□ 1.21
ABCF3-213ENST00000480539 HSPA2P54652 639 aa22.63■■□□□ 1.21
ABCF3-213ENST00000480539 NLRP1Q9C000 1473 aa22.62■■□□□ 1.21
ABCF3-213ENST00000480539 NOS1P29475 1434 aa22.61■■□□□ 1.21
ABCF3-213ENST00000480539 UGGT1Q9NYU2 1555 aa22.57■■□□□ 1.2
ABCF3-213ENST00000480539 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
ABCF3-213ENST00000480539 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
ABCF3-213ENST00000480539 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
ABCF3-213ENST00000480539 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
ABCF3-213ENST00000480539 UBR1Q8IWV7 1749 aa22.54■■□□□ 1.2
ABCF3-213ENST00000480539 PKD2Q13563 968 aa22.52■■□□□ 1.2
ABCF3-213ENST00000480539 ADGRB3O60242 1522 aa22.52■■□□□ 1.19
ABCF3-213ENST00000480539 TRPM2O94759 1503 aa22.51■■□□□ 1.19
ABCF3-213ENST00000480539 PTPRTO14522 1441 aa22.49■■□□□ 1.19
ABCF3-213ENST00000480539 PLA2R1Q13018 1463 aa22.48■■□□□ 1.19
ABCF3-213ENST00000480539 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
ABCF3-213ENST00000480539 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
ABCF3-213ENST00000480539 IDI1Q13907 227 aa22.47■■□□□ 1.19
ABCF3-213ENST00000480539 FOXD1Q16676 465 aa22.47■■□□□ 1.19
ABCF3-213ENST00000480539 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
ABCF3-213ENST00000480539 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
ABCF3-213ENST00000480539 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
ABCF3-213ENST00000480539 SLC52A1Q9NWF4 448 aa22.45■■□□□ 1.18
ABCF3-213ENST00000480539 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
ABCF3-213ENST00000480539 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
ABCF3-213ENST00000480539 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
ABCF3-213ENST00000480539 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
ABCF3-213ENST00000480539 HRCP23327 699 aa22.42■■□□□ 1.18
ABCF3-213ENST00000480539 THEMISQ8N1K5 641 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-213ENST00000480539 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
ABCF3-213ENST00000480539 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
ABCF3-213ENST00000480539 SLIT1O75093 1534 aa22.41■■□□□ 1.18
ABCF3-213ENST00000480539 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
ABCF3-213ENST00000480539 CHGAP10645 457 aaKnown RBP22.39■■□□□ 1.17
ABCF3-213ENST00000480539 TMEM2Q9UHN6 1383 aa22.37■■□□□ 1.17
ABCF3-213ENST00000480539 SCAF11Q99590 1463 aaKnown RBP22.35■■□□□ 1.17
ABCF3-213ENST00000480539 KIF1BO60333 1816 aa22.34■■□□□ 1.17
ABCF3-213ENST00000480539 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
ABCF3-213ENST00000480539 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
ABCF3-213ENST00000480539 IQGAP1P46940 1657 aa22.32■■□□□ 1.16
ABCF3-213ENST00000480539 ZFYVE9O95405 1425 aa22.31■■□□□ 1.16
ABCF3-213ENST00000480539 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
ABCF3-213ENST00000480539 NPHP4O75161 1426 aaPredicted RBP22.31■■□□□ 1.16
ABCF3-213ENST00000480539 MED14O60244 1454 aa22.29■■□□□ 1.16
ABCF3-213ENST00000480539 LTKP29376 864 aa22.29■■□□□ 1.16
ABCF3-213ENST00000480539 PCGF6Q9BYE7 350 aa22.29■■□□□ 1.16
ABCF3-213ENST00000480539 TXNDC2Q86VQ3 553 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms