RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
CDK9-203ENST00000480353 STRCQ7RTU9 1775 aa23.71■■□□□ 1.39
CDK9-203ENST00000480353 DNMT1P26358 1616 aaKnown RBP23.71■■□□□ 1.39
CDK9-203ENST00000480353 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
CDK9-203ENST00000480353 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
CDK9-203ENST00000480353 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
CDK9-203ENST00000480353 DAPK1P53355 1430 aa23.7■■□□□ 1.38
CDK9-203ENST00000480353 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.38
CDK9-203ENST00000480353 ABCC5O15440 1437 aa23.69■■□□□ 1.38
CDK9-203ENST00000480353 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
CDK9-203ENST00000480353 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
CDK9-203ENST00000480353 RNF17Q9BXT8 1623 aaKnown RBP23.68■■□□□ 1.38
CDK9-203ENST00000480353 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
CDK9-203ENST00000480353 CAMSAP1Q5T5Y3 1602 aa23.67■■□□□ 1.38
CDK9-203ENST00000480353 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
CDK9-203ENST00000480353 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
CDK9-203ENST00000480353 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
CDK9-203ENST00000480353 PZPP20742 1482 aa23.65■■□□□ 1.38
CDK9-203ENST00000480353 ANKRD30AQ9BXX3 1397 aa23.65■■□□□ 1.38
CDK9-203ENST00000480353 TNRQ92752 1358 aa23.64■■□□□ 1.37
CDK9-203ENST00000480353 NCOA1Q15788 1441 aa23.63■■□□□ 1.37
CDK9-203ENST00000480353 FBXO41Q8TF61 875 aa23.63■■□□□ 1.37
CDK9-203ENST00000480353 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
CDK9-203ENST00000480353 FBXO31Q5XUX0 539 aaPredicted RBP23.62■■□□□ 1.37
CDK9-203ENST00000480353 CEP152O94986 1710 aa23.61■■□□□ 1.37
CDK9-203ENST00000480353 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
CDK9-203ENST00000480353 PTPRTO14522 1441 aa23.59■■□□□ 1.37
CDK9-203ENST00000480353 ABCC3O15438 1527 aa23.59■■□□□ 1.37
CDK9-203ENST00000480353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.372e-7■□□□□ 10.1
CDK9-203ENST00000480353 KANK1Q14678 1352 aa23.58■■□□□ 1.37
CDK9-203ENST00000480353 CFAP65Q6ZU64 1925 aaKnown RBP23.58■■□□□ 1.37
CDK9-203ENST00000480353 CERKQ8TCT0 537 aa23.57■■□□□ 1.36
CDK9-203ENST00000480353 NCKAP5LQ9HCH0 1330 aa23.57■■□□□ 1.36
CDK9-203ENST00000480353 PKD2Q13563 968 aa23.56■■□□□ 1.36
CDK9-203ENST00000480353 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
CDK9-203ENST00000480353 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
CDK9-203ENST00000480353 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
CDK9-203ENST00000480353 PRDM15P57071 1507 aaPredicted RBP23.53■■□□□ 1.36
CDK9-203ENST00000480353 NLRP1Q9C000 1473 aa23.52■■□□□ 1.36
CDK9-203ENST00000480353 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
CDK9-203ENST00000480353 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
CDK9-203ENST00000480353 DEPDC5O75140 1603 aa23.49■■□□□ 1.35
CDK9-203ENST00000480353 UGGT1Q9NYU2 1555 aa23.48■■□□□ 1.35
CDK9-203ENST00000480353 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
CDK9-203ENST00000480353 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
CDK9-203ENST00000480353 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
CDK9-203ENST00000480353 ITGAEP38570 1179 aa23.46■■□□□ 1.35
CDK9-203ENST00000480353 ANKLE2Q86XL3 938 aa23.44■■□□□ 1.34
CDK9-203ENST00000480353 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
CDK9-203ENST00000480353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDK9-203ENST00000480353 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
CDK9-203ENST00000480353 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
CDK9-203ENST00000480353 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
CDK9-203ENST00000480353 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
CDK9-203ENST00000480353 LTBP4Q8N2S1 1624 aa23.37■■□□□ 1.33
CDK9-203ENST00000480353 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
CDK9-203ENST00000480353 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
CDK9-203ENST00000480353 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
CDK9-203ENST00000480353 NEURL4Q96JN8 1562 aa23.34■■□□□ 1.33
CDK9-203ENST00000480353 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
CDK9-203ENST00000480353 NPHP4O75161 1426 aaPredicted RBP23.32■■□□□ 1.32
CDK9-203ENST00000480353 IQSEC2Q5JU85 1478 aa23.31■■□□□ 1.32
CDK9-203ENST00000480353 IQGAP1P46940 1657 aa23.31■■□□□ 1.32
CDK9-203ENST00000480353 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
CDK9-203ENST00000480353 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
CDK9-203ENST00000480353 TET3O43151 1660 aa23.29■■□□□ 1.32
CDK9-203ENST00000480353 UNC13BO14795 1591 aa23.28■■□□□ 1.32
CDK9-203ENST00000480353 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
CDK9-203ENST00000480353 MED14O60244 1454 aa23.27■■□□□ 1.32
CDK9-203ENST00000480353 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
CDK9-203ENST00000480353 TXNDC2Q86VQ3 553 aa23.26■■□□□ 1.31
CDK9-203ENST00000480353 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
CDK9-203ENST00000480353 IDI1Q13907 227 aa23.24■■□□□ 1.31
CDK9-203ENST00000480353 CPS1P31327 1500 aa23.23■■□□□ 1.31
CDK9-203ENST00000480353 SYNMO15061 1565 aa23.23■■□□□ 1.31
CDK9-203ENST00000480353 KDM5AP29375 1690 aaKnown RBP23.23■■□□□ 1.31
CDK9-203ENST00000480353 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
CDK9-203ENST00000480353 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
CDK9-203ENST00000480353 NUP155O75694 1391 aa23.22■■□□□ 1.31
CDK9-203ENST00000480353 SLIT1O75093 1534 aa23.22■■□□□ 1.31
CDK9-203ENST00000480353 UBAP1LF5GYI3 381 aa23.21■■□□□ 1.31
CDK9-203ENST00000480353 NOS1P29475 1434 aa23.21■■□□□ 1.31
CDK9-203ENST00000480353 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
CDK9-203ENST00000480353 ARHGAP23Q9P227 1491 aa23.19■■□□□ 1.3
CDK9-203ENST00000480353 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
CDK9-203ENST00000480353 TMEM2Q9UHN6 1383 aa23.18■■□□□ 1.3
CDK9-203ENST00000480353 E9PCH4 1651 aa23.17■■□□□ 1.3
CDK9-203ENST00000480353 CHGAP10645 457 aaKnown RBP23.17■■□□□ 1.3
CDK9-203ENST00000480353 LTKP29376 864 aa23.17■■□□□ 1.3
CDK9-203ENST00000480353 BCANQ96GW7 911 aa23.17■■□□□ 1.3
CDK9-203ENST00000480353 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
CDK9-203ENST00000480353 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
CDK9-203ENST00000480353 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
CDK9-203ENST00000480353 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
CDK9-203ENST00000480353 TOM1O60784 492 aa23.12■■□□□ 1.29
CDK9-203ENST00000480353 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
CDK9-203ENST00000480353 STRCP1A6NGW2 1772 aa23.07■■□□□ 1.28
CDK9-203ENST00000480353 PIP4K2BP78356 416 aa23.07■■□□□ 1.28
CDK9-203ENST00000480353 NAIPQ13075 1403 aa23.07■■□□□ 1.28
CDK9-203ENST00000480353 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms