RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 TSPY10P0CW01 314 aa14.58□□□□□ -0.08
LRRFIP1-211ENST00000478958 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
LRRFIP1-211ENST00000478958 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.087e-6■■□□□ 11.4
LRRFIP1-211ENST00000478958 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 PDE4CQ08493 712 aa14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
LRRFIP1-211ENST00000478958 ARID4BQ4LE39 1312 aaPredicted RBP14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 GSE1Q14687 1217 aa14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 RALBP1Q15311 655 aa14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.084e-6■□□□□ 10
LRRFIP1-211ENST00000478958 PDE4AP27815 886 aa14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 NBPF1Q3BBV0 1214 aa14.56□□□□□ -0.08
LRRFIP1-211ENST00000478958 PLEKHD1A6NEE1 506 aa14.55□□□□□ -0.08
LRRFIP1-211ENST00000478958 FGD1P98174 961 aa14.55□□□□□ -0.08
LRRFIP1-211ENST00000478958 KIAA0586Q9BVV6 1533 aa14.55□□□□□ -0.08
LRRFIP1-211ENST00000478958 BRD4O60885 1362 aaPredicted RBP14.54□□□□□ -0.08
LRRFIP1-211ENST00000478958 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
LRRFIP1-211ENST00000478958 KDM5CP41229 1560 aa14.54□□□□□ -0.08
LRRFIP1-211ENST00000478958 KIAA0556O60303 1618 aa14.53□□□□□ -0.08
LRRFIP1-211ENST00000478958 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
LRRFIP1-211ENST00000478958 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
LRRFIP1-211ENST00000478958 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
LRRFIP1-211ENST00000478958 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.08
LRRFIP1-211ENST00000478958 AAMPQ13685 434 aa14.52□□□□□ -0.09
LRRFIP1-211ENST00000478958 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
LRRFIP1-211ENST00000478958 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
LRRFIP1-211ENST00000478958 POLR1AO95602 1720 aaPredicted RBP14.51□□□□□ -0.09
LRRFIP1-211ENST00000478958 KIF14Q15058 1648 aa14.51□□□□□ -0.09
LRRFIP1-211ENST00000478958 RALGAPBQ86X10 1494 aa14.51□□□□□ -0.09
LRRFIP1-211ENST00000478958 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
LRRFIP1-211ENST00000478958 C9orf84Q5VXU9 1444 aa14.5□□□□□ -0.09
LRRFIP1-211ENST00000478958 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
LRRFIP1-211ENST00000478958 BACH2Q9BYV9 841 aa14.48□□□□□ -0.09
LRRFIP1-211ENST00000478958 UHRF1BP1Q6BDS2 1440 aa14.48□□□□□ -0.09
LRRFIP1-211ENST00000478958 PANK3Q9H999 370 aa14.48□□□□□ -0.09
LRRFIP1-211ENST00000478958 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
LRRFIP1-211ENST00000478958 RRP9O43818 475 aaKnown RBP14.47□□□□□ -0.09
LRRFIP1-211ENST00000478958 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
LRRFIP1-211ENST00000478958 SLC4A3P48751 1232 aa14.46□□□□□ -0.09
LRRFIP1-211ENST00000478958 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
LRRFIP1-211ENST00000478958 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
LRRFIP1-211ENST00000478958 ADGRL2O95490 1459 aa14.45□□□□□ -0.1
LRRFIP1-211ENST00000478958 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
LRRFIP1-211ENST00000478958 PDE3BQ13370 1112 aa14.44□□□□□ -0.1
LRRFIP1-211ENST00000478958 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
LRRFIP1-211ENST00000478958 HSP90AA1P07900 732 aaKnown RBP14.43□□□□□ -0.1
LRRFIP1-211ENST00000478958 PARD3Q8TEW0 1356 aa14.43□□□□□ -0.1
LRRFIP1-211ENST00000478958 CCDC144AA2RUR9 1427 aa14.42□□□□□ -0.1
LRRFIP1-211ENST00000478958 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
LRRFIP1-211ENST00000478958 DISP3Q9P2K9 1392 aa14.42□□□□□ -0.1
LRRFIP1-211ENST00000478958 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
LRRFIP1-211ENST00000478958 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
LRRFIP1-211ENST00000478958 ADGBQ8N7X0 1667 aa14.4□□□□□ -0.1
LRRFIP1-211ENST00000478958 NAP1L5Q96NT1 182 aaPredicted RBP14.4□□□□□ -0.1
LRRFIP1-211ENST00000478958 ITSN2Q9NZM3 1697 aa14.39□□□□□ -0.11
LRRFIP1-211ENST00000478958 MS4A1P11836 297 aa14.39□□□□□ -0.11
LRRFIP1-211ENST00000478958 TESK2Q96S53 571 aa14.39□□□□□ -0.11
LRRFIP1-211ENST00000478958 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
LRRFIP1-211ENST00000478958 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
LRRFIP1-211ENST00000478958 RGS3P49796 1198 aa14.37□□□□□ -0.11
LRRFIP1-211ENST00000478958 TMF1P82094 1093 aa14.37□□□□□ -0.11
LRRFIP1-211ENST00000478958 PRAG1Q86YV5 1406 aa14.37□□□□□ -0.11
LRRFIP1-211ENST00000478958 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
LRRFIP1-211ENST00000478958 WDR43Q15061 677 aaKnown RBP eCLIP14.36□□□□□ -0.11
LRRFIP1-211ENST00000478958 ATP10BO94823 1461 aa14.36□□□□□ -0.11
LRRFIP1-211ENST00000478958 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
LRRFIP1-211ENST00000478958 KNSTRNQ9Y448 316 aa14.35□□□□□ -0.11
LRRFIP1-211ENST00000478958 NFKBIBQ15653 356 aa14.34□□□□□ -0.11
LRRFIP1-211ENST00000478958 CROCC2H7BZ55 1655 aa14.34□□□□□ -0.11
LRRFIP1-211ENST00000478958 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
LRRFIP1-211ENST00000478958 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
LRRFIP1-211ENST00000478958 FAM135AQ9P2D6 1515 aa14.33□□□□□ -0.12
LRRFIP1-211ENST00000478958 RRAGDQ9NQL2 400 aaPredicted RBP14.32□□□□□ -0.12
LRRFIP1-211ENST00000478958 ABCC10Q5T3U5 1492 aa14.32□□□□□ -0.12
LRRFIP1-211ENST00000478958 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
LRRFIP1-211ENST00000478958 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
LRRFIP1-211ENST00000478958 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
LRRFIP1-211ENST00000478958 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 PTPRGP23470 1445 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 PPP2R1AP30153 589 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 CDC42BPAQ5VT25 1732 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 A2MP01023 1474 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
LRRFIP1-211ENST00000478958 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
LRRFIP1-211ENST00000478958 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
LRRFIP1-211ENST00000478958 PLA2R1Q13018 1463 aa14.29□□□□□ -0.12
LRRFIP1-211ENST00000478958 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
LRRFIP1-211ENST00000478958 COL17A1Q9UMD9 1497 aaPredicted RBP14.29□□□□□ -0.12
LRRFIP1-211ENST00000478958 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
LRRFIP1-211ENST00000478958 BLMP54132 1417 aaPredicted RBP14.28□□□□□ -0.12
LRRFIP1-211ENST00000478958 CCDC141Q6ZP82 1450 aa14.28□□□□□ -0.12
LRRFIP1-211ENST00000478958 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.12
LRRFIP1-211ENST00000478958 CENPQQ7L2Z9 268 aaPredicted RBP14.27□□□□□ -0.12
LRRFIP1-211ENST00000478958 E9PCH4 1651 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms