RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SHANK2Q9UPX8 1470 aa21.41■■□□□ 1.02
HDAC7-222ENST00000477937 ABCC5O15440 1437 aa21.41■■□□□ 1.02
HDAC7-222ENST00000477937 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
HDAC7-222ENST00000477937 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
HDAC7-222ENST00000477937 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
HDAC7-222ENST00000477937 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.02
HDAC7-222ENST00000477937 DAPK1P53355 1430 aa21.39■■□□□ 1.02
HDAC7-222ENST00000477937 RNF17Q9BXT8 1623 aaKnown RBP21.39■■□□□ 1.01
HDAC7-222ENST00000477937 MYO3AQ8NEV4 1616 aa21.37■■□□□ 1.01
HDAC7-222ENST00000477937 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
HDAC7-222ENST00000477937 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
HDAC7-222ENST00000477937 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
HDAC7-222ENST00000477937 ZC3H13Q5T200 1668 aaKnown RBP21.34■■□□□ 1.01
HDAC7-222ENST00000477937 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
HDAC7-222ENST00000477937 PZPP20742 1482 aa21.33■■□□□ 1.01
HDAC7-222ENST00000477937 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
HDAC7-222ENST00000477937 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
HDAC7-222ENST00000477937 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1
HDAC7-222ENST00000477937 FBXO31Q5XUX0 539 aaPredicted RBP21.32■■□□□ 1
HDAC7-222ENST00000477937 ERBINQ96RT1 1412 aa21.31■■□□□ 1
HDAC7-222ENST00000477937 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
HDAC7-222ENST00000477937 NCOA1Q15788 1441 aa21.3■■□□□ 1
HDAC7-222ENST00000477937 CFAP65Q6ZU64 1925 aaKnown RBP21.3■■□□□ 1
HDAC7-222ENST00000477937 TNRQ92752 1358 aa21.3■■□□□ 1
HDAC7-222ENST00000477937 PTPRTO14522 1441 aa21.29■■□□□ 1
HDAC7-222ENST00000477937 ABCC3O15438 1527 aa21.29■■□□□ 1
HDAC7-222ENST00000477937 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
HDAC7-222ENST00000477937 CEP152O94986 1710 aa21.29■■□□□ 1
HDAC7-222ENST00000477937 A2ML1A8K2U0 1454 aa21.28■■□□□ 1
HDAC7-222ENST00000477937 FBXO41Q8TF61 875 aa21.27■■□□□ 1
HDAC7-222ENST00000477937 PLA2R1Q13018 1463 aa21.25■□□□□ 0.99
HDAC7-222ENST00000477937 ADGRL2O95490 1459 aa21.24■□□□□ 0.99
HDAC7-222ENST00000477937 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
HDAC7-222ENST00000477937 PRDM15P57071 1507 aaPredicted RBP21.24■□□□□ 0.99
HDAC7-222ENST00000477937 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
HDAC7-222ENST00000477937 PKD2Q13563 968 aa21.23■□□□□ 0.99
HDAC7-222ENST00000477937 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
HDAC7-222ENST00000477937 CERKQ8TCT0 537 aa21.23■□□□□ 0.99
HDAC7-222ENST00000477937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
HDAC7-222ENST00000477937 KANK1Q14678 1352 aa21.22■□□□□ 0.99
HDAC7-222ENST00000477937 NLRP1Q9C000 1473 aa21.21■□□□□ 0.99
HDAC7-222ENST00000477937 SPATA31D1Q6ZQQ2 1576 aa21.2■□□□□ 0.98
HDAC7-222ENST00000477937 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
HDAC7-222ENST00000477937 ERVK-7P63135 1459 aa21.18■□□□□ 0.98
HDAC7-222ENST00000477937 ARHGAP31Q2M1Z3 1444 aa21.17■□□□□ 0.98
HDAC7-222ENST00000477937 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
HDAC7-222ENST00000477937 POLR1AO95602 1720 aaPredicted RBP21.17■□□□□ 0.98
HDAC7-222ENST00000477937 ANKRD50Q9ULJ7 1429 aa21.14■□□□□ 0.98
HDAC7-222ENST00000477937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.13■□□□□ 0.973e-16■□□□□ 8.2
HDAC7-222ENST00000477937 VWDEQ8N2E2 1590 aa21.13■□□□□ 0.97
HDAC7-222ENST00000477937 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
HDAC7-222ENST00000477937 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
HDAC7-222ENST00000477937 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
HDAC7-222ENST00000477937 ROCK1Q13464 1354 aa21.1■□□□□ 0.97
HDAC7-222ENST00000477937 ITGAEP38570 1179 aa21.1■□□□□ 0.97
HDAC7-222ENST00000477937 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
HDAC7-222ENST00000477937 NEURL4Q96JN8 1562 aa21.07■□□□□ 0.96
HDAC7-222ENST00000477937 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
HDAC7-222ENST00000477937 ZNF335Q9H4Z2 1342 aaPredicted RBP21.05■□□□□ 0.96
HDAC7-222ENST00000477937 UNC13BO14795 1591 aa21.03■□□□□ 0.96
HDAC7-222ENST00000477937 TET3O43151 1660 aa21.02■□□□□ 0.96
HDAC7-222ENST00000477937 MED14O60244 1454 aa21.02■□□□□ 0.96
HDAC7-222ENST00000477937 IQSEC2Q5JU85 1478 aa21.02■□□□□ 0.96
HDAC7-222ENST00000477937 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
HDAC7-222ENST00000477937 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
HDAC7-222ENST00000477937 GCC2Q8IWJ2 1684 aa21.02■□□□□ 0.95
HDAC7-222ENST00000477937 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
HDAC7-222ENST00000477937 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
HDAC7-222ENST00000477937 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
HDAC7-222ENST00000477937 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
HDAC7-222ENST00000477937 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
HDAC7-222ENST00000477937 IDI1Q13907 227 aa20.99■□□□□ 0.95
HDAC7-222ENST00000477937 SYNMO15061 1565 aa20.98■□□□□ 0.95
HDAC7-222ENST00000477937 NOS1P29475 1434 aa20.98■□□□□ 0.95
HDAC7-222ENST00000477937 SLC52A1Q9NWF4 448 aa20.97■□□□□ 0.95
HDAC7-222ENST00000477937 SLIT1O75093 1534 aa20.97■□□□□ 0.95
HDAC7-222ENST00000477937 ARHGAP23Q9P227 1491 aa20.96■□□□□ 0.95
HDAC7-222ENST00000477937 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
HDAC7-222ENST00000477937 EID1Q9Y6B2 187 aa20.96■□□□□ 0.95
HDAC7-222ENST00000477937 IQGAP3Q86VI3 1631 aa20.96■□□□□ 0.95
HDAC7-222ENST00000477937 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
HDAC7-222ENST00000477937 LTKP29376 864 aa20.94■□□□□ 0.94
HDAC7-222ENST00000477937 NUP155O75694 1391 aa20.94■□□□□ 0.94
HDAC7-222ENST00000477937 E9PCH4 1651 aa20.93■□□□□ 0.94
HDAC7-222ENST00000477937 CPS1P31327 1500 aa20.93■□□□□ 0.94
HDAC7-222ENST00000477937 TMEM2Q9UHN6 1383 aa20.92■□□□□ 0.94
HDAC7-222ENST00000477937 ADGRB3O60242 1522 aa20.9■□□□□ 0.94
HDAC7-222ENST00000477937 MYO5BQ9ULV0 1848 aa20.9■□□□□ 0.94
HDAC7-222ENST00000477937 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
HDAC7-222ENST00000477937 STRCP1A6NGW2 1772 aa20.86■□□□□ 0.93
HDAC7-222ENST00000477937 NAIPQ13075 1403 aa20.86■□□□□ 0.93
HDAC7-222ENST00000477937 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.93
HDAC7-222ENST00000477937 HDGFP51858 240 aaKnown RBP20.83■□□□□ 0.93
HDAC7-222ENST00000477937 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
HDAC7-222ENST00000477937 HFM1A2PYH4 1435 aa20.81■□□□□ 0.92
HDAC7-222ENST00000477937 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
HDAC7-222ENST00000477937 TOM1O60784 492 aa20.79■□□□□ 0.92
HDAC7-222ENST00000477937 BCANQ96GW7 911 aa20.79■□□□□ 0.92
HDAC7-222ENST00000477937 LRRC7Q96NW7 1537 aa20.78■□□□□ 0.92
HDAC7-222ENST00000477937 RIMS2Q9UQ26 1411 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms