RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 PTPRTO14522 1441 aa9.58□□□□□ -0.88
PRKCI-202ENST00000476635 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
PRKCI-202ENST00000476635 SCAPERQ9BY12 1400 aa9.57□□□□□ -0.88
PRKCI-202ENST00000476635 KIAA1210Q9ULL0 1709 aa9.56□□□□□ -0.88
PRKCI-202ENST00000476635 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
PRKCI-202ENST00000476635 DHX29Q7Z478 1369 aaKnown RBP9.56□□□□□ -0.88
PRKCI-202ENST00000476635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
PRKCI-202ENST00000476635 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
PRKCI-202ENST00000476635 UHRF1BP1Q6BDS2 1440 aa9.55□□□□□ -0.88
PRKCI-202ENST00000476635 KDM5AP29375 1690 aaKnown RBP9.55□□□□□ -0.88
PRKCI-202ENST00000476635 A2MP01023 1474 aa9.54□□□□□ -0.88
PRKCI-202ENST00000476635 SIGLEC1Q9BZZ2 1709 aa9.54□□□□□ -0.88
PRKCI-202ENST00000476635 NPM1P06748 294 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRKCI-202ENST00000476635 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
PRKCI-202ENST00000476635 ARHGAP31Q2M1Z3 1444 aa9.54□□□□□ -0.88
PRKCI-202ENST00000476635 ARID3CA6NKF2 412 aa9.53□□□□□ -0.88
PRKCI-202ENST00000476635 PLA2R1Q13018 1463 aa9.52□□□□□ -0.88
PRKCI-202ENST00000476635 HNRNPMP52272 730 aaKnown RBP eCLIP9.52□□□□□ -0.89
PRKCI-202ENST00000476635 ABCC3O15438 1527 aa9.52□□□□□ -0.89
PRKCI-202ENST00000476635 TSPY4P0CV99 314 aa9.52□□□□□ -0.89
PRKCI-202ENST00000476635 TSPY10P0CW01 314 aa9.52□□□□□ -0.89
PRKCI-202ENST00000476635 MPHOSPH9Q99550 1183 aa9.51□□□□□ -0.89
PRKCI-202ENST00000476635 TRPM1Q7Z4N2 1603 aa9.51□□□□□ -0.89
PRKCI-202ENST00000476635 CLTCL1P53675 1640 aa9.5□□□□□ -0.89
PRKCI-202ENST00000476635 KIF1BO60333 1816 aa9.49□□□□□ -0.89
PRKCI-202ENST00000476635 ADGRB3O60242 1522 aa9.49□□□□□ -0.89
PRKCI-202ENST00000476635 SPAG9O60271 1321 aaKnown RBP9.48□□□□□ -0.89
PRKCI-202ENST00000476635 TSPOAP1O95153 1857 aa9.48□□□□□ -0.89
PRKCI-202ENST00000476635 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
PRKCI-202ENST00000476635 PREX1Q8TCU6 1659 aa9.48□□□□□ -0.89
PRKCI-202ENST00000476635 RRP7BPQ9NSQ0 103 aa9.48□□□□□ -0.89
PRKCI-202ENST00000476635 AEBP2Q6ZN18 517 aaPredicted RBP9.47□□□□□ -0.89
PRKCI-202ENST00000476635 MADDQ8WXG6 1647 aa9.47□□□□□ -0.89
PRKCI-202ENST00000476635 PPLO60437 1756 aa9.47□□□□□ -0.89
PRKCI-202ENST00000476635 SPATA31E1Q6ZUB1 1445 aa9.47□□□□□ -0.89
PRKCI-202ENST00000476635 MYOM2P54296 1465 aa9.46□□□□□ -0.89
PRKCI-202ENST00000476635 RALGAPBQ86X10 1494 aa9.46□□□□□ -0.89
PRKCI-202ENST00000476635 NOS1P29475 1434 aa9.46□□□□□ -0.89
PRKCI-202ENST00000476635 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.9
PRKCI-202ENST00000476635 SYNMO15061 1565 aa9.46□□□□□ -0.9
PRKCI-202ENST00000476635 IQGAP1P46940 1657 aa9.45□□□□□ -0.9
PRKCI-202ENST00000476635 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
PRKCI-202ENST00000476635 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
PRKCI-202ENST00000476635 PPP6R1Q9UPN7 881 aa9.45□□□□□ -0.9
PRKCI-202ENST00000476635 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
PRKCI-202ENST00000476635 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
PRKCI-202ENST00000476635 ITGAEP38570 1179 aa9.44□□□□□ -0.9
PRKCI-202ENST00000476635 NUP155O75694 1391 aa9.44□□□□□ -0.9
PRKCI-202ENST00000476635 PPP1R15AO75807 674 aaPredicted RBP9.43□□□□□ -0.9
PRKCI-202ENST00000476635 ZNF777Q9ULD5 760 aaPredicted RBP9.43□□□□□ -0.9
PRKCI-202ENST00000476635 COL17A1Q9UMD9 1497 aaPredicted RBP9.43□□□□□ -0.9
PRKCI-202ENST00000476635 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
PRKCI-202ENST00000476635 CYB5RLQ6IPT4 315 aa9.43□□□□□ -0.9
PRKCI-202ENST00000476635 GPRASP1Q5JY77 1395 aa9.42□□□□□ -0.9
PRKCI-202ENST00000476635 UGGT1Q9NYU2 1555 aa9.42□□□□□ -0.9
PRKCI-202ENST00000476635 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
PRKCI-202ENST00000476635 YEATS2Q9ULM3 1422 aa9.41□□□□□ -0.9
PRKCI-202ENST00000476635 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
PRKCI-202ENST00000476635 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
PRKCI-202ENST00000476635 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
PRKCI-202ENST00000476635 KANK1Q14678 1352 aa9.4□□□□□ -0.9
PRKCI-202ENST00000476635 NPATQ14207 1427 aa9.39□□□□□ -0.91
PRKCI-202ENST00000476635 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
PRKCI-202ENST00000476635 ZFYVE9O95405 1425 aa9.38□□□□□ -0.91
PRKCI-202ENST00000476635 PRAG1Q86YV5 1406 aa9.38□□□□□ -0.91
PRKCI-202ENST00000476635 SLC4A1APQ9BWU0 796 aaKnown RBP9.37□□□□□ -0.91
PRKCI-202ENST00000476635 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
PRKCI-202ENST00000476635 TONSLQ96HA7 1378 aa9.37□□□□□ -0.91
PRKCI-202ENST00000476635 DNAJC5Q9H3Z4 198 aa9.37□□□□□ -0.91
PRKCI-202ENST00000476635 CCDC144AA2RUR9 1427 aa9.37□□□□□ -0.91
PRKCI-202ENST00000476635 FAM69CQ0P6D2 419 aa9.36□□□□□ -0.91
PRKCI-202ENST00000476635 PKD2Q13563 968 aa9.36□□□□□ -0.91
PRKCI-202ENST00000476635 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
PRKCI-202ENST00000476635 ADAMTSL3P82987 1691 aa9.36□□□□□ -0.91
PRKCI-202ENST00000476635 ERVK-7P63135 1459 aa9.36□□□□□ -0.91
PRKCI-202ENST00000476635 SIN3AQ96ST3 1273 aa9.35□□□□□ -0.91
PRKCI-202ENST00000476635 MYO5BQ9ULV0 1848 aa9.35□□□□□ -0.91
PRKCI-202ENST00000476635 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
PRKCI-202ENST00000476635 KNDC1Q76NI1 1749 aa9.34□□□□□ -0.91
PRKCI-202ENST00000476635 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
PRKCI-202ENST00000476635 C3P01024 1663 aa9.33□□□□□ -0.92
PRKCI-202ENST00000476635 UBR1Q8IWV7 1749 aa9.33□□□□□ -0.92
PRKCI-202ENST00000476635 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
PRKCI-202ENST00000476635 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
PRKCI-202ENST00000476635 ARID4BQ4LE39 1312 aaPredicted RBP9.31□□□□□ -0.92
PRKCI-202ENST00000476635 PIK3C2GO75747 1445 aa9.3□□□□□ -0.92
PRKCI-202ENST00000476635 NRXN3Q9Y4C0 1643 aa9.3□□□□□ -0.92
PRKCI-202ENST00000476635 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
PRKCI-202ENST00000476635 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
PRKCI-202ENST00000476635 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
PRKCI-202ENST00000476635 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
PRKCI-202ENST00000476635 MYOM1P52179 1685 aa9.27□□□□□ -0.92
PRKCI-202ENST00000476635 DLC1Q96QB1 1528 aa9.27□□□□□ -0.93
PRKCI-202ENST00000476635 SLIT1O75093 1534 aa9.27□□□□□ -0.93
PRKCI-202ENST00000476635 NLRP1Q9C000 1473 aa9.26□□□□□ -0.93
PRKCI-202ENST00000476635 KIF3BO15066 747 aa9.26□□□□□ -0.93
PRKCI-202ENST00000476635 DIP2AQ14689 1571 aa9.26□□□□□ -0.93
PRKCI-202ENST00000476635 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
PRKCI-202ENST00000476635 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
PRKCI-202ENST00000476635 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms