RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 RNF17Q9BXT8 1623 aaKnown RBP32.77■■■□□ 2.84
LIME1-204ENST00000476183 PPARGC1BQ86YN6 1023 aaKnown RBP32.77■■■□□ 2.84
LIME1-204ENST00000476183 KIF15Q9NS87 1388 aa32.77■■■□□ 2.84
LIME1-204ENST00000476183 EIF2AK4Q9P2K8 1649 aaKnown RBP32.77■■■□□ 2.84
LIME1-204ENST00000476183 KDM5DQ9BY66 1539 aa32.76■■■□□ 2.83
LIME1-204ENST00000476183 FAM50AQ14320 339 aaKnown RBP32.75■■■□□ 2.83
LIME1-204ENST00000476183 RRP7BPQ9NSQ0 103 aa32.75■■■□□ 2.83
LIME1-204ENST00000476183 FAM135AQ9P2D6 1515 aa32.75■■■□□ 2.83
LIME1-204ENST00000476183 CHIC2Q9UKJ5 165 aa32.73■■■□□ 2.83
LIME1-204ENST00000476183 WASHC2CQ9Y4E1 1318 aa32.73■■■□□ 2.83
LIME1-204ENST00000476183 MROH1Q8NDA8 1641 aa32.7■■■□□ 2.83
LIME1-204ENST00000476183 ANKRD30AQ9BXX3 1397 aa32.67■■■□□ 2.82
LIME1-204ENST00000476183 ERBINQ96RT1 1412 aa32.67■■■□□ 2.82
LIME1-204ENST00000476183 NCOA1Q15788 1441 aa32.66■■■□□ 2.82
LIME1-204ENST00000476183 ABCC3O15438 1527 aa32.66■■■□□ 2.82
LIME1-204ENST00000476183 MYO3AQ8NEV4 1616 aa32.66■■■□□ 2.82
LIME1-204ENST00000476183 STRCQ7RTU9 1775 aa32.65■■■□□ 2.82
LIME1-204ENST00000476183 PZPP20742 1482 aa32.65■■■□□ 2.82
LIME1-204ENST00000476183 ADGRL2O95490 1459 aa32.64■■■□□ 2.82
LIME1-204ENST00000476183 FBXO31Q5XUX0 539 aaPredicted RBP32.64■■■□□ 2.82
LIME1-204ENST00000476183 ZC3H13Q5T200 1668 aaKnown RBP32.61■■■□□ 2.81
LIME1-204ENST00000476183 ZNF142P52746 1687 aaPredicted RBP32.59■■■□□ 2.81
LIME1-204ENST00000476183 CEP152O94986 1710 aa32.58■■■□□ 2.81
LIME1-204ENST00000476183 CEP170BQ9Y4F5 1589 aaPredicted RBP32.58■■■□□ 2.81
LIME1-204ENST00000476183 PRDM15P57071 1507 aaPredicted RBP32.57■■■□□ 2.8
LIME1-204ENST00000476183 TNRQ92752 1358 aa32.56■■■□□ 2.8
LIME1-204ENST00000476183 DEPDC5O75140 1603 aa32.55■■■□□ 2.8
LIME1-204ENST00000476183 CAMSAP1Q5T5Y3 1602 aa32.54■■■□□ 2.8
LIME1-204ENST00000476183 A2ML1A8K2U0 1454 aa32.51■■■□□ 2.79
LIME1-204ENST00000476183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.51■■■□□ 2.79
LIME1-204ENST00000476183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.48■■■□□ 2.79
LIME1-204ENST00000476183 DMRT2Q9Y5R5 561 aa32.47■■■□□ 2.79
LIME1-204ENST00000476183 SPATA31D1Q6ZQQ2 1576 aa32.46■■■□□ 2.79
LIME1-204ENST00000476183 ANKRD50Q9ULJ7 1429 aa32.46■■■□□ 2.79
LIME1-204ENST00000476183 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
LIME1-204ENST00000476183 VWDEQ8N2E2 1590 aa32.45■■■□□ 2.78
LIME1-204ENST00000476183 CFAP65Q6ZU64 1925 aaKnown RBP32.44■■■□□ 2.78
LIME1-204ENST00000476183 PTPRTO14522 1441 aa32.43■■■□□ 2.78
LIME1-204ENST00000476183 ITGAEP38570 1179 aa32.43■■■□□ 2.78
LIME1-204ENST00000476183 ROCK1Q13464 1354 aa32.43■■■□□ 2.78
LIME1-204ENST00000476183 PLA2R1Q13018 1463 aa32.42■■■□□ 2.78
LIME1-204ENST00000476183 NCKAP5LQ9HCH0 1330 aa32.42■■■□□ 2.78
LIME1-204ENST00000476183 KANK1Q14678 1352 aa32.42■■■□□ 2.78
LIME1-204ENST00000476183 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
LIME1-204ENST00000476183 ILDR1Q86SU0 546 aaPredicted RBP32.41■■■□□ 2.78
LIME1-204ENST00000476183 RRBP1Q9P2E9 1410 aaKnown RBP32.41■■■□□ 2.78
LIME1-204ENST00000476183 NLRP1Q9C000 1473 aa32.41■■■□□ 2.78
LIME1-204ENST00000476183 LMTK2Q8IWU2 1503 aa32.39■■■□□ 2.78
LIME1-204ENST00000476183 PKD2Q13563 968 aa32.34■■■□□ 2.77
LIME1-204ENST00000476183 UGGT1Q9NYU2 1555 aa32.33■■■□□ 2.77
LIME1-204ENST00000476183 EFCAB6Q5THR3 1501 aa32.29■■■□□ 2.76
LIME1-204ENST00000476183 UNC13BO14795 1591 aa32.28■■■□□ 2.76
LIME1-204ENST00000476183 THEMISQ8N1K5 641 aaPredicted RBP32.27■■■□□ 2.76
LIME1-204ENST00000476183 CERKQ8TCT0 537 aa32.26■■■□□ 2.75
LIME1-204ENST00000476183 POLR1AO95602 1720 aaPredicted RBP32.24■■■□□ 2.75
LIME1-204ENST00000476183 NEURL4Q96JN8 1562 aa32.24■■■□□ 2.75
LIME1-204ENST00000476183 FBXO41Q8TF61 875 aa32.22■■■□□ 2.75
LIME1-204ENST00000476183 UBR1Q8IWV7 1749 aa32.22■■■□□ 2.75
LIME1-204ENST00000476183 TET3O43151 1660 aa32.21■■■□□ 2.75
LIME1-204ENST00000476183 NOS1P29475 1434 aa32.2■■■□□ 2.75
LIME1-204ENST00000476183 LTBP4Q8N2S1 1624 aa32.2■■■□□ 2.75
LIME1-204ENST00000476183 SYNMO15061 1565 aa32.19■■■□□ 2.74
LIME1-204ENST00000476183 ANKLE2Q86XL3 938 aa32.19■■■□□ 2.74
LIME1-204ENST00000476183 PIK3C2BO00750 1634 aa32.17■■■□□ 2.74
LIME1-204ENST00000476183 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
LIME1-204ENST00000476183 IQGAP3Q86VI3 1631 aa32.15■■■□□ 2.74
LIME1-204ENST00000476183 GCC2Q8IWJ2 1684 aa32.15■■■□□ 2.74
LIME1-204ENST00000476183 ZNF335Q9H4Z2 1342 aaPredicted RBP32.15■■■□□ 2.74
LIME1-204ENST00000476183 IDI1Q13907 227 aa32.13■■■□□ 2.73
LIME1-204ENST00000476183 MED14O60244 1454 aa32.12■■■□□ 2.73
LIME1-204ENST00000476183 NUP155O75694 1391 aa32.12■■■□□ 2.73
LIME1-204ENST00000476183 NAIPQ13075 1403 aa32.11■■■□□ 2.73
LIME1-204ENST00000476183 NPHP4O75161 1426 aaPredicted RBP32.09■■■□□ 2.73
LIME1-204ENST00000476183 E9PCH4 1651 aa32.09■■■□□ 2.73
LIME1-204ENST00000476183 ARHGAP23Q9P227 1491 aa32.09■■■□□ 2.73
LIME1-204ENST00000476183 SLIT1O75093 1534 aa32.08■■■□□ 2.73
LIME1-204ENST00000476183 KDM5AP29375 1690 aaKnown RBP32.05■■■□□ 2.72
LIME1-204ENST00000476183 IQGAP1P46940 1657 aa32.05■■■□□ 2.72
LIME1-204ENST00000476183 LTKP29376 864 aa32.04■■■□□ 2.72
LIME1-204ENST00000476183 SLC52A1Q9NWF4 448 aa32.04■■■□□ 2.72
LIME1-204ENST00000476183 STAG3Q9UJ98 1225 aa32.03■■■□□ 2.72
LIME1-204ENST00000476183 SCAF11Q99590 1463 aaKnown RBP32.03■■■□□ 2.72
LIME1-204ENST00000476183 HFM1A2PYH4 1435 aa32.02■■■□□ 2.72
LIME1-204ENST00000476183 TMEM2Q9UHN6 1383 aa32.02■■■□□ 2.72
LIME1-204ENST00000476183 ADGRB3O60242 1522 aa32.01■■■□□ 2.72
LIME1-204ENST00000476183 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
LIME1-204ENST00000476183 IQSEC2Q5JU85 1478 aa31.96■■■□□ 2.71
LIME1-204ENST00000476183 EID1Q9Y6B2 187 aa31.94■■■□□ 2.7
LIME1-204ENST00000476183 MYO5BQ9ULV0 1848 aa31.93■■■□□ 2.7
LIME1-204ENST00000476183 TMEM131LA2VDJ0 1609 aa31.91■■■□□ 2.7
LIME1-204ENST00000476183 CPS1P31327 1500 aa31.88■■■□□ 2.69
LIME1-204ENST00000476183 STRCP1A6NGW2 1772 aa31.86■■■□□ 2.69
LIME1-204ENST00000476183 SPHKAPQ2M3C7 1700 aa31.85■■■□□ 2.69
LIME1-204ENST00000476183 ZFYVE9O95405 1425 aa31.84■■■□□ 2.69
LIME1-204ENST00000476183 TRIM52Q96A61 297 aa31.84■■■□□ 2.69
LIME1-204ENST00000476183 CHGAP10645 457 aaKnown RBP31.83■■■□□ 2.69
LIME1-204ENST00000476183 RIMS2Q9UQ26 1411 aa31.81■■■□□ 2.68
LIME1-204ENST00000476183 SLC26A8Q96RN1 970 aa31.75■■■□□ 2.67
LIME1-204ENST00000476183 TRPM2O94759 1503 aa31.74■■■□□ 2.67
LIME1-204ENST00000476183 UBAP1LF5GYI3 381 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms