RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 PODXL2Q9NZ53 605 aa15.93■□□□□ 0.14
SKIV2L-208ENST00000474839 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
SKIV2L-208ENST00000474839 C20orf194Q5TEA3 1177 aa15.93■□□□□ 0.14
SKIV2L-208ENST00000474839 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
SKIV2L-208ENST00000474839 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
SKIV2L-208ENST00000474839 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
SKIV2L-208ENST00000474839 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
SKIV2L-208ENST00000474839 PANK3Q9H999 370 aa15.9■□□□□ 0.14
SKIV2L-208ENST00000474839 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
SKIV2L-208ENST00000474839 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
SKIV2L-208ENST00000474839 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
SKIV2L-208ENST00000474839 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
SKIV2L-208ENST00000474839 ARXQ96QS3 562 aa15.89■□□□□ 0.13
SKIV2L-208ENST00000474839 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
SKIV2L-208ENST00000474839 ANKRD30AQ9BXX3 1397 aa15.88■□□□□ 0.13
SKIV2L-208ENST00000474839 NUP160Q12769 1436 aa15.88■□□□□ 0.13
SKIV2L-208ENST00000474839 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
SKIV2L-208ENST00000474839 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
SKIV2L-208ENST00000474839 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
SKIV2L-208ENST00000474839 PKNOX2Q96KN3 472 aa15.86■□□□□ 0.13
SKIV2L-208ENST00000474839 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
SKIV2L-208ENST00000474839 ANKRD50Q9ULJ7 1429 aa15.86■□□□□ 0.13
SKIV2L-208ENST00000474839 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
SKIV2L-208ENST00000474839 CHD1O14646 1710 aa15.85■□□□□ 0.13
SKIV2L-208ENST00000474839 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
SKIV2L-208ENST00000474839 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
SKIV2L-208ENST00000474839 BRD4O60885 1362 aaPredicted RBP15.84■□□□□ 0.13
SKIV2L-208ENST00000474839 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
SKIV2L-208ENST00000474839 PZPP20742 1482 aa15.84■□□□□ 0.13
SKIV2L-208ENST00000474839 KIAA0556O60303 1618 aa15.84■□□□□ 0.13
SKIV2L-208ENST00000474839 ARHGEF11O15085 1522 aa15.83■□□□□ 0.13
SKIV2L-208ENST00000474839 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
SKIV2L-208ENST00000474839 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
SKIV2L-208ENST00000474839 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
SKIV2L-208ENST00000474839 NFKBIBQ15653 356 aa15.8■□□□□ 0.12
SKIV2L-208ENST00000474839 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
SKIV2L-208ENST00000474839 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
SKIV2L-208ENST00000474839 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
SKIV2L-208ENST00000474839 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
SKIV2L-208ENST00000474839 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
SKIV2L-208ENST00000474839 CAMSAP2Q08AD1 1489 aa15.79■□□□□ 0.12
SKIV2L-208ENST00000474839 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
SKIV2L-208ENST00000474839 MS4A1P11836 297 aa15.78■□□□□ 0.12
SKIV2L-208ENST00000474839 TMF1P82094 1093 aa15.76■□□□□ 0.11
SKIV2L-208ENST00000474839 GSE1Q14687 1217 aa15.76■□□□□ 0.11
SKIV2L-208ENST00000474839 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
SKIV2L-208ENST00000474839 LRPPRCP42704 1394 aaKnown RBP15.76■□□□□ 0.11
SKIV2L-208ENST00000474839 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
SKIV2L-208ENST00000474839 FRAT2O75474 233 aaPredicted RBP15.74■□□□□ 0.11
SKIV2L-208ENST00000474839 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
SKIV2L-208ENST00000474839 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 USP35Q9P2H5 1018 aa15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 ATP10BO94823 1461 aa15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 SPRYD3Q8NCJ5 442 aa15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
SKIV2L-208ENST00000474839 GPATCH8Q9UKJ3 1502 aaKnown RBP15.72■□□□□ 0.11
SKIV2L-208ENST00000474839 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
SKIV2L-208ENST00000474839 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.11
SKIV2L-208ENST00000474839 BCAR3O75815 825 aa15.71■□□□□ 0.11
SKIV2L-208ENST00000474839 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
SKIV2L-208ENST00000474839 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
SKIV2L-208ENST00000474839 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
SKIV2L-208ENST00000474839 APAF1O14727 1248 aa15.7■□□□□ 0.1
SKIV2L-208ENST00000474839 DNMT1P26358 1616 aaKnown RBP15.7■□□□□ 0.1
SKIV2L-208ENST00000474839 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
SKIV2L-208ENST00000474839 C9orf84Q5VXU9 1444 aa15.7■□□□□ 0.1
SKIV2L-208ENST00000474839 FAM161AQ3B820 660 aa15.7■□□□□ 0.1
SKIV2L-208ENST00000474839 CENPQQ7L2Z9 268 aaPredicted RBP15.67■□□□□ 0.1
SKIV2L-208ENST00000474839 KDM5CP41229 1560 aa15.67■□□□□ 0.1
SKIV2L-208ENST00000474839 RALGAPBQ86X10 1494 aa15.66■□□□□ 0.1
SKIV2L-208ENST00000474839 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
SKIV2L-208ENST00000474839 PARD3Q8TEW0 1356 aa15.66■□□□□ 0.1
SKIV2L-208ENST00000474839 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
SKIV2L-208ENST00000474839 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
SKIV2L-208ENST00000474839 COG6Q9Y2V7 657 aa15.65■□□□□ 0.1
SKIV2L-208ENST00000474839 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
SKIV2L-208ENST00000474839 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
SKIV2L-208ENST00000474839 TESK2Q96S53 571 aa15.65■□□□□ 0.1
SKIV2L-208ENST00000474839 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
SKIV2L-208ENST00000474839 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
SKIV2L-208ENST00000474839 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
SKIV2L-208ENST00000474839 KIF14Q15058 1648 aa15.63■□□□□ 0.09
SKIV2L-208ENST00000474839 PLEKHH1Q9ULM0 1364 aa15.63■□□□□ 0.09
SKIV2L-208ENST00000474839 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
SKIV2L-208ENST00000474839 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
SKIV2L-208ENST00000474839 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
SKIV2L-208ENST00000474839 IGHDP01880 384 aa15.6■□□□□ 0.09
SKIV2L-208ENST00000474839 GZF1Q9H116 711 aaPredicted RBP15.6■□□□□ 0.09
SKIV2L-208ENST00000474839 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
SKIV2L-208ENST00000474839 ERBINQ96RT1 1412 aa15.59■□□□□ 0.09
SKIV2L-208ENST00000474839 SEC24BO95487 1268 aa15.58■□□□□ 0.09
SKIV2L-208ENST00000474839 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
SKIV2L-208ENST00000474839 WASHC2CQ9Y4E1 1318 aa15.57■□□□□ 0.08
SKIV2L-208ENST00000474839 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
SKIV2L-208ENST00000474839 POGKQ9P215 609 aa15.56■□□□□ 0.08
SKIV2L-208ENST00000474839 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
SKIV2L-208ENST00000474839 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
SKIV2L-208ENST00000474839 ABCA8O94911 1581 aa15.54■□□□□ 0.08
SKIV2L-208ENST00000474839 TNNQ9UQP3 1299 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms