RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
MACF1-215ENST00000473843 GGT6Q6P531 493 aa18.66■□□□□ 0.58
MACF1-215ENST00000473843 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
MACF1-215ENST00000473843 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.58
MACF1-215ENST00000473843 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
MACF1-215ENST00000473843 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
MACF1-215ENST00000473843 TNRQ92752 1358 aa18.64■□□□□ 0.57
MACF1-215ENST00000473843 NPHP4O75161 1426 aaPredicted RBP18.64■□□□□ 0.57
MACF1-215ENST00000473843 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
MACF1-215ENST00000473843 CCDC18Q5T9S5 1454 aa18.62■□□□□ 0.57
MACF1-215ENST00000473843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
MACF1-215ENST00000473843 POTEAQ6S8J7 498 aa18.61■□□□□ 0.57
MACF1-215ENST00000473843 PZPP20742 1482 aa18.59■□□□□ 0.57
MACF1-215ENST00000473843 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
MACF1-215ENST00000473843 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
MACF1-215ENST00000473843 UGGT1Q9NYU2 1555 aa18.59■□□□□ 0.57
MACF1-215ENST00000473843 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.57
MACF1-215ENST00000473843 KIAA1107Q9UPP5 1409 aa18.58■□□□□ 0.57
MACF1-215ENST00000473843 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
MACF1-215ENST00000473843 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
MACF1-215ENST00000473843 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
MACF1-215ENST00000473843 THEMISQ8N1K5 641 aaPredicted RBP18.57■□□□□ 0.56
MACF1-215ENST00000473843 KDM5DQ9BY66 1539 aa18.55■□□□□ 0.56
MACF1-215ENST00000473843 GPATCH8Q9UKJ3 1502 aaKnown RBP18.55■□□□□ 0.56
MACF1-215ENST00000473843 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
MACF1-215ENST00000473843 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
MACF1-215ENST00000473843 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
MACF1-215ENST00000473843 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
MACF1-215ENST00000473843 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
MACF1-215ENST00000473843 MIA2Q96PC5 1412 aa18.5■□□□□ 0.55
MACF1-215ENST00000473843 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
MACF1-215ENST00000473843 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
MACF1-215ENST00000473843 DHX29Q7Z478 1369 aaKnown RBP18.46■□□□□ 0.55
MACF1-215ENST00000473843 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
MACF1-215ENST00000473843 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
MACF1-215ENST00000473843 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
MACF1-215ENST00000473843 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
MACF1-215ENST00000473843 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
MACF1-215ENST00000473843 KIF3BO15066 747 aa18.41■□□□□ 0.54
MACF1-215ENST00000473843 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
MACF1-215ENST00000473843 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.54
MACF1-215ENST00000473843 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
MACF1-215ENST00000473843 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.54
MACF1-215ENST00000473843 MBD5Q9P267 1494 aa18.39■□□□□ 0.53
MACF1-215ENST00000473843 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
MACF1-215ENST00000473843 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
MACF1-215ENST00000473843 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
MACF1-215ENST00000473843 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
MACF1-215ENST00000473843 TIAM1Q13009 1591 aa18.34■□□□□ 0.53
MACF1-215ENST00000473843 ERVK-7P63135 1459 aa18.33■□□□□ 0.53
MACF1-215ENST00000473843 SLIT1O75093 1534 aa18.33■□□□□ 0.52
MACF1-215ENST00000473843 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
MACF1-215ENST00000473843 JCADQ9P266 1359 aa18.31■□□□□ 0.52
MACF1-215ENST00000473843 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
MACF1-215ENST00000473843 ABCC3O15438 1527 aa18.31■□□□□ 0.52
MACF1-215ENST00000473843 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
MACF1-215ENST00000473843 NCOA2Q15596 1464 aa18.3■□□□□ 0.52
MACF1-215ENST00000473843 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
MACF1-215ENST00000473843 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
MACF1-215ENST00000473843 LTKP29376 864 aa18.27■□□□□ 0.52
MACF1-215ENST00000473843 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
MACF1-215ENST00000473843 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
MACF1-215ENST00000473843 LRP6O75581 1613 aa18.25■□□□□ 0.51
MACF1-215ENST00000473843 COL16A1Q07092 1604 aaPredicted RBP18.25■□□□□ 0.51
MACF1-215ENST00000473843 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
MACF1-215ENST00000473843 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
MACF1-215ENST00000473843 CEP152O94986 1710 aa18.24■□□□□ 0.51
MACF1-215ENST00000473843 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
MACF1-215ENST00000473843 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
MACF1-215ENST00000473843 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
MACF1-215ENST00000473843 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
MACF1-215ENST00000473843 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
MACF1-215ENST00000473843 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
MACF1-215ENST00000473843 CAMSAP2Q08AD1 1489 aa18.21■□□□□ 0.51
MACF1-215ENST00000473843 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
MACF1-215ENST00000473843 NWD1Q149M9 1564 aa18.21■□□□□ 0.51
MACF1-215ENST00000473843 SPATA31A6Q5VVP1 1343 aa18.21■□□□□ 0.51
MACF1-215ENST00000473843 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
MACF1-215ENST00000473843 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
MACF1-215ENST00000473843 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
MACF1-215ENST00000473843 KCNA6P17658 529 aa18.2■□□□□ 0.5
MACF1-215ENST00000473843 RSPH4AQ5TD94 716 aa18.19■□□□□ 0.5
MACF1-215ENST00000473843 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
MACF1-215ENST00000473843 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
MACF1-215ENST00000473843 MSH6P52701 1360 aa18.18■□□□□ 0.5
MACF1-215ENST00000473843 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
MACF1-215ENST00000473843 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
MACF1-215ENST00000473843 RXRBP28702 533 aa18.17■□□□□ 0.5
MACF1-215ENST00000473843 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
MACF1-215ENST00000473843 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
MACF1-215ENST00000473843 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
MACF1-215ENST00000473843 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
MACF1-215ENST00000473843 TMEM2Q9UHN6 1383 aa18.16■□□□□ 0.5
MACF1-215ENST00000473843 TET3O43151 1660 aa18.15■□□□□ 0.5
MACF1-215ENST00000473843 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
MACF1-215ENST00000473843 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
MACF1-215ENST00000473843 ARHGAP31Q2M1Z3 1444 aa18.12■□□□□ 0.49
MACF1-215ENST00000473843 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
MACF1-215ENST00000473843 EFCAB6Q5THR3 1501 aa18.11■□□□□ 0.49
MACF1-215ENST00000473843 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms