RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
MACF1-215ENST00000473843 ABCC9O60706 1549 aa27.23■■□□□ 1.95
MACF1-215ENST00000473843 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
MACF1-215ENST00000473843 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
MACF1-215ENST00000473843 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
MACF1-215ENST00000473843 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
MACF1-215ENST00000473843 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
MACF1-215ENST00000473843 NACADO15069 1562 aa25.26■■□□□ 1.63
MACF1-215ENST00000473843 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
MACF1-215ENST00000473843 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
MACF1-215ENST00000473843 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
MACF1-215ENST00000473843 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
MACF1-215ENST00000473843 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
MACF1-215ENST00000473843 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
MACF1-215ENST00000473843 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
MACF1-215ENST00000473843 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
MACF1-215ENST00000473843 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
MACF1-215ENST00000473843 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
MACF1-215ENST00000473843 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
MACF1-215ENST00000473843 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
MACF1-215ENST00000473843 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
MACF1-215ENST00000473843 CUX2O14529 1486 aa23.87■■□□□ 1.41
MACF1-215ENST00000473843 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
MACF1-215ENST00000473843 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
MACF1-215ENST00000473843 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
MACF1-215ENST00000473843 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
MACF1-215ENST00000473843 NESP48681 1621 aa23.16■■□□□ 1.3
MACF1-215ENST00000473843 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
MACF1-215ENST00000473843 ATAD2BQ9ULI0 1458 aa23.09■■□□□ 1.29
MACF1-215ENST00000473843 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
MACF1-215ENST00000473843 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
MACF1-215ENST00000473843 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
MACF1-215ENST00000473843 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
MACF1-215ENST00000473843 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
MACF1-215ENST00000473843 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
MACF1-215ENST00000473843 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
MACF1-215ENST00000473843 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
MACF1-215ENST00000473843 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
MACF1-215ENST00000473843 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
MACF1-215ENST00000473843 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
MACF1-215ENST00000473843 WDR62O43379 1518 aa22.65■■□□□ 1.22
MACF1-215ENST00000473843 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
MACF1-215ENST00000473843 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
MACF1-215ENST00000473843 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
MACF1-215ENST00000473843 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
MACF1-215ENST00000473843 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
MACF1-215ENST00000473843 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
MACF1-215ENST00000473843 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
MACF1-215ENST00000473843 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
MACF1-215ENST00000473843 ARHGEF11O15085 1522 aa22.28■■□□□ 1.16
MACF1-215ENST00000473843 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
MACF1-215ENST00000473843 CFTRP13569 1480 aa22.11■■□□□ 1.13
MACF1-215ENST00000473843 WIZO95785 1651 aa22.11■■□□□ 1.13
MACF1-215ENST00000473843 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
MACF1-215ENST00000473843 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
MACF1-215ENST00000473843 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
MACF1-215ENST00000473843 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
MACF1-215ENST00000473843 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
MACF1-215ENST00000473843 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
MACF1-215ENST00000473843 CHD1O14646 1710 aa21.92■■□□□ 1.1
MACF1-215ENST00000473843 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
MACF1-215ENST00000473843 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
MACF1-215ENST00000473843 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
MACF1-215ENST00000473843 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
MACF1-215ENST00000473843 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
MACF1-215ENST00000473843 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
MACF1-215ENST00000473843 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.064e-7■■■■■ 71.6
MACF1-215ENST00000473843 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
MACF1-215ENST00000473843 FBLN2P98095 1184 aa21.65■■□□□ 1.06
MACF1-215ENST00000473843 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
MACF1-215ENST00000473843 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
MACF1-215ENST00000473843 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
MACF1-215ENST00000473843 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
MACF1-215ENST00000473843 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
MACF1-215ENST00000473843 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
MACF1-215ENST00000473843 FOXD1Q16676 465 aa21.42■■□□□ 1.02
MACF1-215ENST00000473843 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
MACF1-215ENST00000473843 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
MACF1-215ENST00000473843 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
MACF1-215ENST00000473843 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
MACF1-215ENST00000473843 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
MACF1-215ENST00000473843 SOGA1O94964 1423 aa21.34■■□□□ 1.01
MACF1-215ENST00000473843 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
MACF1-215ENST00000473843 GRIN2BQ13224 1484 aa21.29■■□□□ 1
MACF1-215ENST00000473843 KIF13AQ9H1H9 1805 aa21.26■□□□□ 0.99
MACF1-215ENST00000473843 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
MACF1-215ENST00000473843 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
MACF1-215ENST00000473843 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
MACF1-215ENST00000473843 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
MACF1-215ENST00000473843 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
MACF1-215ENST00000473843 CUX1P39880 1505 aa21.09■□□□□ 0.97
MACF1-215ENST00000473843 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
MACF1-215ENST00000473843 SHROOM2Q13796 1616 aa21.04■□□□□ 0.96
MACF1-215ENST00000473843 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
MACF1-215ENST00000473843 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
MACF1-215ENST00000473843 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
MACF1-215ENST00000473843 NUP160Q12769 1436 aa20.99■□□□□ 0.95
MACF1-215ENST00000473843 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
MACF1-215ENST00000473843 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
MACF1-215ENST00000473843 KDM6BO15054 1643 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms