RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
SMURF1-203ENST00000472627 ANKLE2Q86XL3 938 aa22.66■■□□□ 1.22
SMURF1-203ENST00000472627 FAM135AQ9P2D6 1515 aa22.65■■□□□ 1.22
SMURF1-203ENST00000472627 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
SMURF1-203ENST00000472627 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
SMURF1-203ENST00000472627 NEURL4Q96JN8 1562 aa22.63■■□□□ 1.21
SMURF1-203ENST00000472627 PZPP20742 1482 aa22.62■■□□□ 1.21
SMURF1-203ENST00000472627 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
SMURF1-203ENST00000472627 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
SMURF1-203ENST00000472627 KIF3BO15066 747 aa22.59■■□□□ 1.21
SMURF1-203ENST00000472627 NLRP1Q9C000 1473 aa22.59■■□□□ 1.21
SMURF1-203ENST00000472627 WASHC2CQ9Y4E1 1318 aa22.58■■□□□ 1.21
SMURF1-203ENST00000472627 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
SMURF1-203ENST00000472627 FBXO31Q5XUX0 539 aaPredicted RBP22.57■■□□□ 1.2
SMURF1-203ENST00000472627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMURF1-203ENST00000472627 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
SMURF1-203ENST00000472627 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
SMURF1-203ENST00000472627 MBD5Q9P267 1494 aa22.55■■□□□ 1.2
SMURF1-203ENST00000472627 DEPDC5O75140 1603 aa22.55■■□□□ 1.2
SMURF1-203ENST00000472627 MED14O60244 1454 aa22.54■■□□□ 1.2
SMURF1-203ENST00000472627 MIA2Q96PC5 1412 aa22.54■■□□□ 1.2
SMURF1-203ENST00000472627 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
SMURF1-203ENST00000472627 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
SMURF1-203ENST00000472627 TIAM1Q13009 1591 aa22.52■■□□□ 1.2
SMURF1-203ENST00000472627 RSPH4AQ5TD94 716 aa22.52■■□□□ 1.2
SMURF1-203ENST00000472627 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
SMURF1-203ENST00000472627 CCDC141Q6ZP82 1450 aa22.51■■□□□ 1.19
SMURF1-203ENST00000472627 IQGAP1P46940 1657 aa22.49■■□□□ 1.19
SMURF1-203ENST00000472627 SYNMO15061 1565 aa22.49■■□□□ 1.19
SMURF1-203ENST00000472627 RNF17Q9BXT8 1623 aaKnown RBP22.49■■□□□ 1.19
SMURF1-203ENST00000472627 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
SMURF1-203ENST00000472627 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
SMURF1-203ENST00000472627 ALKQ9UM73 1620 aa22.45■■□□□ 1.18
SMURF1-203ENST00000472627 LRRC7Q96NW7 1537 aa22.44■■□□□ 1.18
SMURF1-203ENST00000472627 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
SMURF1-203ENST00000472627 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
SMURF1-203ENST00000472627 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
SMURF1-203ENST00000472627 ZC3H13Q5T200 1668 aaKnown RBP22.39■■□□□ 1.17
SMURF1-203ENST00000472627 ARHGEF5Q12774 1597 aa22.34■■□□□ 1.17
SMURF1-203ENST00000472627 ABCC3O15438 1527 aa22.34■■□□□ 1.17
SMURF1-203ENST00000472627 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
SMURF1-203ENST00000472627 NCOA2Q15596 1464 aa22.34■■□□□ 1.17
SMURF1-203ENST00000472627 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
SMURF1-203ENST00000472627 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.17
SMURF1-203ENST00000472627 EID1Q9Y6B2 187 aa22.3■■□□□ 1.16
SMURF1-203ENST00000472627 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
SMURF1-203ENST00000472627 TXNDC2Q86VQ3 553 aa22.28■■□□□ 1.16
SMURF1-203ENST00000472627 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
SMURF1-203ENST00000472627 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
SMURF1-203ENST00000472627 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
SMURF1-203ENST00000472627 SLIT1O75093 1534 aa22.24■■□□□ 1.15
SMURF1-203ENST00000472627 MAST1Q9Y2H9 1570 aa22.24■■□□□ 1.15
SMURF1-203ENST00000472627 ARHGAP23Q9P227 1491 aa22.22■■□□□ 1.15
SMURF1-203ENST00000472627 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
SMURF1-203ENST00000472627 LTKP29376 864 aa22.2■■□□□ 1.14
SMURF1-203ENST00000472627 CEP152O94986 1710 aa22.18■■□□□ 1.14
SMURF1-203ENST00000472627 LRRC9Q6ZRR7 1453 aa22.18■■□□□ 1.14
SMURF1-203ENST00000472627 DUOX2Q9NRD8 1548 aa22.17■■□□□ 1.14
SMURF1-203ENST00000472627 ARHGAP31Q2M1Z3 1444 aa22.17■■□□□ 1.14
SMURF1-203ENST00000472627 POTEAQ6S8J7 498 aa22.17■■□□□ 1.14
SMURF1-203ENST00000472627 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
SMURF1-203ENST00000472627 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
SMURF1-203ENST00000472627 TMEM2Q9UHN6 1383 aa22.15■■□□□ 1.14
SMURF1-203ENST00000472627 XIRP1Q702N8 1843 aaKnown RBP22.15■■□□□ 1.14
SMURF1-203ENST00000472627 KCNA6P17658 529 aa22.13■■□□□ 1.13
SMURF1-203ENST00000472627 CFAP65Q6ZU64 1925 aaKnown RBP22.13■■□□□ 1.13
SMURF1-203ENST00000472627 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
SMURF1-203ENST00000472627 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
SMURF1-203ENST00000472627 KANK1Q14678 1352 aa22.12■■□□□ 1.13
SMURF1-203ENST00000472627 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
SMURF1-203ENST00000472627 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
SMURF1-203ENST00000472627 ERBINQ96RT1 1412 aa22.1■■□□□ 1.13
SMURF1-203ENST00000472627 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
SMURF1-203ENST00000472627 PIK3C2BO00750 1634 aa22.09■■□□□ 1.13
SMURF1-203ENST00000472627 MSH6P52701 1360 aa22.09■■□□□ 1.13
SMURF1-203ENST00000472627 KDM5AP29375 1690 aaKnown RBP22.08■■□□□ 1.13
SMURF1-203ENST00000472627 KIF15Q9NS87 1388 aa22.08■■□□□ 1.12
SMURF1-203ENST00000472627 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.12
SMURF1-203ENST00000472627 JCADQ9P266 1359 aa22.07■■□□□ 1.12
SMURF1-203ENST00000472627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.06■■□□□ 1.12
SMURF1-203ENST00000472627 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
SMURF1-203ENST00000472627 BCANQ96GW7 911 aa22.05■■□□□ 1.12
SMURF1-203ENST00000472627 SLC26A8Q96RN1 970 aa22.04■■□□□ 1.12
SMURF1-203ENST00000472627 PHLPP1O60346 1717 aa22.01■■□□□ 1.11
SMURF1-203ENST00000472627 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
SMURF1-203ENST00000472627 NWD1Q149M9 1564 aa22■■□□□ 1.11
SMURF1-203ENST00000472627 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
SMURF1-203ENST00000472627 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
SMURF1-203ENST00000472627 TET3O43151 1660 aa21.99■■□□□ 1.11
SMURF1-203ENST00000472627 IDI1Q13907 227 aa21.99■■□□□ 1.11
SMURF1-203ENST00000472627 MEX3CQ5U5Q3 659 aaKnown RBP21.99■■□□□ 1.11
SMURF1-203ENST00000472627 ZNF772Q68DY9 489 aaPredicted RBP21.99■■□□□ 1.11
SMURF1-203ENST00000472627 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
SMURF1-203ENST00000472627 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
SMURF1-203ENST00000472627 ADGRB3O60242 1522 aa21.97■■□□□ 1.11
SMURF1-203ENST00000472627 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
SMURF1-203ENST00000472627 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
SMURF1-203ENST00000472627 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
SMURF1-203ENST00000472627 SLC52A1Q9NWF4 448 aa21.96■■□□□ 1.11
SMURF1-203ENST00000472627 FGD6Q6ZV73 1430 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms