RNA–Protein interactions for RNA: ENST00000472107.5

COPS6-207, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 835 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-207ENST00000472107 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
COPS6-207ENST00000472107 FBXO31Q5XUX0 539 aaPredicted RBP29.37■■■□□ 2.29
COPS6-207ENST00000472107 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
COPS6-207ENST00000472107 ANKLE2Q86XL3 938 aa29.36■■■□□ 2.29
COPS6-207ENST00000472107 DHX29Q7Z478 1369 aaKnown RBP29.36■■■□□ 2.29
COPS6-207ENST00000472107 KIF3BO15066 747 aa29.35■■■□□ 2.29
COPS6-207ENST00000472107 RTEL1-TNFRSF6BF6WH68 1400 aa29.34■■■□□ 2.29
COPS6-207ENST00000472107 POLR1AO95602 1720 aaPredicted RBP29.33■■■□□ 2.29
COPS6-207ENST00000472107 NEURL4Q96JN8 1562 aa29.31■■■□□ 2.28
COPS6-207ENST00000472107 WASHC2CQ9Y4E1 1318 aa29.31■■■□□ 2.28
COPS6-207ENST00000472107 THEMISQ8N1K5 641 aaPredicted RBP29.31■■■□□ 2.28
COPS6-207ENST00000472107 MBD5Q9P267 1494 aa29.3■■■□□ 2.28
COPS6-207ENST00000472107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.3■■■□□ 2.28
COPS6-207ENST00000472107 PZPP20742 1482 aa29.29■■■□□ 2.28
COPS6-207ENST00000472107 KDM5DQ9BY66 1539 aa29.26■■■□□ 2.27
COPS6-207ENST00000472107 TIAM1Q13009 1591 aa29.26■■■□□ 2.27
COPS6-207ENST00000472107 NPHP4O75161 1426 aaPredicted RBP29.23■■■□□ 2.27
COPS6-207ENST00000472107 MIA2Q96PC5 1412 aa29.23■■■□□ 2.27
COPS6-207ENST00000472107 FAM135AQ9P2D6 1515 aa29.22■■■□□ 2.27
COPS6-207ENST00000472107 NLRP1Q9C000 1473 aa29.22■■■□□ 2.27
COPS6-207ENST00000472107 VWDEQ8N2E2 1590 aa29.22■■■□□ 2.27
COPS6-207ENST00000472107 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
COPS6-207ENST00000472107 UGGT1Q9NYU2 1555 aa29.2■■■□□ 2.26
COPS6-207ENST00000472107 EHBP1L1Q8N3D4 1523 aa29.2■■■□□ 2.26
COPS6-207ENST00000472107 CCDC141Q6ZP82 1450 aa29.18■■■□□ 2.26
COPS6-207ENST00000472107 RSPH4AQ5TD94 716 aa29.18■■■□□ 2.26
COPS6-207ENST00000472107 MED14O60244 1454 aa29.17■■■□□ 2.26
COPS6-207ENST00000472107 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
COPS6-207ENST00000472107 DEPDC5O75140 1603 aa29.15■■■□□ 2.26
COPS6-207ENST00000472107 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
COPS6-207ENST00000472107 TSPY4P0CV99 314 aa29.11■■■□□ 2.25
COPS6-207ENST00000472107 TSPY10P0CW01 314 aa29.11■■■□□ 2.25
COPS6-207ENST00000472107 CAMSAP2Q08AD1 1489 aa29.1■■■□□ 2.25
COPS6-207ENST00000472107 IQGAP1P46940 1657 aa29.09■■■□□ 2.25
COPS6-207ENST00000472107 LRRC7Q96NW7 1537 aa29.07■■■□□ 2.24
COPS6-207ENST00000472107 NCOA2Q15596 1464 aa29.04■■■□□ 2.24
COPS6-207ENST00000472107 RNF17Q9BXT8 1623 aaKnown RBP29.03■■■□□ 2.24
COPS6-207ENST00000472107 SYNMO15061 1565 aa29.01■■■□□ 2.23
COPS6-207ENST00000472107 STRCP1A6NGW2 1772 aa28.98■■■□□ 2.23
COPS6-207ENST00000472107 ABCC3O15438 1527 aa28.97■■■□□ 2.23
COPS6-207ENST00000472107 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
COPS6-207ENST00000472107 ERVK-7P63135 1459 aa28.96■■■□□ 2.23
COPS6-207ENST00000472107 ZC3H13Q5T200 1668 aaKnown RBP28.93■■■□□ 2.22
COPS6-207ENST00000472107 SCAF11Q99590 1463 aaKnown RBP28.92■■■□□ 2.22
COPS6-207ENST00000472107 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
COPS6-207ENST00000472107 RGS17Q9UGC6 210 aaPredicted RBP28.92■■■□□ 2.22
COPS6-207ENST00000472107 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
COPS6-207ENST00000472107 LTKP29376 864 aa28.87■■■□□ 2.21
COPS6-207ENST00000472107 UBR1Q8IWV7 1749 aa28.85■■■□□ 2.21
COPS6-207ENST00000472107 EIF2AK4Q9P2K8 1649 aaKnown RBP28.84■■■□□ 2.21
COPS6-207ENST00000472107 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
COPS6-207ENST00000472107 CFAP65Q6ZU64 1925 aaKnown RBP28.82■■■□□ 2.2
COPS6-207ENST00000472107 SLIT1O75093 1534 aa28.8■■■□□ 2.2
COPS6-207ENST00000472107 ARHGAP23Q9P227 1491 aa28.8■■■□□ 2.2
COPS6-207ENST00000472107 FAM135BQ49AJ0 1406 aa28.8■■■□□ 2.2
COPS6-207ENST00000472107 STAG3Q9UJ98 1225 aa28.79■■■□□ 2.2
COPS6-207ENST00000472107 CEP152O94986 1710 aa28.78■■■□□ 2.2
COPS6-207ENST00000472107 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
COPS6-207ENST00000472107 POTEAQ6S8J7 498 aa28.76■■■□□ 2.19
COPS6-207ENST00000472107 TMEM94Q12767 1356 aa28.74■■■□□ 2.19
COPS6-207ENST00000472107 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
COPS6-207ENST00000472107 ARHGAP31Q2M1Z3 1444 aa28.73■■■□□ 2.19
COPS6-207ENST00000472107 XIRP1Q702N8 1843 aaKnown RBP28.73■■■□□ 2.19
COPS6-207ENST00000472107 LRRC9Q6ZRR7 1453 aa28.72■■■□□ 2.19
COPS6-207ENST00000472107 TMEM2Q9UHN6 1383 aa28.72■■■□□ 2.19
COPS6-207ENST00000472107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.71■■■□□ 2.198e-9■■■■■ 28
COPS6-207ENST00000472107 PROSER2Q86WR7 435 aaPredicted RBP28.7■■■□□ 2.18
COPS6-207ENST00000472107 MYOM3Q5VTT5 1437 aa28.69■■■□□ 2.18
COPS6-207ENST00000472107 KCNA6P17658 529 aa28.69■■■□□ 2.18
COPS6-207ENST00000472107 KIF15Q9NS87 1388 aa28.67■■■□□ 2.18
COPS6-207ENST00000472107 RRP7BPQ9NSQ0 103 aa28.66■■■□□ 2.18
COPS6-207ENST00000472107 PRDM15P57071 1507 aaPredicted RBP28.65■■■□□ 2.18
COPS6-207ENST00000472107 RBM33Q96EV2 1170 aaKnown RBP28.65■■■□□ 2.18
COPS6-207ENST00000472107 SLC26A8Q96RN1 970 aa28.65■■■□□ 2.18
COPS6-207ENST00000472107 PIK3C2BO00750 1634 aa28.65■■■□□ 2.18
COPS6-207ENST00000472107 KANK1Q14678 1352 aa28.64■■■□□ 2.18
COPS6-207ENST00000472107 ERBINQ96RT1 1412 aa28.63■■■□□ 2.17
COPS6-207ENST00000472107 ROBO1Q9Y6N7 1651 aa28.63■■■□□ 2.17
COPS6-207ENST00000472107 EFCAB6Q5THR3 1501 aa28.62■■■□□ 2.17
COPS6-207ENST00000472107 IDI1Q13907 227 aa28.61■■■□□ 2.17
COPS6-207ENST00000472107 KANK4Q5T7N3 995 aaPredicted RBP28.61■■■□□ 2.17
COPS6-207ENST00000472107 BCANQ96GW7 911 aa28.61■■■□□ 2.17
COPS6-207ENST00000472107 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
COPS6-207ENST00000472107 MSH6P52701 1360 aa28.58■■■□□ 2.17
COPS6-207ENST00000472107 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
COPS6-207ENST00000472107 SLAIN2Q9P270 581 aa28.55■■■□□ 2.16
COPS6-207ENST00000472107 NKTRP30414 1462 aaKnown RBP28.53■■■□□ 2.16
COPS6-207ENST00000472107 JCADQ9P266 1359 aa28.53■■■□□ 2.16
COPS6-207ENST00000472107 TET3O43151 1660 aa28.53■■■□□ 2.16
COPS6-207ENST00000472107 KDM5AP29375 1690 aaKnown RBP28.53■■■□□ 2.16
COPS6-207ENST00000472107 ABCC5O15440 1437 aa28.52■■■□□ 2.16
COPS6-207ENST00000472107 PHLPP1O60346 1717 aa28.47■■■□□ 2.15
COPS6-207ENST00000472107 SLC52A1Q9NWF4 448 aa28.47■■■□□ 2.15
COPS6-207ENST00000472107 LMTK2Q8IWU2 1503 aa28.47■■■□□ 2.15
COPS6-207ENST00000472107 SETD1AO15047 1707 aaKnown RBP28.46■■■□□ 2.15
COPS6-207ENST00000472107 NWD1Q149M9 1564 aa28.46■■■□□ 2.15
COPS6-207ENST00000472107 CROCC2H7BZ55 1655 aa28.45■■■□□ 2.15
COPS6-207ENST00000472107 MEX3CQ5U5Q3 659 aaKnown RBP28.45■■■□□ 2.14
COPS6-207ENST00000472107 DAPK1P53355 1430 aa28.44■■■□□ 2.14
COPS6-207ENST00000472107 ADGRB3O60242 1522 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms