RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NLRP13Q86W25 1043 aa10.36□□□□□ -0.75
TPM3-215ENST00000469717 ABCC5O15440 1437 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 DAPK1P53355 1430 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 PZPP20742 1482 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 RALBP1Q15311 655 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 PANK2Q9BZ23 570 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
TPM3-215ENST00000469717 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
TPM3-215ENST00000469717 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
TPM3-215ENST00000469717 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
TPM3-215ENST00000469717 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
TPM3-215ENST00000469717 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
TPM3-215ENST00000469717 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
TPM3-215ENST00000469717 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
TPM3-215ENST00000469717 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
TPM3-215ENST00000469717 PDE3BQ13370 1112 aa10.33□□□□□ -0.76
TPM3-215ENST00000469717 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
TPM3-215ENST00000469717 THOC2Q8NI27 1593 aaKnown RBP10.33□□□□□ -0.76
TPM3-215ENST00000469717 USP19O94966 1318 aa10.33□□□□□ -0.76
TPM3-215ENST00000469717 ABCA10Q8WWZ4 1543 aa10.33□□□□□ -0.76
TPM3-215ENST00000469717 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
TPM3-215ENST00000469717 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
TPM3-215ENST00000469717 ROCK2O75116 1388 aaKnown RBP10.31□□□□□ -0.76
TPM3-215ENST00000469717 EPRSP07814 1512 aaKnown RBP10.31□□□□□ -0.76
TPM3-215ENST00000469717 PARD3Q8TEW0 1356 aa10.3□□□□□ -0.76
TPM3-215ENST00000469717 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
TPM3-215ENST00000469717 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
TPM3-215ENST00000469717 PLEKHH1Q9ULM0 1364 aa10.3□□□□□ -0.76
TPM3-215ENST00000469717 IGHDP01880 384 aa10.3□□□□□ -0.76
TPM3-215ENST00000469717 CFDP1Q9UEE9 299 aaPredicted RBP10.3□□□□□ -0.76
TPM3-215ENST00000469717 KIF14Q15058 1648 aa10.3□□□□□ -0.76
TPM3-215ENST00000469717 TSPY4P0CV99 314 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 TSPY10P0CW01 314 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 XRCC6P12956 609 aaKnown RBP eCLIP10.29□□□□□ -0.769e-13■□□□□ 8.6
TPM3-215ENST00000469717 DUSP27Q5VZP5 1158 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 KIAA1107Q9UPP5 1409 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 CUL7Q14999 1698 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 BCAR3O75815 825 aa10.29□□□□□ -0.76
TPM3-215ENST00000469717 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
TPM3-215ENST00000469717 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
TPM3-215ENST00000469717 OSCARQ8IYS5 282 aa10.27□□□□□ -0.76
TPM3-215ENST00000469717 PANK3Q9H999 370 aa10.27□□□□□ -0.76
TPM3-215ENST00000469717 ROCK1Q13464 1354 aa10.27□□□□□ -0.77
TPM3-215ENST00000469717 CCDC146Q8IYE0 955 aa10.27□□□□□ -0.77
TPM3-215ENST00000469717 RALGAPBQ86X10 1494 aa10.27□□□□□ -0.77
TPM3-215ENST00000469717 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
TPM3-215ENST00000469717 MLECQ14165 292 aa10.26□□□□□ -0.77
TPM3-215ENST00000469717 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
TPM3-215ENST00000469717 KIAA0586Q9BVV6 1533 aa10.25□□□□□ -0.77
TPM3-215ENST00000469717 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
TPM3-215ENST00000469717 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
TPM3-215ENST00000469717 DISP3Q9P2K9 1392 aa10.25□□□□□ -0.77
TPM3-215ENST00000469717 PDE4CQ08493 712 aa10.25□□□□□ -0.77
TPM3-215ENST00000469717 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
TPM3-215ENST00000469717 BLMP54132 1417 aaPredicted RBP10.25□□□□□ -0.77
TPM3-215ENST00000469717 GAPVD1Q14C86 1478 aa10.24□□□□□ -0.77
TPM3-215ENST00000469717 E9PCH4 1651 aa10.24□□□□□ -0.77
TPM3-215ENST00000469717 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
TPM3-215ENST00000469717 DMRT2Q9Y5R5 561 aa10.24□□□□□ -0.77
TPM3-215ENST00000469717 NUP155O75694 1391 aa10.24□□□□□ -0.77
TPM3-215ENST00000469717 PDIA4P13667 645 aaKnown RBP10.23□□□□□ -0.77
TPM3-215ENST00000469717 GLIPR1L2Q4G1C9 344 aa10.23□□□□□ -0.77
TPM3-215ENST00000469717 ERBB4Q15303 1308 aa10.23□□□□□ -0.77
TPM3-215ENST00000469717 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
TPM3-215ENST00000469717 ZNF608Q9ULD9 1512 aaPredicted RBP10.22□□□□□ -0.77
TPM3-215ENST00000469717 PANK1Q8TE04 598 aa10.22□□□□□ -0.77
TPM3-215ENST00000469717 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
TPM3-215ENST00000469717 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
TPM3-215ENST00000469717 HSP90AA1P07900 732 aaKnown RBP10.22□□□□□ -0.77
TPM3-215ENST00000469717 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
TPM3-215ENST00000469717 GOLGA6L3A6NEY3 463 aa10.21□□□□□ -0.77
TPM3-215ENST00000469717 GOLGA2Q08379 1002 aa10.21□□□□□ -0.77
TPM3-215ENST00000469717 L1TD1Q5T7N2 865 aaKnown RBP10.21□□□□□ -0.77
TPM3-215ENST00000469717 LAMC3Q9Y6N6 1575 aa10.21□□□□□ -0.77
TPM3-215ENST00000469717 TNNQ9UQP3 1299 aa10.21□□□□□ -0.78
TPM3-215ENST00000469717 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.78
TPM3-215ENST00000469717 CAMSAP2Q08AD1 1489 aa10.2□□□□□ -0.78
TPM3-215ENST00000469717 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
TPM3-215ENST00000469717 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
TPM3-215ENST00000469717 CLCN1P35523 988 aa10.2□□□□□ -0.78
TPM3-215ENST00000469717 WDR43Q15061 677 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM3-215ENST00000469717 BECN1Q14457 450 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 TESK2Q96S53 571 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 WDR62O43379 1518 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 APAF1O14727 1248 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 ANKRD50Q9ULJ7 1429 aa10.19□□□□□ -0.78
TPM3-215ENST00000469717 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
TPM3-215ENST00000469717 SLFN5Q08AF3 891 aa10.18□□□□□ -0.78
TPM3-215ENST00000469717 ZNF521Q96K83 1311 aa10.18□□□□□ -0.78
TPM3-215ENST00000469717 PPP2R1AP30153 589 aa10.18□□□□□ -0.78
TPM3-215ENST00000469717 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.18□□□□□ -0.78
TPM3-215ENST00000469717 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
TPM3-215ENST00000469717 MCM4P33991 863 aa10.17□□□□□ -0.78
TPM3-215ENST00000469717 BCL2L13Q9BXK5 485 aa10.17□□□□□ -0.78
TPM3-215ENST00000469717 TRAK2O60296 914 aa10.16□□□□□ -0.78
TPM3-215ENST00000469717 RRP9O43818 475 aaKnown RBP10.16□□□□□ -0.78
TPM3-215ENST00000469717 CARMIL2Q6F5E8 1435 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms