RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 WASHC2CQ9Y4E1 1318 aa41.25■■■■■ 4.19
SNX5-206ENST00000469704 DUOX2Q9NRD8 1548 aa41.23■■■■■ 4.19
SNX5-206ENST00000469704 EIF2AK4Q9P2K8 1649 aaKnown RBP41.23■■■■■ 4.19
SNX5-206ENST00000469704 KDM5DQ9BY66 1539 aa41.23■■■■■ 4.19
SNX5-206ENST00000469704 RNF17Q9BXT8 1623 aaKnown RBP41.18■■■■■ 4.18
SNX5-206ENST00000469704 KIF15Q9NS87 1388 aa41.18■■■■■ 4.18
SNX5-206ENST00000469704 DMRT2Q9Y5R5 561 aa41.17■■■■■ 4.18
SNX5-206ENST00000469704 RRP7BPQ9NSQ0 103 aa41.16■■■■■ 4.18
SNX5-206ENST00000469704 FAM50AQ14320 339 aaKnown RBP41.13■■■■■ 4.17
SNX5-206ENST00000469704 STRCQ7RTU9 1775 aa41.12■■■■■ 4.17
SNX5-206ENST00000469704 ANKRD30AQ9BXX3 1397 aa41.12■■■■■ 4.17
SNX5-206ENST00000469704 ERBINQ96RT1 1412 aa41.11■■■■■ 4.17
SNX5-206ENST00000469704 PZPP20742 1482 aa41.1■■■■■ 4.17
SNX5-206ENST00000469704 CHIC2Q9UKJ5 165 aa41.09■■■■■ 4.17
SNX5-206ENST00000469704 NCOA1Q15788 1441 aa41.06■■■■■ 4.16
SNX5-206ENST00000469704 ZC3H13Q5T200 1668 aaKnown RBP41.05■■■■■ 4.16
SNX5-206ENST00000469704 MYO3AQ8NEV4 1616 aa41.05■■■■■ 4.16
SNX5-206ENST00000469704 FBXO31Q5XUX0 539 aaPredicted RBP41.05■■■■■ 4.16
SNX5-206ENST00000469704 ZNF142P52746 1687 aaPredicted RBP41.04■■■■■ 4.16
SNX5-206ENST00000469704 MROH1Q8NDA8 1641 aa41.03■■■■■ 4.16
SNX5-206ENST00000469704 ABCC3O15438 1527 aa41.03■■■■■ 4.16
SNX5-206ENST00000469704 ADGRL2O95490 1459 aa41.01■■■■■ 4.16
SNX5-206ENST00000469704 CEP170BQ9Y4F5 1589 aaPredicted RBP41■■■■■ 4.15
SNX5-206ENST00000469704 TNRQ92752 1358 aa40.99■■■■■ 4.15
SNX5-206ENST00000469704 CAMSAP1Q5T5Y3 1602 aa40.97■■■■■ 4.15
SNX5-206ENST00000469704 PTPRTO14522 1441 aa40.97■■■■■ 4.15
SNX5-206ENST00000469704 ILDR1Q86SU0 546 aaPredicted RBP40.97■■■■■ 4.15
SNX5-206ENST00000469704 A2ML1A8K2U0 1454 aa40.96■■■■■ 4.15
SNX5-206ENST00000469704 PRDM15P57071 1507 aaPredicted RBP40.93■■■■■ 4.14
SNX5-206ENST00000469704 PPARGC1BQ86YN6 1023 aaKnown RBP40.92■■■■■ 4.14
SNX5-206ENST00000469704 DEPDC5O75140 1603 aa40.91■■■■■ 4.14
SNX5-206ENST00000469704 PLA2R1Q13018 1463 aa40.9■■■■■ 4.14
SNX5-206ENST00000469704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.89■■■■■ 4.14
SNX5-206ENST00000469704 KANK1Q14678 1352 aa40.88■■■■■ 4.14
SNX5-206ENST00000469704 CEP152O94986 1710 aa40.88■■■■■ 4.13
SNX5-206ENST00000469704 PKD2Q13563 968 aa40.88■■■■■ 4.13
SNX5-206ENST00000469704 NLRP1Q9C000 1473 aa40.87■■■■■ 4.13
SNX5-206ENST00000469704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.86■■■■■ 4.132e-10■□□□□ 9.7
SNX5-206ENST00000469704 ARHGAP31Q2M1Z3 1444 aa40.84■■■■■ 4.13
SNX5-206ENST00000469704 SPATA31D1Q6ZQQ2 1576 aa40.83■■■■■ 4.13
SNX5-206ENST00000469704 FBXO41Q8TF61 875 aa40.82■■■■■ 4.13
SNX5-206ENST00000469704 NCKAP5LQ9HCH0 1330 aa40.82■■■■■ 4.13
SNX5-206ENST00000469704 ANKRD50Q9ULJ7 1429 aa40.81■■■■■ 4.12
SNX5-206ENST00000469704 THEMISQ8N1K5 641 aaPredicted RBP40.8■■■■■ 4.12
SNX5-206ENST00000469704 ERVK-7P63135 1459 aa40.79■■■■■ 4.12
SNX5-206ENST00000469704 CFAP65Q6ZU64 1925 aaKnown RBP40.79■■■■■ 4.12
SNX5-206ENST00000469704 ROCK1Q13464 1354 aa40.78■■■■■ 4.12
SNX5-206ENST00000469704 CERKQ8TCT0 537 aa40.78■■■■■ 4.12
SNX5-206ENST00000469704 VWDEQ8N2E2 1590 aa40.76■■■■■ 4.12
SNX5-206ENST00000469704 LMTK2Q8IWU2 1503 aa40.75■■■■■ 4.11
SNX5-206ENST00000469704 UGGT1Q9NYU2 1555 aa40.72■■■■■ 4.11
SNX5-206ENST00000469704 ANKLE2Q86XL3 938 aa40.66■■■■■ 4.1
SNX5-206ENST00000469704 ITGAEP38570 1179 aa40.65■■■■■ 4.1
SNX5-206ENST00000469704 RRBP1Q9P2E9 1410 aaKnown RBP40.65■■■■■ 4.1
SNX5-206ENST00000469704 POLR1AO95602 1720 aaPredicted RBP40.6■■■■■ 4.09
SNX5-206ENST00000469704 EFCAB6Q5THR3 1501 aa40.57■■■■■ 4.08
SNX5-206ENST00000469704 LTBP4Q8N2S1 1624 aa40.56■■■■■ 4.08
SNX5-206ENST00000469704 UBR1Q8IWV7 1749 aa40.53■■■■■ 4.08
SNX5-206ENST00000469704 UNC13BO14795 1591 aa40.52■■■■■ 4.08
SNX5-206ENST00000469704 NEURL4Q96JN8 1562 aa40.52■■■■■ 4.08
SNX5-206ENST00000469704 MED14O60244 1454 aa40.51■■■■■ 4.07
SNX5-206ENST00000469704 RPRD2Q5VT52 1461 aaKnown RBP40.51■■■■■ 4.07
SNX5-206ENST00000469704 NOS1P29475 1434 aa40.5■■■■■ 4.07
SNX5-206ENST00000469704 ZNF335Q9H4Z2 1342 aaPredicted RBP40.47■■■■■ 4.07
SNX5-206ENST00000469704 TET3O43151 1660 aa40.47■■■■■ 4.07
SNX5-206ENST00000469704 IDI1Q13907 227 aa40.45■■■■■ 4.07
SNX5-206ENST00000469704 SLC52A1Q9NWF4 448 aa40.45■■■■■ 4.07
SNX5-206ENST00000469704 NPHP4O75161 1426 aaPredicted RBP40.43■■■■■ 4.06
SNX5-206ENST00000469704 IQSEC2Q5JU85 1478 aa40.43■■■■■ 4.06
SNX5-206ENST00000469704 GCC2Q8IWJ2 1684 aa40.42■■■■■ 4.06
SNX5-206ENST00000469704 PIK3C2BO00750 1634 aa40.42■■■■■ 4.06
SNX5-206ENST00000469704 KDM5AP29375 1690 aaKnown RBP40.41■■■■■ 4.06
SNX5-206ENST00000469704 SYNMO15061 1565 aa40.41■■■■■ 4.06
SNX5-206ENST00000469704 STAG3Q9UJ98 1225 aa40.41■■■■■ 4.06
SNX5-206ENST00000469704 SLIT1O75093 1534 aa40.4■■■■■ 4.06
SNX5-206ENST00000469704 ARHGAP23Q9P227 1491 aa40.39■■■■■ 4.06
SNX5-206ENST00000469704 IQGAP3Q86VI3 1631 aa40.38■■■■■ 4.06
SNX5-206ENST00000469704 NUP155O75694 1391 aa40.38■■■■■ 4.06
SNX5-206ENST00000469704 EID1Q9Y6B2 187 aa40.35■■■■■ 4.05
SNX5-206ENST00000469704 TXNDC2Q86VQ3 553 aa40.34■■■■■ 4.05
SNX5-206ENST00000469704 IQGAP1P46940 1657 aa40.34■■■■■ 4.05
SNX5-206ENST00000469704 LTKP29376 864 aa40.33■■■■■ 4.05
SNX5-206ENST00000469704 TMEM2Q9UHN6 1383 aa40.33■■■■■ 4.05
SNX5-206ENST00000469704 SCAF11Q99590 1463 aaKnown RBP40.32■■■■■ 4.05
SNX5-206ENST00000469704 NAIPQ13075 1403 aa40.29■■■■■ 4.04
SNX5-206ENST00000469704 E9PCH4 1651 aa40.28■■■■■ 4.04
SNX5-206ENST00000469704 ADGRB3O60242 1522 aa40.24■■■■■ 4.03
SNX5-206ENST00000469704 CPS1P31327 1500 aa40.24■■■■■ 4.03
SNX5-206ENST00000469704 HFM1A2PYH4 1435 aa40.2■■■■■ 4.03
SNX5-206ENST00000469704 HDGFP51858 240 aaKnown RBP40.14■■■■■ 4.02
SNX5-206ENST00000469704 TMEM131LA2VDJ0 1609 aa40.11■■■■■ 4.01
SNX5-206ENST00000469704 MYO5BQ9ULV0 1848 aa40.07■■■■■ 4.01
SNX5-206ENST00000469704 UBAP1LF5GYI3 381 aa40.06■■■■■ 4
SNX5-206ENST00000469704 CHGAP10645 457 aaKnown RBP40.04■■■■■ 4
SNX5-206ENST00000469704 ZFYVE9O95405 1425 aa40.04■■■■■ 4
SNX5-206ENST00000469704 STRCP1A6NGW2 1772 aa40.03■■■■■ 4
SNX5-206ENST00000469704 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.02■■■■■ 4
SNX5-206ENST00000469704 TRIM52Q96A61 297 aa40.02■■■■■ 4
SNX5-206ENST00000469704 RIMS2Q9UQ26 1411 aa40.01■■■■■ 4
SNX5-206ENST00000469704 SPHKAPQ2M3C7 1700 aa40.01■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms