RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
EDEM3-204ENST00000466392 ZMYM3Q14202 1370 aa18.22■□□□□ 0.51
EDEM3-204ENST00000466392 HSPA2P54652 639 aa18.22■□□□□ 0.51
EDEM3-204ENST00000466392 CEP152O94986 1710 aa18.21■□□□□ 0.51
EDEM3-204ENST00000466392 KDM5DQ9BY66 1539 aa18.21■□□□□ 0.51
EDEM3-204ENST00000466392 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
EDEM3-204ENST00000466392 SETD1BQ9UPS6 1966 aaKnown RBP18.18■□□□□ 0.5
EDEM3-204ENST00000466392 ADGRL2O95490 1459 aa18.17■□□□□ 0.5
EDEM3-204ENST00000466392 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
EDEM3-204ENST00000466392 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
EDEM3-204ENST00000466392 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
EDEM3-204ENST00000466392 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
EDEM3-204ENST00000466392 ITGAEP38570 1179 aa18.16■□□□□ 0.5
EDEM3-204ENST00000466392 ZC3H13Q5T200 1668 aaKnown RBP18.15■□□□□ 0.5
EDEM3-204ENST00000466392 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
EDEM3-204ENST00000466392 ABCC3O15438 1527 aa18.15■□□□□ 0.5
EDEM3-204ENST00000466392 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
EDEM3-204ENST00000466392 DEPDC5O75140 1603 aa18.14■□□□□ 0.49
EDEM3-204ENST00000466392 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
EDEM3-204ENST00000466392 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
EDEM3-204ENST00000466392 NPATQ14207 1427 aa18.13■□□□□ 0.49
EDEM3-204ENST00000466392 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
EDEM3-204ENST00000466392 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
EDEM3-204ENST00000466392 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
EDEM3-204ENST00000466392 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
EDEM3-204ENST00000466392 STRCQ7RTU9 1775 aa18.1■□□□□ 0.49
EDEM3-204ENST00000466392 ZNF142P52746 1687 aaPredicted RBP18.1■□□□□ 0.49
EDEM3-204ENST00000466392 PZPP20742 1482 aa18.1■□□□□ 0.49
EDEM3-204ENST00000466392 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
EDEM3-204ENST00000466392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
EDEM3-204ENST00000466392 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
EDEM3-204ENST00000466392 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
EDEM3-204ENST00000466392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
EDEM3-204ENST00000466392 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
EDEM3-204ENST00000466392 TNRQ92752 1358 aa18.04■□□□□ 0.48
EDEM3-204ENST00000466392 SPATA31D1Q6ZQQ2 1576 aa18.03■□□□□ 0.48
EDEM3-204ENST00000466392 ROCK1Q13464 1354 aa18.03■□□□□ 0.48
EDEM3-204ENST00000466392 UNC13BO14795 1591 aa18.02■□□□□ 0.48
EDEM3-204ENST00000466392 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
EDEM3-204ENST00000466392 KANK1Q14678 1352 aa18.01■□□□□ 0.47
EDEM3-204ENST00000466392 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
EDEM3-204ENST00000466392 EFCAB6Q5THR3 1501 aa17.98■□□□□ 0.47
EDEM3-204ENST00000466392 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
EDEM3-204ENST00000466392 GCC2Q8IWJ2 1684 aa17.98■□□□□ 0.47
EDEM3-204ENST00000466392 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
EDEM3-204ENST00000466392 TET3O43151 1660 aa17.96■□□□□ 0.47
EDEM3-204ENST00000466392 UGGT1Q9NYU2 1555 aa17.95■□□□□ 0.46
EDEM3-204ENST00000466392 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
EDEM3-204ENST00000466392 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
EDEM3-204ENST00000466392 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
EDEM3-204ENST00000466392 SYNMO15061 1565 aa17.94■□□□□ 0.46
EDEM3-204ENST00000466392 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
EDEM3-204ENST00000466392 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
EDEM3-204ENST00000466392 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
EDEM3-204ENST00000466392 E9PCH4 1651 aa17.93■□□□□ 0.46
EDEM3-204ENST00000466392 NAIPQ13075 1403 aa17.92■□□□□ 0.46
EDEM3-204ENST00000466392 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
EDEM3-204ENST00000466392 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
EDEM3-204ENST00000466392 NUP155O75694 1391 aa17.89■□□□□ 0.45
EDEM3-204ENST00000466392 PTPRTO14522 1441 aa17.88■□□□□ 0.45
EDEM3-204ENST00000466392 NOS1P29475 1434 aa17.87■□□□□ 0.45
EDEM3-204ENST00000466392 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
EDEM3-204ENST00000466392 HFM1A2PYH4 1435 aa17.86■□□□□ 0.45
EDEM3-204ENST00000466392 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
EDEM3-204ENST00000466392 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
EDEM3-204ENST00000466392 THEMISQ8N1K5 641 aaPredicted RBP17.84■□□□□ 0.45
EDEM3-204ENST00000466392 PKD2Q13563 968 aa17.83■□□□□ 0.44
EDEM3-204ENST00000466392 IDI1Q13907 227 aa17.83■□□□□ 0.44
EDEM3-204ENST00000466392 ADGRB3O60242 1522 aa17.81■□□□□ 0.44
EDEM3-204ENST00000466392 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
EDEM3-204ENST00000466392 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
EDEM3-204ENST00000466392 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
EDEM3-204ENST00000466392 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
EDEM3-204ENST00000466392 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
EDEM3-204ENST00000466392 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
EDEM3-204ENST00000466392 SLIT1O75093 1534 aa17.78■□□□□ 0.44
EDEM3-204ENST00000466392 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
EDEM3-204ENST00000466392 ILDR1Q86SU0 546 aaPredicted RBP17.78■□□□□ 0.44
EDEM3-204ENST00000466392 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
EDEM3-204ENST00000466392 TMEM131LA2VDJ0 1609 aa17.77■□□□□ 0.44
EDEM3-204ENST00000466392 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
EDEM3-204ENST00000466392 NPHP4O75161 1426 aaPredicted RBP17.77■□□□□ 0.44
EDEM3-204ENST00000466392 LTKP29376 864 aa17.76■□□□□ 0.43
EDEM3-204ENST00000466392 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
EDEM3-204ENST00000466392 MED14O60244 1454 aa17.75■□□□□ 0.43
EDEM3-204ENST00000466392 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
EDEM3-204ENST00000466392 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
EDEM3-204ENST00000466392 TXNDC2Q86VQ3 553 aa17.73■□□□□ 0.43
EDEM3-204ENST00000466392 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
EDEM3-204ENST00000466392 SLC52A1Q9NWF4 448 aa17.73■□□□□ 0.43
EDEM3-204ENST00000466392 STRCP1A6NGW2 1772 aa17.73■□□□□ 0.43
EDEM3-204ENST00000466392 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
EDEM3-204ENST00000466392 CHGAP10645 457 aaKnown RBP17.72■□□□□ 0.43
EDEM3-204ENST00000466392 TRPM2O94759 1503 aa17.68■□□□□ 0.42
EDEM3-204ENST00000466392 FOXD1Q16676 465 aa17.68■□□□□ 0.42
EDEM3-204ENST00000466392 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
EDEM3-204ENST00000466392 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
EDEM3-204ENST00000466392 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
EDEM3-204ENST00000466392 EID1Q9Y6B2 187 aa17.68■□□□□ 0.42
EDEM3-204ENST00000466392 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms