RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 CLTCQ00610 1675 aaKnown RBP9.18□□□□□ -0.94
PRKCB-204ENST00000466124 SUPT6HQ7KZ85 1726 aaKnown RBP9.18□□□□□ -0.94
PRKCB-204ENST00000466124 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
PRKCB-204ENST00000466124 A2ML1A8K2U0 1454 aa9.16□□□□□ -0.94
PRKCB-204ENST00000466124 TOM1O60784 492 aa9.16□□□□□ -0.94
PRKCB-204ENST00000466124 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
PRKCB-204ENST00000466124 NEURL4Q96JN8 1562 aa9.16□□□□□ -0.94
PRKCB-204ENST00000466124 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
PRKCB-204ENST00000466124 CCDC18Q5T9S5 1454 aa9.15□□□□□ -0.94
PRKCB-204ENST00000466124 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
PRKCB-204ENST00000466124 APLP2Q06481 763 aa9.15□□□□□ -0.94
PRKCB-204ENST00000466124 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.94
PRKCB-204ENST00000466124 ALKQ9UM73 1620 aa9.15□□□□□ -0.94
PRKCB-204ENST00000466124 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
PRKCB-204ENST00000466124 ATP7AQ04656 1500 aa9.15□□□□□ -0.95
PRKCB-204ENST00000466124 A2MP01023 1474 aa9.15□□□□□ -0.95
PRKCB-204ENST00000466124 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.95
PRKCB-204ENST00000466124 POLR1AO95602 1720 aaPredicted RBP9.14□□□□□ -0.95
PRKCB-204ENST00000466124 SPAG9O60271 1321 aaKnown RBP9.14□□□□□ -0.95
PRKCB-204ENST00000466124 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
PRKCB-204ENST00000466124 KIAA1107Q9UPP5 1409 aa9.13□□□□□ -0.95
PRKCB-204ENST00000466124 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
PRKCB-204ENST00000466124 ZNF219Q9P2Y4 722 aaPredicted RBP9.12□□□□□ -0.95
PRKCB-204ENST00000466124 GPATCH8Q9UKJ3 1502 aaKnown RBP9.11□□□□□ -0.95
PRKCB-204ENST00000466124 PLEKHH2Q8IVE3 1493 aa9.11□□□□□ -0.95
PRKCB-204ENST00000466124 CAPN15O75808 1086 aa9.11□□□□□ -0.95
PRKCB-204ENST00000466124 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
PRKCB-204ENST00000466124 MED14O60244 1454 aa9.1□□□□□ -0.95
PRKCB-204ENST00000466124 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
PRKCB-204ENST00000466124 HNRNPMP52272 730 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRKCB-204ENST00000466124 GGT6Q6P531 493 aa9.1□□□□□ -0.95
PRKCB-204ENST00000466124 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
PRKCB-204ENST00000466124 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
PRKCB-204ENST00000466124 TNRQ92752 1358 aa9.09□□□□□ -0.95
PRKCB-204ENST00000466124 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
PRKCB-204ENST00000466124 PZPP20742 1482 aa9.08□□□□□ -0.96
PRKCB-204ENST00000466124 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
PRKCB-204ENST00000466124 NPHP4O75161 1426 aaPredicted RBP9.07□□□□□ -0.96
PRKCB-204ENST00000466124 RNF17Q9BXT8 1623 aaKnown RBP9.07□□□□□ -0.96
PRKCB-204ENST00000466124 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
PRKCB-204ENST00000466124 RGS17Q9UGC6 210 aaPredicted RBP9.07□□□□□ -0.96
PRKCB-204ENST00000466124 SYNMO15061 1565 aa9.07□□□□□ -0.96
PRKCB-204ENST00000466124 LRRC7Q96NW7 1537 aa9.06□□□□□ -0.96
PRKCB-204ENST00000466124 KDM5DQ9BY66 1539 aa9.06□□□□□ -0.96
PRKCB-204ENST00000466124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRKCB-204ENST00000466124 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
PRKCB-204ENST00000466124 RTEL1-TNFRSF6BF6WH68 1400 aa9.05□□□□□ -0.96
PRKCB-204ENST00000466124 STRCP1A6NGW2 1772 aa9.05□□□□□ -0.96
PRKCB-204ENST00000466124 IQGAP1P46940 1657 aa9.05□□□□□ -0.96
PRKCB-204ENST00000466124 DHX29Q7Z478 1369 aaKnown RBP9.05□□□□□ -0.96
PRKCB-204ENST00000466124 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
PRKCB-204ENST00000466124 CFDP1Q9UEE9 299 aaPredicted RBP9.05□□□□□ -0.96
PRKCB-204ENST00000466124 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
PRKCB-204ENST00000466124 UGGT1Q9NYU2 1555 aa9.04□□□□□ -0.96
PRKCB-204ENST00000466124 MBD5Q9P267 1494 aa9.04□□□□□ -0.96
PRKCB-204ENST00000466124 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
PRKCB-204ENST00000466124 CCNB3Q8WWL7 1395 aa9.03□□□□□ -0.96
PRKCB-204ENST00000466124 TIAM1Q13009 1591 aa9.01□□□□□ -0.97
PRKCB-204ENST00000466124 ZC3H13Q5T200 1668 aaKnown RBP9□□□□□ -0.97
PRKCB-204ENST00000466124 KIF3BO15066 747 aa9□□□□□ -0.97
PRKCB-204ENST00000466124 POLA2Q14181 598 aa9□□□□□ -0.97
PRKCB-204ENST00000466124 ZNF644Q9H582 1327 aaPredicted RBP9□□□□□ -0.97
PRKCB-204ENST00000466124 ABCB7O75027 752 aa8.99□□□□□ -0.97
PRKCB-204ENST00000466124 WASHC2CQ9Y4E1 1318 aa8.99□□□□□ -0.97
PRKCB-204ENST00000466124 FAM135BQ49AJ0 1406 aa8.98□□□□□ -0.97
PRKCB-204ENST00000466124 CCDC141Q6ZP82 1450 aa8.98□□□□□ -0.97
PRKCB-204ENST00000466124 POTEAQ6S8J7 498 aa8.98□□□□□ -0.97
PRKCB-204ENST00000466124 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
PRKCB-204ENST00000466124 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
PRKCB-204ENST00000466124 ERVK-7P63135 1459 aa8.96□□□□□ -0.97
PRKCB-204ENST00000466124 SCAF11Q99590 1463 aaKnown RBP8.96□□□□□ -0.97
PRKCB-204ENST00000466124 EHBP1L1Q8N3D4 1523 aa8.96□□□□□ -0.97
PRKCB-204ENST00000466124 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
PRKCB-204ENST00000466124 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.98
PRKCB-204ENST00000466124 ABCC3O15438 1527 aa8.95□□□□□ -0.98
PRKCB-204ENST00000466124 UBR1Q8IWV7 1749 aa8.95□□□□□ -0.98
PRKCB-204ENST00000466124 NCOA2Q15596 1464 aa8.95□□□□□ -0.98
PRKCB-204ENST00000466124 SLIT1O75093 1534 aa8.95□□□□□ -0.98
PRKCB-204ENST00000466124 SETD1AO15047 1707 aaKnown RBP8.94□□□□□ -0.98
PRKCB-204ENST00000466124 CACNB1Q02641 598 aaPredicted RBP8.94□□□□□ -0.98
PRKCB-204ENST00000466124 FKBP8Q14318 412 aa8.94□□□□□ -0.98
PRKCB-204ENST00000466124 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
PRKCB-204ENST00000466124 CAMSAP2Q08AD1 1489 aa8.94□□□□□ -0.98
PRKCB-204ENST00000466124 ARHGEF5Q12774 1597 aa8.93□□□□□ -0.98
PRKCB-204ENST00000466124 ROBO1Q9Y6N7 1651 aa8.92□□□□□ -0.98
PRKCB-204ENST00000466124 MAP3K1Q13233 1512 aa8.92□□□□□ -0.98
PRKCB-204ENST00000466124 LTKP29376 864 aa8.92□□□□□ -0.98
PRKCB-204ENST00000466124 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
PRKCB-204ENST00000466124 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
PRKCB-204ENST00000466124 EIF2AK4Q9P2K8 1649 aaKnown RBP8.91□□□□□ -0.98
PRKCB-204ENST00000466124 LRRC9Q6ZRR7 1453 aa8.91□□□□□ -0.98
PRKCB-204ENST00000466124 TMEM94Q12767 1356 aa8.91□□□□□ -0.98
PRKCB-204ENST00000466124 DSG3P32926 999 aa8.91□□□□□ -0.98
PRKCB-204ENST00000466124 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.98
PRKCB-204ENST00000466124 TXNDC2Q86VQ3 553 aa8.9□□□□□ -0.98
PRKCB-204ENST00000466124 ARHGAP31Q2M1Z3 1444 aa8.88□□□□□ -0.99
PRKCB-204ENST00000466124 CEP152O94986 1710 aa8.88□□□□□ -0.99
PRKCB-204ENST00000466124 JCADQ9P266 1359 aa8.88□□□□□ -0.99
PRKCB-204ENST00000466124 TSPY4P0CV99 314 aa8.88□□□□□ -0.99
PRKCB-204ENST00000466124 TSPY10P0CW01 314 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms