RNA–Protein interactions for RNA: ENST00000465900.5

SND1-204, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-204ENST00000465900 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
SND1-204ENST00000465900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.94
SND1-204ENST00000465900 FAM9AQ8IZU1 332 aaPredicted RBP9.19□□□□□ -0.94
SND1-204ENST00000465900 AFAP1Q8N556 730 aa9.19□□□□□ -0.94
SND1-204ENST00000465900 NUP153P49790 1475 aaKnown RBP9.19□□□□□ -0.94
SND1-204ENST00000465900 SETD1AO15047 1707 aaKnown RBP9.18□□□□□ -0.94
SND1-204ENST00000465900 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
SND1-204ENST00000465900 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
SND1-204ENST00000465900 PLA2R1Q13018 1463 aa9.16□□□□□ -0.94
SND1-204ENST00000465900 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.94
SND1-204ENST00000465900 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
SND1-204ENST00000465900 HRCP23327 699 aa9.15□□□□□ -0.94
SND1-204ENST00000465900 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
SND1-204ENST00000465900 PLCH2O75038 1416 aa9.14□□□□□ -0.95
SND1-204ENST00000465900 ZMYM3Q14202 1370 aa9.14□□□□□ -0.95
SND1-204ENST00000465900 NPATQ14207 1427 aa9.14□□□□□ -0.95
SND1-204ENST00000465900 DIP2CQ9Y2E4 1556 aa9.13□□□□□ -0.95
SND1-204ENST00000465900 CPS1P31327 1500 aa9.12□□□□□ -0.95
SND1-204ENST00000465900 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
SND1-204ENST00000465900 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
SND1-204ENST00000465900 RAPGEF6Q8TEU7 1601 aa9.12□□□□□ -0.95
SND1-204ENST00000465900 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
SND1-204ENST00000465900 CFAP74Q9C0B2 1584 aa9.12□□□□□ -0.95
SND1-204ENST00000465900 AGLP35573 1532 aa9.11□□□□□ -0.95
SND1-204ENST00000465900 NEURL4Q96JN8 1562 aa9.11□□□□□ -0.95
SND1-204ENST00000465900 KDM5CP41229 1560 aa9.1□□□□□ -0.95
SND1-204ENST00000465900 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
SND1-204ENST00000465900 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
SND1-204ENST00000465900 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
SND1-204ENST00000465900 CEP170BQ9Y4F5 1589 aaPredicted RBP9.08□□□□□ -0.96
SND1-204ENST00000465900 CNTLNQ9NXG0 1405 aa9.08□□□□□ -0.96
SND1-204ENST00000465900 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
SND1-204ENST00000465900 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
SND1-204ENST00000465900 LRRC7Q96NW7 1537 aa9.08□□□□□ -0.96
SND1-204ENST00000465900 HMGB1P09429 215 aaKnown RBP9.07□□□□□ -0.96
SND1-204ENST00000465900 PRXQ9BXM0 1461 aa9.07□□□□□ -0.96
SND1-204ENST00000465900 ZNF518AQ6AHZ1 1483 aa9.06□□□□□ -0.96
SND1-204ENST00000465900 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
SND1-204ENST00000465900 ZNF142P52746 1687 aaPredicted RBP9.06□□□□□ -0.96
SND1-204ENST00000465900 MYO3AQ8NEV4 1616 aa9.05□□□□□ -0.96
SND1-204ENST00000465900 STRCP1A6NGW2 1772 aa9.05□□□□□ -0.96
SND1-204ENST00000465900 NEFLP07196 543 aa9.05□□□□□ -0.96
SND1-204ENST00000465900 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
SND1-204ENST00000465900 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
SND1-204ENST00000465900 MYT1LQ9UL68 1186 aa9.04□□□□□ -0.96
SND1-204ENST00000465900 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
SND1-204ENST00000465900 CDK11BP21127 795 aaKnown RBP9.03□□□□□ -0.96
SND1-204ENST00000465900 CDK13Q14004 1512 aaKnown RBP9.03□□□□□ -0.96
SND1-204ENST00000465900 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.96
SND1-204ENST00000465900 LOC105371045A0A1W2PR82 267 aa9.02□□□□□ -0.97
SND1-204ENST00000465900 FBXO31Q5XUX0 539 aaPredicted RBP9.01□□□□□ -0.97
SND1-204ENST00000465900 MROH2AA6NES4 1674 aa9□□□□□ -0.97
SND1-204ENST00000465900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
SND1-204ENST00000465900 FAM135BQ49AJ0 1406 aa9□□□□□ -0.97
SND1-204ENST00000465900 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
SND1-204ENST00000465900 NPHP4O75161 1426 aaPredicted RBP8.99□□□□□ -0.97
SND1-204ENST00000465900 RGL2O15211 777 aa8.99□□□□□ -0.97
SND1-204ENST00000465900 PDE4CQ08493 712 aa8.99□□□□□ -0.97
SND1-204ENST00000465900 TAF7LQ5H9L4 462 aa8.99□□□□□ -0.97
SND1-204ENST00000465900 KIDINS220Q9ULH0 1771 aa8.99□□□□□ -0.97
SND1-204ENST00000465900 MED14O60244 1454 aa8.98□□□□□ -0.97
SND1-204ENST00000465900 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
SND1-204ENST00000465900 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
SND1-204ENST00000465900 SETBP1Q9Y6X0 1596 aa8.98□□□□□ -0.97
SND1-204ENST00000465900 POLA2Q14181 598 aa8.97□□□□□ -0.97
SND1-204ENST00000465900 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
SND1-204ENST00000465900 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
SND1-204ENST00000465900 LRP6O75581 1613 aa8.97□□□□□ -0.97
SND1-204ENST00000465900 KIF14Q15058 1648 aa8.97□□□□□ -0.97
SND1-204ENST00000465900 RNF17Q9BXT8 1623 aaKnown RBP8.97□□□□□ -0.97
SND1-204ENST00000465900 CLTCQ00610 1675 aaKnown RBP8.97□□□□□ -0.97
SND1-204ENST00000465900 GGT6Q6P531 493 aa8.96□□□□□ -0.98
SND1-204ENST00000465900 SUPT6HQ7KZ85 1726 aaKnown RBP8.96□□□□□ -0.98
SND1-204ENST00000465900 CHGAP10645 457 aaKnown RBP8.95□□□□□ -0.98
SND1-204ENST00000465900 SPOCK2Q92563 424 aa8.95□□□□□ -0.98
SND1-204ENST00000465900 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
SND1-204ENST00000465900 POLR1AO95602 1720 aaPredicted RBP8.94□□□□□ -0.98
SND1-204ENST00000465900 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
SND1-204ENST00000465900 ABCC1P33527 1531 aa8.94□□□□□ -0.98
SND1-204ENST00000465900 HSP90B1P14625 803 aaKnown RBP8.93□□□□□ -0.98
SND1-204ENST00000465900 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
SND1-204ENST00000465900 TNRQ92752 1358 aa8.93□□□□□ -0.98
SND1-204ENST00000465900 XIRP1Q702N8 1843 aaKnown RBP8.92□□□□□ -0.98
SND1-204ENST00000465900 MYO5CQ9NQX4 1742 aa8.92□□□□□ -0.98
SND1-204ENST00000465900 RXRBP28702 533 aa8.92□□□□□ -0.98
SND1-204ENST00000465900 THEMISQ8N1K5 641 aaPredicted RBP8.91□□□□□ -0.98
SND1-204ENST00000465900 SAMD9LQ8IVG5 1584 aa8.9□□□□□ -0.98
SND1-204ENST00000465900 PKNOX2Q96KN3 472 aa8.9□□□□□ -0.98
SND1-204ENST00000465900 DEPDC5O75140 1603 aa8.9□□□□□ -0.99
SND1-204ENST00000465900 PLXNC1O60486 1568 aa8.9□□□□□ -0.99
SND1-204ENST00000465900 JCADQ9P266 1359 aa8.89□□□□□ -0.99
SND1-204ENST00000465900 CDC42BPBQ9Y5S2 1711 aa8.89□□□□□ -0.99
SND1-204ENST00000465900 CENPBP07199 599 aaPredicted RBP8.89□□□□□ -0.99
SND1-204ENST00000465900 LTKP29376 864 aa8.89□□□□□ -0.99
SND1-204ENST00000465900 HNRNPMP52272 730 aaKnown RBP eCLIP8.89□□□□□ -0.999e-7■■■■□ 23.3
SND1-204ENST00000465900 ZNF772Q68DY9 489 aaPredicted RBP8.89□□□□□ -0.99
SND1-204ENST00000465900 SYNMO15061 1565 aa8.89□□□□□ -0.99
SND1-204ENST00000465900 RGS12O14924 1447 aa8.88□□□□□ -0.99
SND1-204ENST00000465900 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
SND1-204ENST00000465900 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms