RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 EFCAB5A4FU69 1503 aa8.66□□□□□ -1.02
UBP1-206ENST00000464787 ATP10BO94823 1461 aa8.66□□□□□ -1.02
UBP1-206ENST00000464787 FAM212AQ96EL1 285 aa8.66□□□□□ -1.02
UBP1-206ENST00000464787 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.02
UBP1-206ENST00000464787 EPRSP07814 1512 aaKnown RBP8.65□□□□□ -1.02
UBP1-206ENST00000464787 NUP153P49790 1475 aaKnown RBP8.65□□□□□ -1.02
UBP1-206ENST00000464787 DCAF8Q5TAQ9 597 aa8.65□□□□□ -1.02
UBP1-206ENST00000464787 SGIP1Q9BQI5 828 aa8.65□□□□□ -1.02
UBP1-206ENST00000464787 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
UBP1-206ENST00000464787 PYGBP11216 843 aa8.64□□□□□ -1.03
UBP1-206ENST00000464787 GLI2P10070 1586 aa8.64□□□□□ -1.03
UBP1-206ENST00000464787 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
UBP1-206ENST00000464787 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
UBP1-206ENST00000464787 IER5LQ5T953 404 aa8.62□□□□□ -1.03
UBP1-206ENST00000464787 MAP3K4Q9Y6R4 1608 aa8.62□□□□□ -1.03
UBP1-206ENST00000464787 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
UBP1-206ENST00000464787 LOC105371045A0A1W2PR82 267 aa8.6□□□□□ -1.03
UBP1-206ENST00000464787 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
UBP1-206ENST00000464787 CDK13Q14004 1512 aaKnown RBP8.59□□□□□ -1.03
UBP1-206ENST00000464787 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
UBP1-206ENST00000464787 PLCG2P16885 1265 aa8.59□□□□□ -1.03
UBP1-206ENST00000464787 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
UBP1-206ENST00000464787 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
UBP1-206ENST00000464787 CLIP1P30622 1438 aa8.58□□□□□ -1.04
UBP1-206ENST00000464787 FMN1Q68DA7 1419 aa8.58□□□□□ -1.04
UBP1-206ENST00000464787 IRX5P78411 483 aaPredicted RBP8.58□□□□□ -1.04
UBP1-206ENST00000464787 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
UBP1-206ENST00000464787 CD109Q6YHK3 1445 aa8.57□□□□□ -1.04
UBP1-206ENST00000464787 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
UBP1-206ENST00000464787 KDM6BO15054 1643 aa8.56□□□□□ -1.04
UBP1-206ENST00000464787 ST18O60284 1047 aa8.56□□□□□ -1.04
UBP1-206ENST00000464787 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
UBP1-206ENST00000464787 HECW1Q76N89 1606 aa8.55□□□□□ -1.04
UBP1-206ENST00000464787 ABCA9Q8IUA7 1624 aa8.55□□□□□ -1.04
UBP1-206ENST00000464787 PLEKHD1A6NEE1 506 aa8.55□□□□□ -1.04
UBP1-206ENST00000464787 STK25O00506 426 aa8.55□□□□□ -1.04
UBP1-206ENST00000464787 PCF11O94913 1555 aaKnown RBP8.55□□□□□ -1.04
UBP1-206ENST00000464787 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
UBP1-206ENST00000464787 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
UBP1-206ENST00000464787 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
UBP1-206ENST00000464787 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
UBP1-206ENST00000464787 TEX14Q8IWB6 1497 aa8.53□□□□□ -1.04
UBP1-206ENST00000464787 VGFO15240 615 aaPredicted RBP8.53□□□□□ -1.04
UBP1-206ENST00000464787 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
UBP1-206ENST00000464787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBP1-206ENST00000464787 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.04
UBP1-206ENST00000464787 OCEL1Q9H607 264 aa8.51□□□□□ -1.05
UBP1-206ENST00000464787 FYCO1Q9BQS8 1478 aa8.51□□□□□ -1.05
UBP1-206ENST00000464787 KIF14Q15058 1648 aa8.51□□□□□ -1.05
UBP1-206ENST00000464787 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
UBP1-206ENST00000464787 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
UBP1-206ENST00000464787 RAPGEF3O95398 923 aa8.48□□□□□ -1.05
UBP1-206ENST00000464787 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
UBP1-206ENST00000464787 STK24Q9Y6E0 443 aa8.48□□□□□ -1.05
UBP1-206ENST00000464787 CCDC18Q5T9S5 1454 aa8.48□□□□□ -1.05
UBP1-206ENST00000464787 ARAP3Q8WWN8 1544 aa8.48□□□□□ -1.05
UBP1-206ENST00000464787 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
UBP1-206ENST00000464787 PLCH2O75038 1416 aa8.46□□□□□ -1.05
UBP1-206ENST00000464787 FANCAO15360 1455 aa8.46□□□□□ -1.05
UBP1-206ENST00000464787 NEO1Q92859 1461 aa8.46□□□□□ -1.05
UBP1-206ENST00000464787 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
UBP1-206ENST00000464787 FRMPD1Q5SYB0 1578 aa8.46□□□□□ -1.06
UBP1-206ENST00000464787 AKNAQ7Z591 1439 aa8.46□□□□□ -1.06
UBP1-206ENST00000464787 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
UBP1-206ENST00000464787 MYO5CQ9NQX4 1742 aa8.44□□□□□ -1.06
UBP1-206ENST00000464787 KDM4FA0A1W2PPD8 638 aa8.44□□□□□ -1.06
UBP1-206ENST00000464787 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
UBP1-206ENST00000464787 BCL11BQ9C0K0 894 aaPredicted RBP8.44□□□□□ -1.06
UBP1-206ENST00000464787 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.44□□□□□ -1.06
UBP1-206ENST00000464787 PHLDB1Q86UU1 1377 aa8.44□□□□□ -1.06
UBP1-206ENST00000464787 CDC42BPBQ9Y5S2 1711 aa8.43□□□□□ -1.06
UBP1-206ENST00000464787 VPS8Q8N3P4 1428 aa8.43□□□□□ -1.06
UBP1-206ENST00000464787 RICTORQ6R327 1708 aa8.43□□□□□ -1.06
UBP1-206ENST00000464787 EFCAB2Q5VUJ9 269 aa8.42□□□□□ -1.06
UBP1-206ENST00000464787 WDR70Q9NW82 654 aa8.42□□□□□ -1.06
UBP1-206ENST00000464787 ADGRL1O94910 1474 aa8.42□□□□□ -1.06
UBP1-206ENST00000464787 CDC42BPAQ5VT25 1732 aa8.42□□□□□ -1.06
UBP1-206ENST00000464787 CFAP74Q9C0B2 1584 aa8.41□□□□□ -1.06
UBP1-206ENST00000464787 ARHGAP5Q13017 1502 aa8.41□□□□□ -1.06
UBP1-206ENST00000464787 DENND4BO75064 1496 aaPredicted RBP8.41□□□□□ -1.06
UBP1-206ENST00000464787 SCAPERQ9BY12 1400 aa8.41□□□□□ -1.06
UBP1-206ENST00000464787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
UBP1-206ENST00000464787 ZFP91Q96JP5 570 aaPredicted RBP8.41□□□□□ -1.06
UBP1-206ENST00000464787 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
UBP1-206ENST00000464787 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.06
UBP1-206ENST00000464787 MTUS2Q5JR59 1369 aa8.4□□□□□ -1.06
UBP1-206ENST00000464787 PSEN1P49768 467 aa8.4□□□□□ -1.06
UBP1-206ENST00000464787 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
UBP1-206ENST00000464787 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
UBP1-206ENST00000464787 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
UBP1-206ENST00000464787 TIAM1Q13009 1591 aa8.39□□□□□ -1.07
UBP1-206ENST00000464787 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
UBP1-206ENST00000464787 POGZQ7Z3K3 1410 aa8.39□□□□□ -1.07
UBP1-206ENST00000464787 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
UBP1-206ENST00000464787 AFAP1Q8N556 730 aa8.39□□□□□ -1.07
UBP1-206ENST00000464787 YEATS2Q9ULM3 1422 aa8.38□□□□□ -1.07
UBP1-206ENST00000464787 SIGLEC1Q9BZZ2 1709 aa8.38□□□□□ -1.07
UBP1-206ENST00000464787 DPY19L2Q6NUT2 758 aa8.38□□□□□ -1.07
UBP1-206ENST00000464787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBP1-206ENST00000464787 ZMYM4Q5VZL5 1548 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms