RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 ROCK1Q13464 1354 aa38.55■■■■□ 3.76
PAXBP1-206ENST00000464256 PLPPR3Q6T4P5 718 aa38.54■■■■□ 3.76
PAXBP1-206ENST00000464256 ANKRD50Q9ULJ7 1429 aa38.49■■■■□ 3.75
PAXBP1-206ENST00000464256 AEBP2Q6ZN18 517 aaPredicted RBP38.49■■■■□ 3.75
PAXBP1-206ENST00000464256 C3P01024 1663 aa38.48■■■■□ 3.75
PAXBP1-206ENST00000464256 DEPDC5O75140 1603 aa38.47■■■■□ 3.75
PAXBP1-206ENST00000464256 CEBPAP49715 358 aaPredicted RBP38.47■■■■□ 3.75
PAXBP1-206ENST00000464256 CEP152O94986 1710 aa38.46■■■■□ 3.75
PAXBP1-206ENST00000464256 MROH2AA6NES4 1674 aa38.43■■■■□ 3.74
PAXBP1-206ENST00000464256 GCC2Q8IWJ2 1684 aa38.43■■■■□ 3.74
PAXBP1-206ENST00000464256 PRDM15P57071 1507 aaPredicted RBP38.41■■■■□ 3.74
PAXBP1-206ENST00000464256 ESF1Q9H501 851 aaKnown RBP38.41■■■■□ 3.74
PAXBP1-206ENST00000464256 KDM5DQ9BY66 1539 aa38.4■■■■□ 3.74
PAXBP1-206ENST00000464256 NAIPQ13075 1403 aa38.39■■■■□ 3.74
PAXBP1-206ENST00000464256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.39■■■■□ 3.742e-7■■■□□ 14.8
PAXBP1-206ENST00000464256 CNTLNQ9NXG0 1405 aa38.37■■■■□ 3.73
PAXBP1-206ENST00000464256 ABCC3O15438 1527 aa38.37■■■■□ 3.73
PAXBP1-206ENST00000464256 WASHC2CQ9Y4E1 1318 aa38.34■■■■□ 3.73
PAXBP1-206ENST00000464256 ZMYM3Q14202 1370 aa38.34■■■■□ 3.73
PAXBP1-206ENST00000464256 ZC3H13Q5T200 1668 aaKnown RBP38.33■■■■□ 3.73
PAXBP1-206ENST00000464256 UNC13BO14795 1591 aa38.32■■■■□ 3.72
PAXBP1-206ENST00000464256 PPP6R1Q9UPN7 881 aa38.31■■■■□ 3.72
PAXBP1-206ENST00000464256 HFM1A2PYH4 1435 aa38.31■■■■□ 3.72
PAXBP1-206ENST00000464256 VWDEQ8N2E2 1590 aa38.3■■■■□ 3.72
PAXBP1-206ENST00000464256 CFAP65Q6ZU64 1925 aaKnown RBP38.3■■■■□ 3.72
PAXBP1-206ENST00000464256 CAMSAP1Q5T5Y3 1602 aa38.29■■■■□ 3.72
PAXBP1-206ENST00000464256 FAM135AQ9P2D6 1515 aa38.29■■■■□ 3.72
PAXBP1-206ENST00000464256 FBXO31Q5XUX0 539 aaPredicted RBP38.19■■■■□ 3.7
PAXBP1-206ENST00000464256 KANK1Q14678 1352 aa38.19■■■■□ 3.7
PAXBP1-206ENST00000464256 PZPP20742 1482 aa38.17■■■■□ 3.7
PAXBP1-206ENST00000464256 IQGAP3Q86VI3 1631 aa38.16■■■■□ 3.7
PAXBP1-206ENST00000464256 SETD1BQ9UPS6 1966 aaKnown RBP38.16■■■■□ 3.7
PAXBP1-206ENST00000464256 LMTK2Q8IWU2 1503 aa38.15■■■■□ 3.7
PAXBP1-206ENST00000464256 PREX1Q8TCU6 1659 aa38.13■■■■□ 3.69
PAXBP1-206ENST00000464256 NUP155O75694 1391 aa38.12■■■■□ 3.69
PAXBP1-206ENST00000464256 EFCAB6Q5THR3 1501 aa38.11■■■■□ 3.69
PAXBP1-206ENST00000464256 TET3O43151 1660 aa38.1■■■■□ 3.69
PAXBP1-206ENST00000464256 NPATQ14207 1427 aa38.1■■■■□ 3.69
PAXBP1-206ENST00000464256 LMTK3Q96Q04 1460 aa38.08■■■■□ 3.69
PAXBP1-206ENST00000464256 MYO3AQ8NEV4 1616 aa38.06■■■■□ 3.68
PAXBP1-206ENST00000464256 E9PCH4 1651 aa38.05■■■■□ 3.68
PAXBP1-206ENST00000464256 SETD5Q9C0A6 1442 aa38.04■■■■□ 3.68
PAXBP1-206ENST00000464256 ERVK-7P63135 1459 aa38.04■■■■□ 3.68
PAXBP1-206ENST00000464256 ARHGAP31Q2M1Z3 1444 aa38.04■■■■□ 3.68
PAXBP1-206ENST00000464256 SPATA31D1Q6ZQQ2 1576 aa38.03■■■■□ 3.68
PAXBP1-206ENST00000464256 RAB3GAP2Q9H2M9 1393 aa37.99■■■■□ 3.67
PAXBP1-206ENST00000464256 TRIM52Q96A61 297 aa37.98■■■■□ 3.67
PAXBP1-206ENST00000464256 TNRQ92752 1358 aa37.98■■■■□ 3.67
PAXBP1-206ENST00000464256 UHRF1BP1Q6BDS2 1440 aa37.97■■■■□ 3.67
PAXBP1-206ENST00000464256 HSPA2P54652 639 aa37.95■■■■□ 3.67
PAXBP1-206ENST00000464256 ZNF142P52746 1687 aaPredicted RBP37.93■■■■□ 3.66
PAXBP1-206ENST00000464256 SYNMO15061 1565 aa37.93■■■■□ 3.66
PAXBP1-206ENST00000464256 CEP170BQ9Y4F5 1589 aaPredicted RBP37.92■■■■□ 3.66
PAXBP1-206ENST00000464256 RPRD2Q5VT52 1461 aaKnown RBP37.87■■■■□ 3.65
PAXBP1-206ENST00000464256 TRIM26Q12899 539 aaPredicted RBP37.87■■■■□ 3.65
PAXBP1-206ENST00000464256 NOS1P29475 1434 aa37.87■■■■□ 3.65
PAXBP1-206ENST00000464256 UGGT1Q9NYU2 1555 aa37.82■■■■□ 3.65
PAXBP1-206ENST00000464256 A2ML1A8K2U0 1454 aa37.82■■■■□ 3.65
PAXBP1-206ENST00000464256 SPHKAPQ2M3C7 1700 aa37.81■■■■□ 3.64
PAXBP1-206ENST00000464256 SLC4A1APQ9BWU0 796 aaKnown RBP37.8■■■■□ 3.64
PAXBP1-206ENST00000464256 PIK3C2BO00750 1634 aa37.8■■■■□ 3.64
PAXBP1-206ENST00000464256 NLRP1Q9C000 1473 aa37.79■■■■□ 3.64
PAXBP1-206ENST00000464256 PKD2Q13563 968 aa37.78■■■■□ 3.64
PAXBP1-206ENST00000464256 FOXD1Q16676 465 aa37.77■■■■□ 3.64
PAXBP1-206ENST00000464256 UBR1Q8IWV7 1749 aa37.76■■■■□ 3.64
PAXBP1-206ENST00000464256 STRCQ7RTU9 1775 aa37.73■■■■□ 3.63
PAXBP1-206ENST00000464256 MPHOSPH9Q99550 1183 aa37.73■■■■□ 3.63
PAXBP1-206ENST00000464256 MYO5BQ9ULV0 1848 aa37.73■■■■□ 3.63
PAXBP1-206ENST00000464256 IDI1Q13907 227 aa37.72■■■■□ 3.63
PAXBP1-206ENST00000464256 PLA2R1Q13018 1463 aa37.68■■■■□ 3.62
PAXBP1-206ENST00000464256 PTPRTO14522 1441 aa37.68■■■■□ 3.62
PAXBP1-206ENST00000464256 CLTCL1P53675 1640 aa37.64■■■■□ 3.62
PAXBP1-206ENST00000464256 TRPM2O94759 1503 aa37.62■■■■□ 3.61
PAXBP1-206ENST00000464256 HRCP23327 699 aa37.61■■■■□ 3.61
PAXBP1-206ENST00000464256 ADGRB3O60242 1522 aa37.61■■■■□ 3.61
PAXBP1-206ENST00000464256 TMEM131LA2VDJ0 1609 aa37.59■■■■□ 3.61
PAXBP1-206ENST00000464256 SLC52A1Q9NWF4 448 aa37.59■■■■□ 3.61
PAXBP1-206ENST00000464256 KDM5AP29375 1690 aaKnown RBP37.58■■■■□ 3.61
PAXBP1-206ENST00000464256 NCKAP5LQ9HCH0 1330 aa37.56■■■■□ 3.6
PAXBP1-206ENST00000464256 POLR1AO95602 1720 aaPredicted RBP37.56■■■■□ 3.6
PAXBP1-206ENST00000464256 THEMISQ8N1K5 641 aaPredicted RBP37.54■■■■□ 3.6
PAXBP1-206ENST00000464256 STAG3Q9UJ98 1225 aa37.53■■■■□ 3.6
PAXBP1-206ENST00000464256 ACIN1Q9UKV3 1341 aaKnown RBP37.52■■■■□ 3.6
PAXBP1-206ENST00000464256 PCGF6Q9BYE7 350 aa37.51■■■■□ 3.6
PAXBP1-206ENST00000464256 NEURL4Q96JN8 1562 aa37.51■■■■□ 3.6
PAXBP1-206ENST00000464256 CHGAP10645 457 aaKnown RBP37.5■■■■□ 3.59
PAXBP1-206ENST00000464256 KIF1BO60333 1816 aa37.49■■■■□ 3.59
PAXBP1-206ENST00000464256 ARHGAP23Q9P227 1491 aa37.47■■■■□ 3.59
PAXBP1-206ENST00000464256 SLIT1O75093 1534 aa37.47■■■■□ 3.59
PAXBP1-206ENST00000464256 TMEM2Q9UHN6 1383 aa37.44■■■■□ 3.58
PAXBP1-206ENST00000464256 LTKP29376 864 aa37.43■■■■□ 3.58
PAXBP1-206ENST00000464256 ANKLE2Q86XL3 938 aa37.38■■■■□ 3.57
PAXBP1-206ENST00000464256 CCDC144AA2RUR9 1427 aa37.37■■■■□ 3.57
PAXBP1-206ENST00000464256 ANKRD30BQ9BXX2 1392 aa37.37■■■■□ 3.57
PAXBP1-206ENST00000464256 SCAF11Q99590 1463 aaKnown RBP37.37■■■■□ 3.57
PAXBP1-206ENST00000464256 ZFYVE9O95405 1425 aa37.36■■■■□ 3.57
PAXBP1-206ENST00000464256 NUTM2DQ5VT03 806 aaPredicted RBP37.35■■■■□ 3.57
PAXBP1-206ENST00000464256 SENP3Q9H4L4 574 aaPredicted RBP37.35■■■■□ 3.57
PAXBP1-206ENST00000464256 TXNDC2Q86VQ3 553 aa37.34■■■■□ 3.57
PAXBP1-206ENST00000464256 IQGAP1P46940 1657 aa37.34■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms