RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 NISCHQ9Y2I1 1504 aa61.18■■■■■ 7.39
PAXBP1-206ENST00000464256 CCDC180Q9P1Z9 1646 aa54.21■■■■■ 6.27
PAXBP1-206ENST00000464256 ABCC9O60706 1549 aa52.83■■■■■ 6.05
PAXBP1-206ENST00000464256 ZCCHC6Q5VYS8 1495 aaKnown RBP51.06■■■■■ 5.76
PAXBP1-206ENST00000464256 DCAF8L2P0C7V8 631 aa51.02■■■■■ 5.76
PAXBP1-206ENST00000464256 RB1CC1Q8TDY2 1594 aa50.82■■■■■ 5.73
PAXBP1-206ENST00000464256 NACADO15069 1562 aa50.82■■■■■ 5.73
PAXBP1-206ENST00000464256 MYO15BQ96JP2 1530 aa50.55■■■■■ 5.68
PAXBP1-206ENST00000464256 DCAF1Q9Y4B6 1507 aa50.52■■■■■ 5.68
PAXBP1-206ENST00000464256 UNC13AQ9UPW8 1703 aa49.97■■■■■ 5.59
PAXBP1-206ENST00000464256 SCRIBQ14160 1630 aa49.66■■■■■ 5.54
PAXBP1-206ENST00000464256 BICRAQ9NZM4 1560 aa49.44■■■■■ 5.51
PAXBP1-206ENST00000464256 PABPN1Q86U42 306 aaKnown RBP eCLIP49.44■■■■■ 5.5
PAXBP1-206ENST00000464256 SHROOM4Q9ULL8 1493 aa48.72■■■■■ 5.39
PAXBP1-206ENST00000464256 DNAJC5BQ9UF47 199 aa48.24■■■■■ 5.31
PAXBP1-206ENST00000464256 EIF4G1Q04637 1599 aaKnown RBP48.04■■■■■ 5.28
PAXBP1-206ENST00000464256 CC2D2AQ9P2K1 1620 aa47.8■■■■■ 5.24
PAXBP1-206ENST00000464256 CECR2Q9BXF3 1484 aa47.76■■■■■ 5.24
PAXBP1-206ENST00000464256 SMARCA4P51532 1647 aa47.46■■■■■ 5.19
PAXBP1-206ENST00000464256 BAZ1AQ9NRL2 1556 aaPredicted RBP47.35■■■■■ 5.17
PAXBP1-206ENST00000464256 MROH2BQ7Z745 1585 aa47.26■■■■■ 5.16
PAXBP1-206ENST00000464256 ATAD2BQ9ULI0 1458 aa47.05■■■■■ 5.12
PAXBP1-206ENST00000464256 SMARCA2P51531 1590 aa46.94■■■■■ 5.1
PAXBP1-206ENST00000464256 NCAPD3P42695 1498 aa46.9■■■■■ 5.1
PAXBP1-206ENST00000464256 PEG3Q9GZU2 1588 aa46.9■■■■■ 5.1
PAXBP1-206ENST00000464256 WIZO95785 1651 aa46.83■■■■■ 5.09
PAXBP1-206ENST00000464256 RSF1Q96T23 1441 aaPredicted RBP46.78■■■■■ 5.08
PAXBP1-206ENST00000464256 HMGXB3Q12766 1538 aa46.73■■■■■ 5.07
PAXBP1-206ENST00000464256 BAZ1BQ9UIG0 1483 aaKnown RBP46.67■■■■■ 5.06
PAXBP1-206ENST00000464256 TOP2AP11388 1531 aaKnown RBP46.2■■■■■ 4.99
PAXBP1-206ENST00000464256 SUPT5HO00267 1087 aaKnown RBP45.92■■■■■ 4.94
PAXBP1-206ENST00000464256 NESP48681 1621 aa45.89■■■■■ 4.94
PAXBP1-206ENST00000464256 CCDC88BA6NC98 1476 aa45.7■■■■■ 4.91
PAXBP1-206ENST00000464256 LAMC3Q9Y6N6 1575 aa45.63■■■■■ 4.9
PAXBP1-206ENST00000464256 CADPSQ9ULU8 1353 aa45.56■■■■■ 4.88
PAXBP1-206ENST00000464256 CFTRP13569 1480 aa45.39■■■■■ 4.86
PAXBP1-206ENST00000464256 ERCC6Q03468 1493 aa45.39■■■■■ 4.86
PAXBP1-206ENST00000464256 KIF21AQ7Z4S6 1674 aa45.38■■■■■ 4.86
PAXBP1-206ENST00000464256 PDS5BQ9NTI5 1447 aa45.24■■■■■ 4.83
PAXBP1-206ENST00000464256 PRDM2Q13029 1718 aa45.2■■■■■ 4.83
PAXBP1-206ENST00000464256 FANCD2Q9BXW9 1451 aa45.1■■■■■ 4.81
PAXBP1-206ENST00000464256 THOC2Q8NI27 1593 aaKnown RBP45.06■■■■■ 4.8
PAXBP1-206ENST00000464256 CEP164Q9UPV0 1460 aa44.98■■■■■ 4.79
PAXBP1-206ENST00000464256 MRC2Q9UBG0 1479 aa44.84■■■■■ 4.77
PAXBP1-206ENST00000464256 WDR62O43379 1518 aa44.71■■■■■ 4.75
PAXBP1-206ENST00000464256 CUX2O14529 1486 aa44.71■■■■■ 4.75
PAXBP1-206ENST00000464256 URB2Q14146 1524 aaKnown RBP44.7■■■■■ 4.75
PAXBP1-206ENST00000464256 TOPBP1Q92547 1522 aa44.45■■■■■ 4.71
PAXBP1-206ENST00000464256 DNMBPQ6XZF7 1577 aa44.4■■■■■ 4.7
PAXBP1-206ENST00000464256 CUX1P39880 1505 aa44.3■■■■■ 4.68
PAXBP1-206ENST00000464256 ABCC8Q09428 1581 aa44.27■■■■■ 4.68
PAXBP1-206ENST00000464256 POLA1P09884 1462 aaPredicted RBP44.1■■■■■ 4.65
PAXBP1-206ENST00000464256 SYNJ1O43426 1573 aa44.07■■■■■ 4.65
PAXBP1-206ENST00000464256 FGD5Q6ZNL6 1462 aa44.06■■■■■ 4.64
PAXBP1-206ENST00000464256 WRNQ14191 1432 aaPredicted RBP eCLIP44.05■■■■■ 4.64
PAXBP1-206ENST00000464256 TARBP1Q13395 1621 aaKnown RBP43.98■■■■■ 4.63
PAXBP1-206ENST00000464256 IFT140Q96RY7 1462 aa43.98■■■■■ 4.63
PAXBP1-206ENST00000464256 RAD54L2Q9Y4B4 1467 aa43.98■■■■■ 4.63
PAXBP1-206ENST00000464256 BIVM-ERCC5R4GMW8 1640 aa43.98■■■■■ 4.63
PAXBP1-206ENST00000464256 TOP2BQ02880 1626 aa43.96■■■■■ 4.63
PAXBP1-206ENST00000464256 ZNF608Q9ULD9 1512 aaPredicted RBP43.93■■■■■ 4.62
PAXBP1-206ENST00000464256 SOGA1O94964 1423 aa43.86■■■■■ 4.61
PAXBP1-206ENST00000464256 EIF4G3O43432 1585 aaKnown RBP43.76■■■■■ 4.6
PAXBP1-206ENST00000464256 WDR97A6NE52 1622 aa43.75■■■■■ 4.59
PAXBP1-206ENST00000464256 AQRO60306 1485 aaKnown RBP eCLIP43.7■■■■■ 4.595e-12■■■■■ 58.3
PAXBP1-206ENST00000464256 TDRD9Q8NDG6 1382 aaKnown RBP43.65■■■■■ 4.58
PAXBP1-206ENST00000464256 ABCA10Q8WWZ4 1543 aa43.57■■■■■ 4.57
PAXBP1-206ENST00000464256 ABCA5Q8WWZ7 1642 aa43.46■■■■■ 4.55
PAXBP1-206ENST00000464256 PBRM1Q86U86 1689 aa43.4■■■■■ 4.54
PAXBP1-206ENST00000464256 GAPVD1Q14C86 1478 aa43.38■■■■■ 4.54
PAXBP1-206ENST00000464256 GRIN2BQ13224 1484 aa43.28■■■■■ 4.52
PAXBP1-206ENST00000464256 SNAPC4Q5SXM2 1469 aa43.28■■■■■ 4.52
PAXBP1-206ENST00000464256 TRIM41Q8WV44 630 aa43.23■■■■■ 4.51
PAXBP1-206ENST00000464256 CHD1O14646 1710 aa43.2■■■■■ 4.51
PAXBP1-206ENST00000464256 MAGI1Q96QZ7 1491 aaPredicted RBP43.11■■■■■ 4.49
PAXBP1-206ENST00000464256 FBLN2P98095 1184 aa43.05■■■■■ 4.48
PAXBP1-206ENST00000464256 KIF27Q86VH2 1401 aa43.04■■■■■ 4.48
PAXBP1-206ENST00000464256 ERICH3Q5RHP9 1530 aa43.03■■■■■ 4.48
PAXBP1-206ENST00000464256 CHIC1Q5VXU3 224 aa43.03■■■■■ 4.48
PAXBP1-206ENST00000464256 RUSC2Q8N2Y8 1516 aa43.02■■■■■ 4.48
PAXBP1-206ENST00000464256 ADAMTS12P58397 1594 aa43.01■■■■■ 4.48
PAXBP1-206ENST00000464256 SYNJ2O15056 1496 aa42.97■■■■■ 4.47
PAXBP1-206ENST00000464256 DNAJC5Q9H3Z4 198 aa42.96■■■■■ 4.47
PAXBP1-206ENST00000464256 OSCARQ8IYS5 282 aa42.92■■■■■ 4.46
PAXBP1-206ENST00000464256 CHMP7Q8WUX9 453 aaPredicted RBP42.9■■■■■ 4.46
PAXBP1-206ENST00000464256 IGF1RP08069 1367 aa42.89■■■■■ 4.46
PAXBP1-206ENST00000464256 FHAD1B1AJZ9 1412 aa42.84■■■■■ 4.45
PAXBP1-206ENST00000464256 GRIN2AQ12879 1464 aa42.78■■■■■ 4.44
PAXBP1-206ENST00000464256 CUL7Q14999 1698 aa42.75■■■■■ 4.43
PAXBP1-206ENST00000464256 CEP170Q5SW79 1584 aa42.65■■■■■ 4.42
PAXBP1-206ENST00000464256 CLASP1Q7Z460 1538 aa42.63■■■■■ 4.41
PAXBP1-206ENST00000464256 CARMIL1Q5VZK9 1371 aa42.62■■■■■ 4.41
PAXBP1-206ENST00000464256 NUP160Q12769 1436 aa42.55■■■■■ 4.4
PAXBP1-206ENST00000464256 FAM9AQ8IZU1 332 aaPredicted RBP42.5■■■■■ 4.39
PAXBP1-206ENST00000464256 RAPGEF2Q9Y4G8 1499 aa42.4■■■■■ 4.38
PAXBP1-206ENST00000464256 RIMBP3CA6NJZ7 1639 aa42.39■■■■■ 4.38
PAXBP1-206ENST00000464256 RIMBP3BA6NNM3 1639 aa42.39■■■■■ 4.38
PAXBP1-206ENST00000464256 RIMBP3Q9UFD9 1639 aa42.39■■■■■ 4.38
PAXBP1-206ENST00000464256 CSRNP3Q8WYN3 585 aa42.37■■■■■ 4.37
PAXBP1-206ENST00000464256 PRXQ9BXM0 1461 aa42.37■■■■■ 4.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms