RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 ROCK1Q13464 1354 aa29.56■■■□□ 2.32
BCAS4-204ENST00000463943 RNF17Q9BXT8 1623 aaKnown RBP29.55■■■□□ 2.32
BCAS4-204ENST00000463943 CLTCQ00610 1675 aaKnown RBP29.55■■■□□ 2.32
BCAS4-204ENST00000463943 CEBPAP49715 358 aaPredicted RBP29.55■■■□□ 2.32
BCAS4-204ENST00000463943 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
BCAS4-204ENST00000463943 MROH1Q8NDA8 1641 aa29.51■■■□□ 2.31
BCAS4-204ENST00000463943 ANKRD50Q9ULJ7 1429 aa29.51■■■□□ 2.31
BCAS4-204ENST00000463943 C3P01024 1663 aa29.5■■■□□ 2.31
BCAS4-204ENST00000463943 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
BCAS4-204ENST00000463943 KDM5DQ9BY66 1539 aa29.49■■■□□ 2.31
BCAS4-204ENST00000463943 MROH2AA6NES4 1674 aa29.48■■■□□ 2.31
BCAS4-204ENST00000463943 WASHC2CQ9Y4E1 1318 aa29.47■■■□□ 2.31
BCAS4-204ENST00000463943 ZMYM3Q14202 1370 aa29.46■■■□□ 2.31
BCAS4-204ENST00000463943 DEPDC5O75140 1603 aa29.45■■■□□ 2.3
BCAS4-204ENST00000463943 PRDM15P57071 1507 aaPredicted RBP29.44■■■□□ 2.3
BCAS4-204ENST00000463943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.44■■■□□ 2.3
BCAS4-204ENST00000463943 FAM135AQ9P2D6 1515 aa29.43■■■□□ 2.3
BCAS4-204ENST00000463943 ABCC3O15438 1527 aa29.41■■■□□ 2.3
BCAS4-204ENST00000463943 CEP152O94986 1710 aa29.4■■■□□ 2.3
BCAS4-204ENST00000463943 ZC3H13Q5T200 1668 aaKnown RBP29.4■■■□□ 2.3
BCAS4-204ENST00000463943 NAIPQ13075 1403 aa29.37■■■□□ 2.29
BCAS4-204ENST00000463943 GCC2Q8IWJ2 1684 aa29.35■■■□□ 2.29
BCAS4-204ENST00000463943 KANK1Q14678 1352 aa29.35■■■□□ 2.29
BCAS4-204ENST00000463943 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
BCAS4-204ENST00000463943 VWDEQ8N2E2 1590 aa29.33■■■□□ 2.29
BCAS4-204ENST00000463943 CAMSAP1Q5T5Y3 1602 aa29.33■■■□□ 2.29
BCAS4-204ENST00000463943 UNC13BO14795 1591 aa29.32■■■□□ 2.28
BCAS4-204ENST00000463943 PZPP20742 1482 aa29.31■■■□□ 2.28
BCAS4-204ENST00000463943 FBXO31Q5XUX0 539 aaPredicted RBP29.29■■■□□ 2.28
BCAS4-204ENST00000463943 NPATQ14207 1427 aa29.29■■■□□ 2.28
BCAS4-204ENST00000463943 LMTK3Q96Q04 1460 aa29.28■■■□□ 2.28
BCAS4-204ENST00000463943 PREX1Q8TCU6 1659 aa29.28■■■□□ 2.28
BCAS4-204ENST00000463943 SETD1BQ9UPS6 1966 aaKnown RBP29.27■■■□□ 2.28
BCAS4-204ENST00000463943 LMTK2Q8IWU2 1503 aa29.26■■■□□ 2.27
BCAS4-204ENST00000463943 UHRF1BP1Q6BDS2 1440 aa29.24■■■□□ 2.27
BCAS4-204ENST00000463943 NUP155O75694 1391 aa29.22■■■□□ 2.27
BCAS4-204ENST00000463943 CFAP65Q6ZU64 1925 aaKnown RBP29.21■■■□□ 2.27
BCAS4-204ENST00000463943 ARHGAP31Q2M1Z3 1444 aa29.2■■■□□ 2.27
BCAS4-204ENST00000463943 IQGAP3Q86VI3 1631 aa29.2■■■□□ 2.26
BCAS4-204ENST00000463943 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.26
BCAS4-204ENST00000463943 MYO3AQ8NEV4 1616 aa29.19■■■□□ 2.26
BCAS4-204ENST00000463943 ERVK-7P63135 1459 aa29.18■■■□□ 2.26
BCAS4-204ENST00000463943 TNRQ92752 1358 aa29.18■■■□□ 2.26
BCAS4-204ENST00000463943 HSPA2P54652 639 aa29.17■■■□□ 2.26
BCAS4-204ENST00000463943 SPATA31D1Q6ZQQ2 1576 aa29.17■■■□□ 2.26
BCAS4-204ENST00000463943 TET3O43151 1660 aa29.17■■■□□ 2.26
BCAS4-204ENST00000463943 SETD5Q9C0A6 1442 aa29.12■■■□□ 2.25
BCAS4-204ENST00000463943 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
BCAS4-204ENST00000463943 CEP170BQ9Y4F5 1589 aaPredicted RBP29.11■■■□□ 2.25
BCAS4-204ENST00000463943 ZNF142P52746 1687 aaPredicted RBP29.1■■■□□ 2.25
BCAS4-204ENST00000463943 E9PCH4 1651 aa29.1■■■□□ 2.25
BCAS4-204ENST00000463943 RPRD2Q5VT52 1461 aaKnown RBP29.08■■■□□ 2.25
BCAS4-204ENST00000463943 A2ML1A8K2U0 1454 aa29.06■■■□□ 2.24
BCAS4-204ENST00000463943 NLRP1Q9C000 1473 aa29.05■■■□□ 2.24
BCAS4-204ENST00000463943 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
BCAS4-204ENST00000463943 NOS1P29475 1434 aa29.04■■■□□ 2.24
BCAS4-204ENST00000463943 SYNMO15061 1565 aa29.04■■■□□ 2.24
BCAS4-204ENST00000463943 UGGT1Q9NYU2 1555 aa29■■■□□ 2.23
BCAS4-204ENST00000463943 SLC4A1APQ9BWU0 796 aaKnown RBP28.98■■■□□ 2.23
BCAS4-204ENST00000463943 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
BCAS4-204ENST00000463943 PKD2Q13563 968 aa28.95■■■□□ 2.22
BCAS4-204ENST00000463943 IDI1Q13907 227 aa28.95■■■□□ 2.22
BCAS4-204ENST00000463943 UBR1Q8IWV7 1749 aa28.93■■■□□ 2.22
BCAS4-204ENST00000463943 STRCQ7RTU9 1775 aa28.93■■■□□ 2.22
BCAS4-204ENST00000463943 TRIM26Q12899 539 aaPredicted RBP28.92■■■□□ 2.22
BCAS4-204ENST00000463943 SPHKAPQ2M3C7 1700 aa28.92■■■□□ 2.22
BCAS4-204ENST00000463943 THEMISQ8N1K5 641 aaPredicted RBP28.91■■■□□ 2.22
BCAS4-204ENST00000463943 SLC52A1Q9NWF4 448 aa28.91■■■□□ 2.22
BCAS4-204ENST00000463943 MPHOSPH9Q99550 1183 aa28.9■■■□□ 2.22
BCAS4-204ENST00000463943 PLA2R1Q13018 1463 aa28.89■■■□□ 2.22
BCAS4-204ENST00000463943 FOXD1Q16676 465 aa28.89■■■□□ 2.22
BCAS4-204ENST00000463943 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
BCAS4-204ENST00000463943 ACIN1Q9UKV3 1341 aaKnown RBP28.88■■■□□ 2.21
BCAS4-204ENST00000463943 PTPRTO14522 1441 aa28.87■■■□□ 2.21
BCAS4-204ENST00000463943 NCKAP5LQ9HCH0 1330 aa28.85■■■□□ 2.21
BCAS4-204ENST00000463943 ADGRB3O60242 1522 aa28.84■■■□□ 2.21
BCAS4-204ENST00000463943 HRCP23327 699 aa28.84■■■□□ 2.21
BCAS4-204ENST00000463943 TRPM2O94759 1503 aa28.82■■■□□ 2.2
BCAS4-204ENST00000463943 KDM5AP29375 1690 aaKnown RBP28.82■■■□□ 2.2
BCAS4-204ENST00000463943 CHGAP10645 457 aaKnown RBP28.8■■■□□ 2.2
BCAS4-204ENST00000463943 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
BCAS4-204ENST00000463943 MYO5BQ9ULV0 1848 aa28.79■■■□□ 2.2
BCAS4-204ENST00000463943 CLTCL1P53675 1640 aa28.79■■■□□ 2.2
BCAS4-204ENST00000463943 TMEM131LA2VDJ0 1609 aa28.78■■■□□ 2.2
BCAS4-204ENST00000463943 ANKLE2Q86XL3 938 aa28.78■■■□□ 2.2
BCAS4-204ENST00000463943 SLIT1O75093 1534 aa28.76■■■□□ 2.2
BCAS4-204ENST00000463943 NEURL4Q96JN8 1562 aa28.76■■■□□ 2.19
BCAS4-204ENST00000463943 ARHGAP23Q9P227 1491 aa28.76■■■□□ 2.19
BCAS4-204ENST00000463943 TMEM2Q9UHN6 1383 aa28.76■■■□□ 2.19
BCAS4-204ENST00000463943 DMRT2Q9Y5R5 561 aa28.76■■■□□ 2.19
BCAS4-204ENST00000463943 LTKP29376 864 aa28.72■■■□□ 2.19
BCAS4-204ENST00000463943 SCAF11Q99590 1463 aaKnown RBP28.71■■■□□ 2.19
BCAS4-204ENST00000463943 TXNDC2Q86VQ3 553 aa28.71■■■□□ 2.19
BCAS4-204ENST00000463943 EID1Q9Y6B2 187 aa28.69■■■□□ 2.18
BCAS4-204ENST00000463943 KIF1BO60333 1816 aa28.67■■■□□ 2.18
BCAS4-204ENST00000463943 NPHP4O75161 1426 aaPredicted RBP28.67■■■□□ 2.18
BCAS4-204ENST00000463943 MED14O60244 1454 aa28.67■■■□□ 2.18
BCAS4-204ENST00000463943 CCDC144AA2RUR9 1427 aa28.66■■■□□ 2.18
BCAS4-204ENST00000463943 ZFYVE9O95405 1425 aa28.66■■■□□ 2.18
BCAS4-204ENST00000463943 IQGAP1P46940 1657 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms