RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 NISCHQ9Y2I1 1504 aa46.9■■■■■ 5.1
BCAS4-204ENST00000463943 CCDC180Q9P1Z9 1646 aa41.57■■■■■ 4.24
BCAS4-204ENST00000463943 ABCC9O60706 1549 aa40.57■■■■■ 4.09
BCAS4-204ENST00000463943 DCAF8L2P0C7V8 631 aa39.18■■■■□ 3.86
BCAS4-204ENST00000463943 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
BCAS4-204ENST00000463943 RB1CC1Q8TDY2 1594 aa39.05■■■■□ 3.84
BCAS4-204ENST00000463943 NACADO15069 1562 aa39.03■■■■□ 3.84
BCAS4-204ENST00000463943 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
BCAS4-204ENST00000463943 DCAF1Q9Y4B6 1507 aa38.76■■■■□ 3.8
BCAS4-204ENST00000463943 UNC13AQ9UPW8 1703 aa38.23■■■■□ 3.71
BCAS4-204ENST00000463943 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
BCAS4-204ENST00000463943 PABPN1Q86U42 306 aaKnown RBP eCLIP37.96■■■■□ 3.67
BCAS4-204ENST00000463943 BICRAQ9NZM4 1560 aa37.9■■■■□ 3.66
BCAS4-204ENST00000463943 SHROOM4Q9ULL8 1493 aa37.41■■■■□ 3.58
BCAS4-204ENST00000463943 DNAJC5BQ9UF47 199 aa37.07■■■■□ 3.53
BCAS4-204ENST00000463943 EIF4G1Q04637 1599 aaKnown RBP36.88■■■■□ 3.5
BCAS4-204ENST00000463943 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
BCAS4-204ENST00000463943 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
BCAS4-204ENST00000463943 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
BCAS4-204ENST00000463943 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.41
BCAS4-204ENST00000463943 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
BCAS4-204ENST00000463943 ATAD2BQ9ULI0 1458 aa36.1■■■■□ 3.37
BCAS4-204ENST00000463943 SMARCA2P51531 1590 aa36.04■■■■□ 3.36
BCAS4-204ENST00000463943 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
BCAS4-204ENST00000463943 PEG3Q9GZU2 1588 aa35.97■■■■□ 3.35
BCAS4-204ENST00000463943 HMGXB3Q12766 1538 aa35.87■■■■□ 3.33
BCAS4-204ENST00000463943 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
BCAS4-204ENST00000463943 WIZO95785 1651 aa35.83■■■■□ 3.33
BCAS4-204ENST00000463943 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.32
BCAS4-204ENST00000463943 TOP2AP11388 1531 aaKnown RBP35.41■■■■□ 3.26
BCAS4-204ENST00000463943 NESP48681 1621 aa35.19■■■■□ 3.22
BCAS4-204ENST00000463943 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
BCAS4-204ENST00000463943 LAMC3Q9Y6N6 1575 aa35.06■■■■□ 3.2
BCAS4-204ENST00000463943 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
BCAS4-204ENST00000463943 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
BCAS4-204ENST00000463943 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
BCAS4-204ENST00000463943 CFTRP13569 1480 aa34.84■■■■□ 3.17
BCAS4-204ENST00000463943 PDS5BQ9NTI5 1447 aa34.8■■■■□ 3.16
BCAS4-204ENST00000463943 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.16
BCAS4-204ENST00000463943 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
BCAS4-204ENST00000463943 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
BCAS4-204ENST00000463943 THOC2Q8NI27 1593 aaKnown RBP34.58■■■■□ 3.13
BCAS4-204ENST00000463943 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
BCAS4-204ENST00000463943 MRC2Q9UBG0 1479 aa34.45■■■■□ 3.1
BCAS4-204ENST00000463943 CUX2O14529 1486 aa34.44■■■■□ 3.1
BCAS4-204ENST00000463943 WDR62O43379 1518 aa34.34■■■■□ 3.09
BCAS4-204ENST00000463943 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
BCAS4-204ENST00000463943 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
BCAS4-204ENST00000463943 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
BCAS4-204ENST00000463943 ABCC8Q09428 1581 aa34.03■■■■□ 3.04
BCAS4-204ENST00000463943 CUX1P39880 1505 aa33.92■■■■□ 3.02
BCAS4-204ENST00000463943 POLA1P09884 1462 aaPredicted RBP33.83■■■■□ 3.01
BCAS4-204ENST00000463943 IFT140Q96RY7 1462 aa33.8■■■■□ 3
BCAS4-204ENST00000463943 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
BCAS4-204ENST00000463943 WRNQ14191 1432 aaPredicted RBP eCLIP33.78■■■■□ 3
BCAS4-204ENST00000463943 TARBP1Q13395 1621 aaKnown RBP33.71■■■□□ 2.99
BCAS4-204ENST00000463943 SYNJ1O43426 1573 aa33.71■■■□□ 2.99
BCAS4-204ENST00000463943 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
BCAS4-204ENST00000463943 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
BCAS4-204ENST00000463943 SOGA1O94964 1423 aa33.68■■■□□ 2.98
BCAS4-204ENST00000463943 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
BCAS4-204ENST00000463943 BIVM-ERCC5R4GMW8 1640 aa33.66■■■□□ 2.98
BCAS4-204ENST00000463943 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
BCAS4-204ENST00000463943 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.96
BCAS4-204ENST00000463943 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
BCAS4-204ENST00000463943 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
BCAS4-204ENST00000463943 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
BCAS4-204ENST00000463943 ABCA5Q8WWZ7 1642 aa33.3■■■□□ 2.92
BCAS4-204ENST00000463943 GAPVD1Q14C86 1478 aa33.3■■■□□ 2.92
BCAS4-204ENST00000463943 GRIN2BQ13224 1484 aa33.24■■■□□ 2.91
BCAS4-204ENST00000463943 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
BCAS4-204ENST00000463943 SNAPC4Q5SXM2 1469 aa33.21■■■□□ 2.91
BCAS4-204ENST00000463943 DNAJC5Q9H3Z4 198 aa33.16■■■□□ 2.9
BCAS4-204ENST00000463943 TRIM41Q8WV44 630 aa33.12■■■□□ 2.89
BCAS4-204ENST00000463943 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
BCAS4-204ENST00000463943 FBLN2P98095 1184 aa33.11■■■□□ 2.89
BCAS4-204ENST00000463943 CHD1O14646 1710 aa33.1■■■□□ 2.89
BCAS4-204ENST00000463943 OSCARQ8IYS5 282 aa33.07■■■□□ 2.88
BCAS4-204ENST00000463943 ERICH3Q5RHP9 1530 aa33.03■■■□□ 2.88
BCAS4-204ENST00000463943 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
BCAS4-204ENST00000463943 SYNJ2O15056 1496 aa33.01■■■□□ 2.88
BCAS4-204ENST00000463943 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
BCAS4-204ENST00000463943 ADAMTS12P58397 1594 aa32.97■■■□□ 2.87
BCAS4-204ENST00000463943 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
BCAS4-204ENST00000463943 IGF1RP08069 1367 aa32.88■■■□□ 2.85
BCAS4-204ENST00000463943 RUSC2Q8N2Y8 1516 aa32.88■■■□□ 2.85
BCAS4-204ENST00000463943 CHIC1Q5VXU3 224 aa32.86■■■□□ 2.85
BCAS4-204ENST00000463943 GRIN2AQ12879 1464 aa32.84■■■□□ 2.85
BCAS4-204ENST00000463943 CUL7Q14999 1698 aa32.77■■■□□ 2.84
BCAS4-204ENST00000463943 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
BCAS4-204ENST00000463943 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
BCAS4-204ENST00000463943 CARMIL1Q5VZK9 1371 aa32.69■■■□□ 2.82
BCAS4-204ENST00000463943 NUP160Q12769 1436 aa32.66■■■□□ 2.82
BCAS4-204ENST00000463943 ARHGEF11O15085 1522 aa32.57■■■□□ 2.8
BCAS4-204ENST00000463943 RIMBP3CA6NJZ7 1639 aa32.55■■■□□ 2.8
BCAS4-204ENST00000463943 RIMBP3BA6NNM3 1639 aa32.55■■■□□ 2.8
BCAS4-204ENST00000463943 RIMBP3Q9UFD9 1639 aa32.55■■■□□ 2.8
BCAS4-204ENST00000463943 RAPGEF2Q9Y4G8 1499 aa32.52■■■□□ 2.8
BCAS4-204ENST00000463943 FAM9AQ8IZU1 332 aaPredicted RBP32.5■■■□□ 2.79
BCAS4-204ENST00000463943 EEA1Q15075 1411 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms