RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
SMC4-204ENST00000462787 FGD1P98174 961 aa19.7■□□□□ 0.74
SMC4-204ENST00000462787 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
SMC4-204ENST00000462787 OS9Q13438 667 aaPredicted RBP19.68■□□□□ 0.74
SMC4-204ENST00000462787 FAM13BQ9NYF5 915 aa19.68■□□□□ 0.74
SMC4-204ENST00000462787 PANK3Q9H999 370 aa19.67■□□□□ 0.74
SMC4-204ENST00000462787 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
SMC4-204ENST00000462787 SMG6Q86US8 1419 aaKnown RBP19.67■□□□□ 0.74
SMC4-204ENST00000462787 POGKQ9P215 609 aa19.67■□□□□ 0.74
SMC4-204ENST00000462787 AAMPQ13685 434 aa19.67■□□□□ 0.74
SMC4-204ENST00000462787 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
SMC4-204ENST00000462787 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
SMC4-204ENST00000462787 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
SMC4-204ENST00000462787 KANK1Q14678 1352 aa19.66■□□□□ 0.74
SMC4-204ENST00000462787 COG6Q9Y2V7 657 aa19.65■□□□□ 0.74
SMC4-204ENST00000462787 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
SMC4-204ENST00000462787 APBB1O00213 710 aa19.61■□□□□ 0.73
SMC4-204ENST00000462787 ISY1Q9ULR0 285 aaKnown RBP19.61■□□□□ 0.73
SMC4-204ENST00000462787 AKNAQ7Z591 1439 aa19.6■□□□□ 0.73
SMC4-204ENST00000462787 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
SMC4-204ENST00000462787 RRP9O43818 475 aaKnown RBP19.59■□□□□ 0.73
SMC4-204ENST00000462787 HMMRO75330 724 aa19.59■□□□□ 0.73
SMC4-204ENST00000462787 TRAK2O60296 914 aa19.59■□□□□ 0.73
SMC4-204ENST00000462787 LRRC9Q6ZRR7 1453 aa19.58■□□□□ 0.73
SMC4-204ENST00000462787 KIF16BQ96L93 1317 aa19.58■□□□□ 0.72
SMC4-204ENST00000462787 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.72
SMC4-204ENST00000462787 SRPK2P78362 688 aaKnown RBP19.57■□□□□ 0.72
SMC4-204ENST00000462787 NUCB2P80303 420 aa19.56■□□□□ 0.72
SMC4-204ENST00000462787 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
SMC4-204ENST00000462787 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
SMC4-204ENST00000462787 NASPP49321 788 aaPredicted RBP19.55■□□□□ 0.72
SMC4-204ENST00000462787 TPM4P67936 248 aa19.55■□□□□ 0.72
SMC4-204ENST00000462787 ZNF771Q7L3S4 317 aaPredicted RBP19.55■□□□□ 0.72
SMC4-204ENST00000462787 APAF1O14727 1248 aa19.54■□□□□ 0.72
SMC4-204ENST00000462787 NAP1L2Q9ULW6 460 aaPredicted RBP19.54■□□□□ 0.72
SMC4-204ENST00000462787 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
SMC4-204ENST00000462787 ATP6V1DQ9Y5K8 247 aa19.53■□□□□ 0.72
SMC4-204ENST00000462787 ANKRD45Q5TZF3 282 aa19.52■□□□□ 0.72
SMC4-204ENST00000462787 HDGFL2Q7Z4V5 671 aaPredicted RBP19.52■□□□□ 0.72
SMC4-204ENST00000462787 R3HCC1Q9Y3T6 440 aaKnown RBP19.52■□□□□ 0.72
SMC4-204ENST00000462787 MIA2Q96PC5 1412 aa19.52■□□□□ 0.72
SMC4-204ENST00000462787 CCDC173Q0VFZ6 552 aa19.51■□□□□ 0.71
SMC4-204ENST00000462787 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
SMC4-204ENST00000462787 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 BCL2L13Q9BXK5 485 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 MYOM3Q5VTT5 1437 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 CUX1P39880 1505 aa19.5■□□□□ 0.71
SMC4-204ENST00000462787 UBE2Q2Q8WVN8 375 aa19.49■□□□□ 0.71
SMC4-204ENST00000462787 FOXD4L5Q5VV16 416 aaPredicted RBP19.49■□□□□ 0.71
SMC4-204ENST00000462787 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
SMC4-204ENST00000462787 FOXD4L4Q8WXT5 416 aaPredicted RBP19.49■□□□□ 0.71
SMC4-204ENST00000462787 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
SMC4-204ENST00000462787 TRIM6-TRIM34B2RNG4 842 aa19.48■□□□□ 0.71
SMC4-204ENST00000462787 PNISRQ8TF01 805 aaKnown RBP19.48■□□□□ 0.71
SMC4-204ENST00000462787 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
SMC4-204ENST00000462787 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
SMC4-204ENST00000462787 REC8O95072 547 aa19.46■□□□□ 0.71
SMC4-204ENST00000462787 GOLGA6L1Q8N7Z2 621 aa19.46■□□□□ 0.71
SMC4-204ENST00000462787 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
SMC4-204ENST00000462787 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
SMC4-204ENST00000462787 NOL8Q76FK4 1167 aaKnown RBP19.46■□□□□ 0.71
SMC4-204ENST00000462787 C14orf37Q86TY3 774 aa19.45■□□□□ 0.7
SMC4-204ENST00000462787 DIAPH3Q9NSV4 1193 aa19.44■□□□□ 0.7
SMC4-204ENST00000462787 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
SMC4-204ENST00000462787 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
SMC4-204ENST00000462787 CARMIL2Q6F5E8 1435 aa19.43■□□□□ 0.7
SMC4-204ENST00000462787 ESPNB1AK53 854 aa19.43■□□□□ 0.7
SMC4-204ENST00000462787 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
SMC4-204ENST00000462787 MCTP1Q6DN14 999 aa19.43■□□□□ 0.7
SMC4-204ENST00000462787 CCDC184Q52MB2 194 aa19.42■□□□□ 0.7
SMC4-204ENST00000462787 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
SMC4-204ENST00000462787 HMGN5P82970 282 aaKnown RBP19.41■□□□□ 0.7
SMC4-204ENST00000462787 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
SMC4-204ENST00000462787 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
SMC4-204ENST00000462787 ATAD2BQ9ULI0 1458 aa19.4■□□□□ 0.7
SMC4-204ENST00000462787 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
SMC4-204ENST00000462787 PANK1Q8TE04 598 aa19.39■□□□□ 0.7
SMC4-204ENST00000462787 GPATCH3Q96I76 525 aa19.39■□□□□ 0.7
SMC4-204ENST00000462787 GOLGA6L19H0YKK7 550 aa19.39■□□□□ 0.69
SMC4-204ENST00000462787 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
SMC4-204ENST00000462787 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMC4-204ENST00000462787 MCM4P33991 863 aa19.39■□□□□ 0.69
SMC4-204ENST00000462787 IGF1RP08069 1367 aa19.38■□□□□ 0.69
SMC4-204ENST00000462787 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
SMC4-204ENST00000462787 RUNDC1Q96C34 613 aa19.38■□□□□ 0.69
SMC4-204ENST00000462787 TPM3P06753 285 aa19.37■□□□□ 0.69
SMC4-204ENST00000462787 GNL2Q13823 731 aaKnown RBP19.37■□□□□ 0.69
SMC4-204ENST00000462787 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
SMC4-204ENST00000462787 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
SMC4-204ENST00000462787 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
SMC4-204ENST00000462787 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
SMC4-204ENST00000462787 MBD3O95983 291 aa19.36■□□□□ 0.69
SMC4-204ENST00000462787 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.692e-9■□□□□ 8.7
SMC4-204ENST00000462787 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
SMC4-204ENST00000462787 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
SMC4-204ENST00000462787 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
SMC4-204ENST00000462787 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
SMC4-204ENST00000462787 GPS2Q13227 327 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms