RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 ITGAEP38570 1179 aa18.5■□□□□ 0.55
PHF20-208ENST00000461405 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
PHF20-208ENST00000461405 MLECQ14165 292 aa18.49■□□□□ 0.55
PHF20-208ENST00000461405 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
PHF20-208ENST00000461405 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
PHF20-208ENST00000461405 ANKRD50Q9ULJ7 1429 aa18.47■□□□□ 0.55
PHF20-208ENST00000461405 MROH2AA6NES4 1674 aa18.47■□□□□ 0.55
PHF20-208ENST00000461405 UNC13BO14795 1591 aa18.47■□□□□ 0.55
PHF20-208ENST00000461405 PTPRMP28827 1452 aa18.46■□□□□ 0.54
PHF20-208ENST00000461405 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
PHF20-208ENST00000461405 ZC3H13Q5T200 1668 aaKnown RBP18.45■□□□□ 0.54
PHF20-208ENST00000461405 NAIPQ13075 1403 aa18.45■□□□□ 0.54
PHF20-208ENST00000461405 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
PHF20-208ENST00000461405 CEP152O94986 1710 aa18.44■□□□□ 0.54
PHF20-208ENST00000461405 HFM1A2PYH4 1435 aa18.44■□□□□ 0.54
PHF20-208ENST00000461405 KIF3BO15066 747 aa18.44■□□□□ 0.54
PHF20-208ENST00000461405 C3P01024 1663 aa18.44■□□□□ 0.54
PHF20-208ENST00000461405 ABCC3O15438 1527 aa18.44■□□□□ 0.54
PHF20-208ENST00000461405 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
PHF20-208ENST00000461405 GGT6Q6P531 493 aa18.4■□□□□ 0.54
PHF20-208ENST00000461405 CAMSAP1Q5T5Y3 1602 aa18.4■□□□□ 0.54
PHF20-208ENST00000461405 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
PHF20-208ENST00000461405 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
PHF20-208ENST00000461405 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
PHF20-208ENST00000461405 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
PHF20-208ENST00000461405 TET3O43151 1660 aa18.33■□□□□ 0.52
PHF20-208ENST00000461405 PZPP20742 1482 aa18.33■□□□□ 0.52
PHF20-208ENST00000461405 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
PHF20-208ENST00000461405 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
PHF20-208ENST00000461405 PREX1Q8TCU6 1659 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHF20-208ENST00000461405 NPATQ14207 1427 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 ARHGAP31Q2M1Z3 1444 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 KANK1Q14678 1352 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 E9PCH4 1651 aa18.28■□□□□ 0.52
PHF20-208ENST00000461405 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.52
PHF20-208ENST00000461405 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.52
PHF20-208ENST00000461405 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.52
PHF20-208ENST00000461405 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
PHF20-208ENST00000461405 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
PHF20-208ENST00000461405 NUP155O75694 1391 aa18.24■□□□□ 0.51
PHF20-208ENST00000461405 RAB3GAP2Q9H2M9 1393 aa18.24■□□□□ 0.51
PHF20-208ENST00000461405 ZNF142P52746 1687 aaPredicted RBP18.24■□□□□ 0.51
PHF20-208ENST00000461405 SYNMO15061 1565 aa18.23■□□□□ 0.51
PHF20-208ENST00000461405 LMTK3Q96Q04 1460 aa18.23■□□□□ 0.51
PHF20-208ENST00000461405 RPRD2Q5VT52 1461 aaKnown RBP18.21■□□□□ 0.51
PHF20-208ENST00000461405 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
PHF20-208ENST00000461405 NOS1P29475 1434 aa18.19■□□□□ 0.5
PHF20-208ENST00000461405 TNRQ92752 1358 aa18.18■□□□□ 0.5
PHF20-208ENST00000461405 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
PHF20-208ENST00000461405 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
PHF20-208ENST00000461405 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
PHF20-208ENST00000461405 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
PHF20-208ENST00000461405 CFAP65Q6ZU64 1925 aaKnown RBP18.16■□□□□ 0.5
PHF20-208ENST00000461405 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
PHF20-208ENST00000461405 UGGT1Q9NYU2 1555 aa18.14■□□□□ 0.49
PHF20-208ENST00000461405 SETD1BQ9UPS6 1966 aaKnown RBP18.14■□□□□ 0.49
PHF20-208ENST00000461405 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
PHF20-208ENST00000461405 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
PHF20-208ENST00000461405 TRIM52Q96A61 297 aa18.12■□□□□ 0.49
PHF20-208ENST00000461405 TRPM2O94759 1503 aa18.12■□□□□ 0.49
PHF20-208ENST00000461405 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
PHF20-208ENST00000461405 PTPRTO14522 1441 aa18.11■□□□□ 0.49
PHF20-208ENST00000461405 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
PHF20-208ENST00000461405 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
PHF20-208ENST00000461405 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
PHF20-208ENST00000461405 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
PHF20-208ENST00000461405 HRCP23327 699 aa18.08■□□□□ 0.48
PHF20-208ENST00000461405 PKD2Q13563 968 aa18.06■□□□□ 0.48
PHF20-208ENST00000461405 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
PHF20-208ENST00000461405 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
PHF20-208ENST00000461405 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
PHF20-208ENST00000461405 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
PHF20-208ENST00000461405 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
PHF20-208ENST00000461405 HSPA2P54652 639 aa18.04■□□□□ 0.48
PHF20-208ENST00000461405 MPHOSPH9Q99550 1183 aa18.04■□□□□ 0.48
PHF20-208ENST00000461405 FOXD1Q16676 465 aa18.03■□□□□ 0.48
PHF20-208ENST00000461405 ARHGAP23Q9P227 1491 aa18.01■□□□□ 0.47
PHF20-208ENST00000461405 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
PHF20-208ENST00000461405 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
PHF20-208ENST00000461405 SLIT1O75093 1534 aa18■□□□□ 0.47
PHF20-208ENST00000461405 IDI1Q13907 227 aa18■□□□□ 0.47
PHF20-208ENST00000461405 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
PHF20-208ENST00000461405 KIF1BO60333 1816 aa17.96■□□□□ 0.47
PHF20-208ENST00000461405 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
PHF20-208ENST00000461405 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
PHF20-208ENST00000461405 ANKRD30BQ9BXX2 1392 aa17.94■□□□□ 0.46
PHF20-208ENST00000461405 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
PHF20-208ENST00000461405 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
PHF20-208ENST00000461405 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
PHF20-208ENST00000461405 NEXMIFQ5QGS0 1516 aa17.92■□□□□ 0.46
PHF20-208ENST00000461405 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
PHF20-208ENST00000461405 MED14O60244 1454 aa17.9■□□□□ 0.46
PHF20-208ENST00000461405 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
PHF20-208ENST00000461405 IFT172Q9UG01 1749 aa17.9■□□□□ 0.46
PHF20-208ENST00000461405 THEMISQ8N1K5 641 aaPredicted RBP17.9■□□□□ 0.46
PHF20-208ENST00000461405 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
PHF20-208ENST00000461405 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms