RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
PHF20-208ENST00000461405 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
PHF20-208ENST00000461405 ABCC9O60706 1549 aa25.24■■□□□ 1.63
PHF20-208ENST00000461405 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
PHF20-208ENST00000461405 NACADO15069 1562 aa24.42■■□□□ 1.5
PHF20-208ENST00000461405 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
PHF20-208ENST00000461405 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
PHF20-208ENST00000461405 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
PHF20-208ENST00000461405 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
PHF20-208ENST00000461405 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
PHF20-208ENST00000461405 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
PHF20-208ENST00000461405 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PHF20-208ENST00000461405 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
PHF20-208ENST00000461405 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
PHF20-208ENST00000461405 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
PHF20-208ENST00000461405 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
PHF20-208ENST00000461405 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
PHF20-208ENST00000461405 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
PHF20-208ENST00000461405 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
PHF20-208ENST00000461405 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
PHF20-208ENST00000461405 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
PHF20-208ENST00000461405 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
PHF20-208ENST00000461405 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
PHF20-208ENST00000461405 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
PHF20-208ENST00000461405 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
PHF20-208ENST00000461405 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
PHF20-208ENST00000461405 HMGXB3Q12766 1538 aa22.49■■□□□ 1.19
PHF20-208ENST00000461405 WIZO95785 1651 aa22.47■■□□□ 1.19
PHF20-208ENST00000461405 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
PHF20-208ENST00000461405 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
PHF20-208ENST00000461405 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
PHF20-208ENST00000461405 NESP48681 1621 aa21.95■■□□□ 1.1
PHF20-208ENST00000461405 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
PHF20-208ENST00000461405 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
PHF20-208ENST00000461405 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
PHF20-208ENST00000461405 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
PHF20-208ENST00000461405 CFTRP13569 1480 aa21.8■■□□□ 1.08
PHF20-208ENST00000461405 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
PHF20-208ENST00000461405 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PHF20-208ENST00000461405 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
PHF20-208ENST00000461405 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
PHF20-208ENST00000461405 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
PHF20-208ENST00000461405 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
PHF20-208ENST00000461405 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
PHF20-208ENST00000461405 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
PHF20-208ENST00000461405 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
PHF20-208ENST00000461405 WDR62O43379 1518 aa21.48■■□□□ 1.03
PHF20-208ENST00000461405 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
PHF20-208ENST00000461405 CUX2O14529 1486 aa21.43■■□□□ 1.02
PHF20-208ENST00000461405 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
PHF20-208ENST00000461405 TOPBP1Q92547 1522 aa21.33■■□□□ 1
PHF20-208ENST00000461405 CUX1P39880 1505 aa21.28■■□□□ 1
PHF20-208ENST00000461405 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
PHF20-208ENST00000461405 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PHF20-208ENST00000461405 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
PHF20-208ENST00000461405 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
PHF20-208ENST00000461405 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
PHF20-208ENST00000461405 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
PHF20-208ENST00000461405 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
PHF20-208ENST00000461405 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
PHF20-208ENST00000461405 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
PHF20-208ENST00000461405 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
PHF20-208ENST00000461405 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
PHF20-208ENST00000461405 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PHF20-208ENST00000461405 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
PHF20-208ENST00000461405 SOGA1O94964 1423 aa20.99■□□□□ 0.95
PHF20-208ENST00000461405 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
PHF20-208ENST00000461405 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
PHF20-208ENST00000461405 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.932e-7■■■□□ 16.8
PHF20-208ENST00000461405 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
PHF20-208ENST00000461405 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
PHF20-208ENST00000461405 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
PHF20-208ENST00000461405 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
PHF20-208ENST00000461405 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
PHF20-208ENST00000461405 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
PHF20-208ENST00000461405 CHD1O14646 1710 aa20.7■□□□□ 0.9
PHF20-208ENST00000461405 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
PHF20-208ENST00000461405 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
PHF20-208ENST00000461405 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
PHF20-208ENST00000461405 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
PHF20-208ENST00000461405 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
PHF20-208ENST00000461405 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
PHF20-208ENST00000461405 CUL7Q14999 1698 aa20.58■□□□□ 0.88
PHF20-208ENST00000461405 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
PHF20-208ENST00000461405 IGF1RP08069 1367 aa20.55■□□□□ 0.88
PHF20-208ENST00000461405 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
PHF20-208ENST00000461405 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
PHF20-208ENST00000461405 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
PHF20-208ENST00000461405 FBLN2P98095 1184 aa20.46■□□□□ 0.87
PHF20-208ENST00000461405 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
PHF20-208ENST00000461405 NUP160Q12769 1436 aa20.44■□□□□ 0.86
PHF20-208ENST00000461405 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
PHF20-208ENST00000461405 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
PHF20-208ENST00000461405 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
PHF20-208ENST00000461405 EEA1Q15075 1411 aa20.41■□□□□ 0.86
PHF20-208ENST00000461405 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
PHF20-208ENST00000461405 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
PHF20-208ENST00000461405 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
PHF20-208ENST00000461405 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
PHF20-208ENST00000461405 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms