RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 PZPP20742 1482 aa21.99■■□□□ 1.11
SCAMP4-206ENST00000460767 GGT6Q6P531 493 aa21.99■■□□□ 1.11
SCAMP4-206ENST00000460767 KDM5DQ9BY66 1539 aa21.99■■□□□ 1.11
SCAMP4-206ENST00000460767 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
SCAMP4-206ENST00000460767 DEPDC5O75140 1603 aa21.97■■□□□ 1.11
SCAMP4-206ENST00000460767 VWDEQ8N2E2 1590 aa21.96■■□□□ 1.11
SCAMP4-206ENST00000460767 DHX29Q7Z478 1369 aaKnown RBP21.96■■□□□ 1.11
SCAMP4-206ENST00000460767 MED14O60244 1454 aa21.96■■□□□ 1.11
SCAMP4-206ENST00000460767 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
SCAMP4-206ENST00000460767 TOM1O60784 492 aa21.94■■□□□ 1.1
SCAMP4-206ENST00000460767 TNRQ92752 1358 aa21.94■■□□□ 1.1
SCAMP4-206ENST00000460767 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
SCAMP4-206ENST00000460767 NLRP1Q9C000 1473 aa21.93■■□□□ 1.1
SCAMP4-206ENST00000460767 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
SCAMP4-206ENST00000460767 HSPA1LP34931 641 aa21.92■■□□□ 1.1
SCAMP4-206ENST00000460767 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.09
SCAMP4-206ENST00000460767 SYNMO15061 1565 aa21.88■■□□□ 1.09
SCAMP4-206ENST00000460767 UGGT1Q9NYU2 1555 aa21.87■■□□□ 1.09
SCAMP4-206ENST00000460767 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
SCAMP4-206ENST00000460767 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
SCAMP4-206ENST00000460767 RNF17Q9BXT8 1623 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-206ENST00000460767 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
SCAMP4-206ENST00000460767 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
SCAMP4-206ENST00000460767 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-206ENST00000460767 ANKLE2Q86XL3 938 aa21.84■■□□□ 1.09
SCAMP4-206ENST00000460767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.83■■□□□ 1.089e-7■■■□□ 16.5
SCAMP4-206ENST00000460767 ARHGEF5Q12774 1597 aa21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 PIP4K2BP78356 416 aa21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 RSPH4AQ5TD94 716 aa21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 THEMISQ8N1K5 641 aaPredicted RBP21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
SCAMP4-206ENST00000460767 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
SCAMP4-206ENST00000460767 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
SCAMP4-206ENST00000460767 STRCP1A6NGW2 1772 aa21.8■■□□□ 1.08
SCAMP4-206ENST00000460767 KIF3BO15066 747 aa21.8■■□□□ 1.08
SCAMP4-206ENST00000460767 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
SCAMP4-206ENST00000460767 WASHC2CQ9Y4E1 1318 aa21.78■■□□□ 1.08
SCAMP4-206ENST00000460767 EIF2AK4Q9P2K8 1649 aaKnown RBP21.77■■□□□ 1.08
SCAMP4-206ENST00000460767 MAST1Q9Y2H9 1570 aa21.75■■□□□ 1.07
SCAMP4-206ENST00000460767 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
SCAMP4-206ENST00000460767 ABCC3O15438 1527 aa21.75■■□□□ 1.07
SCAMP4-206ENST00000460767 ERVK-7P63135 1459 aa21.72■■□□□ 1.07
SCAMP4-206ENST00000460767 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
SCAMP4-206ENST00000460767 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
SCAMP4-206ENST00000460767 MROH1Q8NDA8 1641 aa21.71■■□□□ 1.07
SCAMP4-206ENST00000460767 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
SCAMP4-206ENST00000460767 SLIT1O75093 1534 aa21.68■■□□□ 1.06
SCAMP4-206ENST00000460767 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
SCAMP4-206ENST00000460767 SCAF11Q99590 1463 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-206ENST00000460767 XIRP1Q702N8 1843 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-206ENST00000460767 CEP152O94986 1710 aa21.63■■□□□ 1.05
SCAMP4-206ENST00000460767 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
SCAMP4-206ENST00000460767 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
SCAMP4-206ENST00000460767 ARHGAP31Q2M1Z3 1444 aa21.61■■□□□ 1.05
SCAMP4-206ENST00000460767 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-206ENST00000460767 KDM5AP29375 1690 aaKnown RBP21.6■■□□□ 1.05
SCAMP4-206ENST00000460767 LRRC9Q6ZRR7 1453 aa21.59■■□□□ 1.05
SCAMP4-206ENST00000460767 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
SCAMP4-206ENST00000460767 DUOX2Q9NRD8 1548 aa21.57■■□□□ 1.04
SCAMP4-206ENST00000460767 RGS17Q9UGC6 210 aaPredicted RBP21.56■■□□□ 1.04
SCAMP4-206ENST00000460767 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
SCAMP4-206ENST00000460767 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
SCAMP4-206ENST00000460767 LTKP29376 864 aa21.5■■□□□ 1.03
SCAMP4-206ENST00000460767 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-206ENST00000460767 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
SCAMP4-206ENST00000460767 TMEM2Q9UHN6 1383 aa21.48■■□□□ 1.03
SCAMP4-206ENST00000460767 MYOM3Q5VTT5 1437 aa21.48■■□□□ 1.03
SCAMP4-206ENST00000460767 NWD1Q149M9 1564 aa21.48■■□□□ 1.03
SCAMP4-206ENST00000460767 CFAP65Q6ZU64 1925 aaKnown RBP21.47■■□□□ 1.03
SCAMP4-206ENST00000460767 TXNDC2Q86VQ3 553 aa21.47■■□□□ 1.03
SCAMP4-206ENST00000460767 ROBO1Q9Y6N7 1651 aa21.47■■□□□ 1.03
SCAMP4-206ENST00000460767 TET3O43151 1660 aa21.46■■□□□ 1.03
SCAMP4-206ENST00000460767 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.03
SCAMP4-206ENST00000460767 EFCAB6Q5THR3 1501 aa21.45■■□□□ 1.02
SCAMP4-206ENST00000460767 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
SCAMP4-206ENST00000460767 EID1Q9Y6B2 187 aa21.45■■□□□ 1.02
SCAMP4-206ENST00000460767 TMEM94Q12767 1356 aa21.43■■□□□ 1.02
SCAMP4-206ENST00000460767 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
SCAMP4-206ENST00000460767 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
SCAMP4-206ENST00000460767 KCNA6P17658 529 aa21.39■■□□□ 1.01
SCAMP4-206ENST00000460767 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
SCAMP4-206ENST00000460767 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
SCAMP4-206ENST00000460767 ABCC5O15440 1437 aa21.36■■□□□ 1.01
SCAMP4-206ENST00000460767 NOS1P29475 1434 aa21.36■■□□□ 1.01
SCAMP4-206ENST00000460767 KANK1Q14678 1352 aa21.35■■□□□ 1.01
SCAMP4-206ENST00000460767 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
SCAMP4-206ENST00000460767 PTPN23Q9H3S7 1636 aa21.33■■□□□ 1
SCAMP4-206ENST00000460767 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
SCAMP4-206ENST00000460767 COL16A1Q07092 1604 aaPredicted RBP21.31■■□□□ 1
SCAMP4-206ENST00000460767 JCADQ9P266 1359 aa21.31■■□□□ 1
SCAMP4-206ENST00000460767 DAPK1P53355 1430 aa21.3■■□□□ 1
SCAMP4-206ENST00000460767 IDI1Q13907 227 aa21.3■■□□□ 1
SCAMP4-206ENST00000460767 MSH6P52701 1360 aa21.3■■□□□ 1
SCAMP4-206ENST00000460767 CHD2O14647 1828 aaKnown RBP21.29■■□□□ 1
SCAMP4-206ENST00000460767 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
SCAMP4-206ENST00000460767 NCOA3Q9Y6Q9 1424 aa21.29■■□□□ 1
SCAMP4-206ENST00000460767 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
SCAMP4-206ENST00000460767 APLP2Q06481 763 aa21.28■■□□□ 1
SCAMP4-206ENST00000460767 PROSER2Q86WR7 435 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms