RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 NAIPQ13075 1403 aa18.62■□□□□ 0.57
SHANK2-212ENST00000458632 ERBINQ96RT1 1412 aa18.6■□□□□ 0.57
SHANK2-212ENST00000458632 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
SHANK2-212ENST00000458632 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
SHANK2-212ENST00000458632 PTPRMP28827 1452 aa18.58■□□□□ 0.57
SHANK2-212ENST00000458632 NUP155O75694 1391 aa18.57■□□□□ 0.56
SHANK2-212ENST00000458632 BCORL1Q5H9F3 1711 aa18.56■□□□□ 0.56
SHANK2-212ENST00000458632 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
SHANK2-212ENST00000458632 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
SHANK2-212ENST00000458632 KANK1Q14678 1352 aa18.55■□□□□ 0.56
SHANK2-212ENST00000458632 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
SHANK2-212ENST00000458632 HRCP23327 699 aa18.55■□□□□ 0.56
SHANK2-212ENST00000458632 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
SHANK2-212ENST00000458632 CNTLNQ9NXG0 1405 aa18.54■□□□□ 0.56
SHANK2-212ENST00000458632 CROCC2H7BZ55 1655 aa18.5■□□□□ 0.55
SHANK2-212ENST00000458632 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
SHANK2-212ENST00000458632 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
SHANK2-212ENST00000458632 MADDQ8WXG6 1647 aa18.49■□□□□ 0.55
SHANK2-212ENST00000458632 RAB3GAP2Q9H2M9 1393 aa18.47■□□□□ 0.55
SHANK2-212ENST00000458632 PKD2Q13563 968 aa18.47■□□□□ 0.55
SHANK2-212ENST00000458632 IDI1Q13907 227 aa18.45■□□□□ 0.54
SHANK2-212ENST00000458632 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
SHANK2-212ENST00000458632 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
SHANK2-212ENST00000458632 FOXD1Q16676 465 aa18.44■□□□□ 0.54
SHANK2-212ENST00000458632 HSPA2P54652 639 aa18.43■□□□□ 0.54
SHANK2-212ENST00000458632 ABCC3O15438 1527 aa18.43■□□□□ 0.54
SHANK2-212ENST00000458632 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
SHANK2-212ENST00000458632 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
SHANK2-212ENST00000458632 ARHGAP31Q2M1Z3 1444 aa18.42■□□□□ 0.54
SHANK2-212ENST00000458632 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
SHANK2-212ENST00000458632 NPATQ14207 1427 aa18.4■□□□□ 0.54
SHANK2-212ENST00000458632 RIMS1Q86UR5 1692 aaKnown RBP18.4■□□□□ 0.54
SHANK2-212ENST00000458632 TNRQ92752 1358 aa18.4■□□□□ 0.54
SHANK2-212ENST00000458632 VWDEQ8N2E2 1590 aa18.39■□□□□ 0.53
SHANK2-212ENST00000458632 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
SHANK2-212ENST00000458632 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
SHANK2-212ENST00000458632 PZPP20742 1482 aa18.38■□□□□ 0.53
SHANK2-212ENST00000458632 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
SHANK2-212ENST00000458632 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-212ENST00000458632 THEMISQ8N1K5 641 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-212ENST00000458632 CLTCQ00610 1675 aaKnown RBP18.35■□□□□ 0.53
SHANK2-212ENST00000458632 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
SHANK2-212ENST00000458632 FER1L4A9Z1Z3 1794 aa18.34■□□□□ 0.53
SHANK2-212ENST00000458632 NOS1P29475 1434 aa18.33■□□□□ 0.53
SHANK2-212ENST00000458632 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
SHANK2-212ENST00000458632 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
SHANK2-212ENST00000458632 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
SHANK2-212ENST00000458632 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
SHANK2-212ENST00000458632 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
SHANK2-212ENST00000458632 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
SHANK2-212ENST00000458632 C3P01024 1663 aa18.3■□□□□ 0.52
SHANK2-212ENST00000458632 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
SHANK2-212ENST00000458632 UNC13BO14795 1591 aa18.29■□□□□ 0.52
SHANK2-212ENST00000458632 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
SHANK2-212ENST00000458632 PTPRTO14522 1441 aa18.28■□□□□ 0.52
SHANK2-212ENST00000458632 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
SHANK2-212ENST00000458632 LMTK3Q96Q04 1460 aa18.27■□□□□ 0.52
SHANK2-212ENST00000458632 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
SHANK2-212ENST00000458632 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
SHANK2-212ENST00000458632 LTKP29376 864 aa18.26■□□□□ 0.51
SHANK2-212ENST00000458632 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
SHANK2-212ENST00000458632 SPATA31D1Q6ZQQ2 1576 aa18.24■□□□□ 0.51
SHANK2-212ENST00000458632 GCC2Q8IWJ2 1684 aa18.24■□□□□ 0.51
SHANK2-212ENST00000458632 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
SHANK2-212ENST00000458632 IQGAP3Q86VI3 1631 aa18.23■□□□□ 0.51
SHANK2-212ENST00000458632 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
SHANK2-212ENST00000458632 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
SHANK2-212ENST00000458632 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
SHANK2-212ENST00000458632 CEP152O94986 1710 aa18.23■□□□□ 0.51
SHANK2-212ENST00000458632 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
SHANK2-212ENST00000458632 RGL3Q3MIN7 710 aa18.22■□□□□ 0.51
SHANK2-212ENST00000458632 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
SHANK2-212ENST00000458632 HDGFP51858 240 aaKnown RBP18.21■□□□□ 0.51
SHANK2-212ENST00000458632 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
SHANK2-212ENST00000458632 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
SHANK2-212ENST00000458632 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
SHANK2-212ENST00000458632 EID1Q9Y6B2 187 aa18.2■□□□□ 0.5
SHANK2-212ENST00000458632 TET3O43151 1660 aa18.19■□□□□ 0.5
SHANK2-212ENST00000458632 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
SHANK2-212ENST00000458632 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
SHANK2-212ENST00000458632 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
SHANK2-212ENST00000458632 E9PCH4 1651 aa18.16■□□□□ 0.5
SHANK2-212ENST00000458632 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHANK2-212ENST00000458632 SYNMO15061 1565 aa18.15■□□□□ 0.5
SHANK2-212ENST00000458632 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
SHANK2-212ENST00000458632 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
SHANK2-212ENST00000458632 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
SHANK2-212ENST00000458632 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
SHANK2-212ENST00000458632 BCANQ96GW7 911 aa18.12■□□□□ 0.49
SHANK2-212ENST00000458632 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
SHANK2-212ENST00000458632 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-212ENST00000458632 CCDC144AA2RUR9 1427 aa18.11■□□□□ 0.49
SHANK2-212ENST00000458632 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-212ENST00000458632 PPP1R15AO75807 674 aaPredicted RBP18.1■□□□□ 0.49
SHANK2-212ENST00000458632 SLC26A8Q96RN1 970 aa18.1■□□□□ 0.49
SHANK2-212ENST00000458632 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
SHANK2-212ENST00000458632 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.48
SHANK2-212ENST00000458632 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
SHANK2-212ENST00000458632 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
SHANK2-212ENST00000458632 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms