RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■■■ 62.8
SHANK2-212ENST00000458632 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.344e-10■■■■■ 54
SHANK2-212ENST00000458632 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.09□□□□□ -0.799e-7■■■■■ 39.8
SHANK2-212ENST00000458632 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.686e-7■■■■■ 36.8
SHANK2-212ENST00000458632 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.56e-7■■■■■ 36.2
SHANK2-212ENST00000458632 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.38□□□□□ -0.597e-7■■■■■ 31.3
SHANK2-212ENST00000458632 PTBP1P26599 531 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■■□ 21.9
SHANK2-212ENST00000458632 BCCIPQ9P287 314 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■□□ 19.1
SHANK2-212ENST00000458632 HNRNPKP61978 463 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■□□ 17.4
SHANK2-212ENST00000458632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.49□□□□□ -0.572e-8■■■□□ 17.1
SHANK2-212ENST00000458632 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.241e-7■■■□□ 15.4
SHANK2-212ENST00000458632 PPIGQ13427 754 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■□□ 15.1
SHANK2-212ENST00000458632 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■□□□ 13.8
SHANK2-212ENST00000458632 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■□□□ 12.9
SHANK2-212ENST00000458632 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.21e-8■■□□□ 12.8
SHANK2-212ENST00000458632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■□□□□ 10.6
SHANK2-212ENST00000458632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.253e-8■□□□□ 10.1
SHANK2-212ENST00000458632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■□□□□ 10
SHANK2-212ENST00000458632 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■□□□□ 8.7
Retrieved 19 of 19 RNA–protein pairs in 6.4 ms