RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
SHANK2-212ENST00000458632 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
SHANK2-212ENST00000458632 ABCC9O60706 1549 aa25.42■■□□□ 1.66
SHANK2-212ENST00000458632 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
SHANK2-212ENST00000458632 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
SHANK2-212ENST00000458632 NACADO15069 1562 aa24.41■■□□□ 1.5
SHANK2-212ENST00000458632 RB1CC1Q8TDY2 1594 aa24.34■■□□□ 1.49
SHANK2-212ENST00000458632 MYO15BQ96JP2 1530 aa24.33■■□□□ 1.49
SHANK2-212ENST00000458632 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
SHANK2-212ENST00000458632 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
SHANK2-212ENST00000458632 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
SHANK2-212ENST00000458632 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
SHANK2-212ENST00000458632 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
SHANK2-212ENST00000458632 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
SHANK2-212ENST00000458632 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
SHANK2-212ENST00000458632 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
SHANK2-212ENST00000458632 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
SHANK2-212ENST00000458632 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
SHANK2-212ENST00000458632 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
SHANK2-212ENST00000458632 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
SHANK2-212ENST00000458632 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
SHANK2-212ENST00000458632 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
SHANK2-212ENST00000458632 ATAD2BQ9ULI0 1458 aa22.7■■□□□ 1.22
SHANK2-212ENST00000458632 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SHANK2-212ENST00000458632 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
SHANK2-212ENST00000458632 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
SHANK2-212ENST00000458632 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
SHANK2-212ENST00000458632 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
SHANK2-212ENST00000458632 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
SHANK2-212ENST00000458632 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
SHANK2-212ENST00000458632 WIZO95785 1651 aa22.4■■□□□ 1.18
SHANK2-212ENST00000458632 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
SHANK2-212ENST00000458632 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
SHANK2-212ENST00000458632 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
SHANK2-212ENST00000458632 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
SHANK2-212ENST00000458632 NESP48681 1621 aa22.06■■□□□ 1.12
SHANK2-212ENST00000458632 CFTRP13569 1480 aa21.91■■□□□ 1.1
SHANK2-212ENST00000458632 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SHANK2-212ENST00000458632 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
SHANK2-212ENST00000458632 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
SHANK2-212ENST00000458632 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SHANK2-212ENST00000458632 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
SHANK2-212ENST00000458632 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
SHANK2-212ENST00000458632 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
SHANK2-212ENST00000458632 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
SHANK2-212ENST00000458632 CUX2O14529 1486 aa21.45■■□□□ 1.03
SHANK2-212ENST00000458632 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
SHANK2-212ENST00000458632 WDR62O43379 1518 aa21.39■■□□□ 1.01
SHANK2-212ENST00000458632 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
SHANK2-212ENST00000458632 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
SHANK2-212ENST00000458632 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
SHANK2-212ENST00000458632 CUX1P39880 1505 aa21.29■■□□□ 1
SHANK2-212ENST00000458632 SOGA1O94964 1423 aa21.29■■□□□ 1
SHANK2-212ENST00000458632 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
SHANK2-212ENST00000458632 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SHANK2-212ENST00000458632 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
SHANK2-212ENST00000458632 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
SHANK2-212ENST00000458632 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
SHANK2-212ENST00000458632 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
SHANK2-212ENST00000458632 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
SHANK2-212ENST00000458632 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
SHANK2-212ENST00000458632 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
SHANK2-212ENST00000458632 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.98
SHANK2-212ENST00000458632 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
SHANK2-212ENST00000458632 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
SHANK2-212ENST00000458632 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
SHANK2-212ENST00000458632 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
SHANK2-212ENST00000458632 FBLN2P98095 1184 aa20.97■□□□□ 0.95
SHANK2-212ENST00000458632 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
SHANK2-212ENST00000458632 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
SHANK2-212ENST00000458632 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
SHANK2-212ENST00000458632 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
SHANK2-212ENST00000458632 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
SHANK2-212ENST00000458632 IGF1RP08069 1367 aa20.9■□□□□ 0.94
SHANK2-212ENST00000458632 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
SHANK2-212ENST00000458632 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
SHANK2-212ENST00000458632 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
SHANK2-212ENST00000458632 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SHANK2-212ENST00000458632 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
SHANK2-212ENST00000458632 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
SHANK2-212ENST00000458632 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
SHANK2-212ENST00000458632 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
SHANK2-212ENST00000458632 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
SHANK2-212ENST00000458632 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SHANK2-212ENST00000458632 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
SHANK2-212ENST00000458632 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
SHANK2-212ENST00000458632 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
SHANK2-212ENST00000458632 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
SHANK2-212ENST00000458632 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
SHANK2-212ENST00000458632 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
SHANK2-212ENST00000458632 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
SHANK2-212ENST00000458632 EEA1Q15075 1411 aa20.53■□□□□ 0.88
SHANK2-212ENST00000458632 NUP160Q12769 1436 aa20.51■□□□□ 0.87
SHANK2-212ENST00000458632 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
SHANK2-212ENST00000458632 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
SHANK2-212ENST00000458632 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
SHANK2-212ENST00000458632 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
SHANK2-212ENST00000458632 CHD1O14646 1710 aa20.45■□□□□ 0.86
SHANK2-212ENST00000458632 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
SHANK2-212ENST00000458632 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms