RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, human

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-212	ENST00000458632	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.94	□□□□□ -0.34	4e-10	■■■■■ 54
SHANK2-212	ENST00000458632	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	1e-8	■■□□□ 12.8
SHANK2-212	ENST00000458632	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.49	□□□□□ -0.57	2e-8	■■■□□ 17.1
SHANK2-212	ENST00000458632	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	16.63	■□□□□ 0.25	3e-8	■□□□□ 10.1
SHANK2-212	ENST00000458632	MATR3	P43243	847 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	1e-7	■■■□□ 15.4
SHANK2-212	ENST00000458632	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.21	□□□□□ -0.45	2e-7	■■■■■ 62.8
SHANK2-212	ENST00000458632	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.75	■□□□□ 0.59	2e-7	■□□□□ 10.6
SHANK2-212	ENST00000458632	PPIG	Q13427	754 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	3e-7	■■■□□ 15.1
SHANK2-212	ENST00000458632	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.9	□□□□□ -0.5	6e-7	■■■■■ 36.2
SHANK2-212	ENST00000458632	HNRNPM	P52272	730 aa	Known RBP eCLIP	19.29	■□□□□ 0.68	6e-7	■■■■■ 36.8
SHANK2-212	ENST00000458632	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	7e-7	■■■■■ 31.3
SHANK2-212	ENST00000458632	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.09	□□□□□ -0.79	9e-7	■■■■■ 39.8
SHANK2-212	ENST00000458632	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.3	□□□□□ -0.44	1e-6	■■■□□ 17.4
SHANK2-212	ENST00000458632	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.19	□□□□□ -0.46	1e-6	■■□□□ 12.9
SHANK2-212	ENST00000458632	PTBP1	P26599	531 aa	Known RBP eCLIP	9.9	□□□□□ -0.82	2e-6	■■■■□ 21.9
SHANK2-212	ENST00000458632	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.63	□□□□□ -0.39	2e-6	■■■□□ 19.1
SHANK2-212	ENST00000458632	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	2e-6	■■□□□ 13.8
SHANK2-212	ENST00000458632	FXR2	P51116	673 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	2e-6	■□□□□ 8.7
SHANK2-212	ENST00000458632	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	3e-6	■□□□□ 10

Retrieved 19 of 19 RNA–protein pairs in 4.2 ms