RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
PKP4-207ENST00000457109 CLTCQ00610 1675 aaKnown RBP13.75□□□□□ -0.21
PKP4-207ENST00000457109 ZNF335Q9H4Z2 1342 aaPredicted RBP13.75□□□□□ -0.21
PKP4-207ENST00000457109 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
PKP4-207ENST00000457109 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
PKP4-207ENST00000457109 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
PKP4-207ENST00000457109 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
PKP4-207ENST00000457109 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
PKP4-207ENST00000457109 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
PKP4-207ENST00000457109 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
PKP4-207ENST00000457109 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
PKP4-207ENST00000457109 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.21
PKP4-207ENST00000457109 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
PKP4-207ENST00000457109 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
PKP4-207ENST00000457109 PZPP20742 1482 aa13.7□□□□□ -0.22
PKP4-207ENST00000457109 TOM1O60784 492 aa13.7□□□□□ -0.22
PKP4-207ENST00000457109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.224e-8■■□□□ 11.9
PKP4-207ENST00000457109 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
PKP4-207ENST00000457109 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
PKP4-207ENST00000457109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.223e-7■■■■□ 24.5
PKP4-207ENST00000457109 TCOF1Q13428 1488 aaKnown RBP13.68□□□□□ -0.22
PKP4-207ENST00000457109 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
PKP4-207ENST00000457109 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
PKP4-207ENST00000457109 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
PKP4-207ENST00000457109 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
PKP4-207ENST00000457109 KANK1Q14678 1352 aa13.67□□□□□ -0.22
PKP4-207ENST00000457109 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
PKP4-207ENST00000457109 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
PKP4-207ENST00000457109 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
PKP4-207ENST00000457109 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
PKP4-207ENST00000457109 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
PKP4-207ENST00000457109 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
PKP4-207ENST00000457109 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
PKP4-207ENST00000457109 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
PKP4-207ENST00000457109 ANKRD30AQ9BXX3 1397 aa13.63□□□□□ -0.23
PKP4-207ENST00000457109 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
PKP4-207ENST00000457109 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
PKP4-207ENST00000457109 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
PKP4-207ENST00000457109 MAST1Q9Y2H9 1570 aa13.61□□□□□ -0.23
PKP4-207ENST00000457109 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
PKP4-207ENST00000457109 ABCC5O15440 1437 aa13.6□□□□□ -0.23
PKP4-207ENST00000457109 ERBINQ96RT1 1412 aa13.59□□□□□ -0.23
PKP4-207ENST00000457109 ABCC3O15438 1527 aa13.59□□□□□ -0.23
PKP4-207ENST00000457109 CPS1P31327 1500 aa13.59□□□□□ -0.23
PKP4-207ENST00000457109 BCANQ96GW7 911 aa13.58□□□□□ -0.24
PKP4-207ENST00000457109 DAPK1P53355 1430 aa13.57□□□□□ -0.24
PKP4-207ENST00000457109 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
PKP4-207ENST00000457109 ERVK-7P63135 1459 aa13.57□□□□□ -0.24
PKP4-207ENST00000457109 SOCS7O14512 581 aa13.56□□□□□ -0.24
PKP4-207ENST00000457109 HSPA1LP34931 641 aa13.56□□□□□ -0.24
PKP4-207ENST00000457109 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
PKP4-207ENST00000457109 EIF2AK4Q9P2K8 1649 aaKnown RBP13.56□□□□□ -0.24
PKP4-207ENST00000457109 MED14O60244 1454 aa13.55□□□□□ -0.24
PKP4-207ENST00000457109 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
PKP4-207ENST00000457109 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
PKP4-207ENST00000457109 ARHGAP31Q2M1Z3 1444 aa13.55□□□□□ -0.24
PKP4-207ENST00000457109 PTPN23Q9H3S7 1636 aa13.54□□□□□ -0.24
PKP4-207ENST00000457109 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
PKP4-207ENST00000457109 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
PKP4-207ENST00000457109 LTKP29376 864 aa13.53□□□□□ -0.24
PKP4-207ENST00000457109 IDI1Q13907 227 aa13.53□□□□□ -0.24
PKP4-207ENST00000457109 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
PKP4-207ENST00000457109 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.25
PKP4-207ENST00000457109 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
PKP4-207ENST00000457109 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
PKP4-207ENST00000457109 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
PKP4-207ENST00000457109 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
PKP4-207ENST00000457109 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
PKP4-207ENST00000457109 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
PKP4-207ENST00000457109 CHGAP10645 457 aaKnown RBP13.49□□□□□ -0.25
PKP4-207ENST00000457109 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
PKP4-207ENST00000457109 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
PKP4-207ENST00000457109 ITGAEP38570 1179 aa13.47□□□□□ -0.25
PKP4-207ENST00000457109 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
PKP4-207ENST00000457109 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
PKP4-207ENST00000457109 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
PKP4-207ENST00000457109 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
PKP4-207ENST00000457109 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
PKP4-207ENST00000457109 KCNA6P17658 529 aa13.46□□□□□ -0.25
PKP4-207ENST00000457109 IQGAP1P46940 1657 aa13.46□□□□□ -0.26
PKP4-207ENST00000457109 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
PKP4-207ENST00000457109 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
PKP4-207ENST00000457109 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
PKP4-207ENST00000457109 CEP152O94986 1710 aa13.44□□□□□ -0.26
PKP4-207ENST00000457109 SLIT1O75093 1534 aa13.44□□□□□ -0.26
PKP4-207ENST00000457109 EFCAB6Q5THR3 1501 aa13.43□□□□□ -0.26
PKP4-207ENST00000457109 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
PKP4-207ENST00000457109 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
PKP4-207ENST00000457109 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
PKP4-207ENST00000457109 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
PKP4-207ENST00000457109 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
PKP4-207ENST00000457109 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
PKP4-207ENST00000457109 NOS1P29475 1434 aa13.4□□□□□ -0.26
PKP4-207ENST00000457109 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
PKP4-207ENST00000457109 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
PKP4-207ENST00000457109 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
PKP4-207ENST00000457109 NUP155O75694 1391 aa13.39□□□□□ -0.27
PKP4-207ENST00000457109 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
PKP4-207ENST00000457109 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
PKP4-207ENST00000457109 PIK3C2BO00750 1634 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms