RNA–Protein interactions for RNA: ENST00000455089.5

EGFR-207, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 3,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-207ENST00000455089 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
EGFR-207ENST00000455089 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
EGFR-207ENST00000455089 ARID4BQ4LE39 1312 aaPredicted RBP17.75■□□□□ 0.43
EGFR-207ENST00000455089 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
EGFR-207ENST00000455089 KDM6BO15054 1643 aa17.74■□□□□ 0.43
EGFR-207ENST00000455089 STK26Q9P289 416 aa17.74■□□□□ 0.43
EGFR-207ENST00000455089 PLB1Q6P1J6 1458 aa17.73■□□□□ 0.43
EGFR-207ENST00000455089 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
EGFR-207ENST00000455089 TRAK1Q9UPV9 953 aa17.73■□□□□ 0.43
EGFR-207ENST00000455089 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
EGFR-207ENST00000455089 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
EGFR-207ENST00000455089 KIF3BO15066 747 aa17.72■□□□□ 0.43
EGFR-207ENST00000455089 GGT6Q6P531 493 aa17.72■□□□□ 0.43
EGFR-207ENST00000455089 FTSJ3Q8IY81 847 aaKnown RBP17.72■□□□□ 0.43
EGFR-207ENST00000455089 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
EGFR-207ENST00000455089 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
EGFR-207ENST00000455089 MORC1Q86VD1 984 aa17.71■□□□□ 0.43
EGFR-207ENST00000455089 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
EGFR-207ENST00000455089 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
EGFR-207ENST00000455089 TPRNQ4KMQ1 711 aa17.7■□□□□ 0.42
EGFR-207ENST00000455089 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
EGFR-207ENST00000455089 CARMIL2Q6F5E8 1435 aa17.68■□□□□ 0.42
EGFR-207ENST00000455089 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
EGFR-207ENST00000455089 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
EGFR-207ENST00000455089 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
EGFR-207ENST00000455089 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
EGFR-207ENST00000455089 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
EGFR-207ENST00000455089 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
EGFR-207ENST00000455089 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
EGFR-207ENST00000455089 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
EGFR-207ENST00000455089 CFAP43Q8NDM7 1665 aa17.66■□□□□ 0.42
EGFR-207ENST00000455089 GSE1Q14687 1217 aa17.66■□□□□ 0.42
EGFR-207ENST00000455089 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
EGFR-207ENST00000455089 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
EGFR-207ENST00000455089 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
EGFR-207ENST00000455089 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
EGFR-207ENST00000455089 BECN1Q14457 450 aa17.65■□□□□ 0.42
EGFR-207ENST00000455089 UGGT2Q9NYU1 1516 aa17.64■□□□□ 0.42
EGFR-207ENST00000455089 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
EGFR-207ENST00000455089 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
EGFR-207ENST00000455089 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
EGFR-207ENST00000455089 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
EGFR-207ENST00000455089 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
EGFR-207ENST00000455089 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
EGFR-207ENST00000455089 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
EGFR-207ENST00000455089 APBB1O00213 710 aa17.61■□□□□ 0.41
EGFR-207ENST00000455089 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
EGFR-207ENST00000455089 SOX12O15370 315 aa17.61■□□□□ 0.41
EGFR-207ENST00000455089 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
EGFR-207ENST00000455089 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
EGFR-207ENST00000455089 CAMSAP2Q08AD1 1489 aa17.6■□□□□ 0.41
EGFR-207ENST00000455089 HECW1Q76N89 1606 aa17.59■□□□□ 0.41
EGFR-207ENST00000455089 MS4A1P11836 297 aa17.59■□□□□ 0.41
EGFR-207ENST00000455089 PTPRGP23470 1445 aa17.59■□□□□ 0.41
EGFR-207ENST00000455089 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.41
EGFR-207ENST00000455089 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
EGFR-207ENST00000455089 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
EGFR-207ENST00000455089 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
EGFR-207ENST00000455089 ZBTB7CA1YPR0 619 aa17.56■□□□□ 0.4
EGFR-207ENST00000455089 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
EGFR-207ENST00000455089 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
EGFR-207ENST00000455089 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
EGFR-207ENST00000455089 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
EGFR-207ENST00000455089 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
EGFR-207ENST00000455089 NAP1L5Q96NT1 182 aaPredicted RBP17.55■□□□□ 0.4
EGFR-207ENST00000455089 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
EGFR-207ENST00000455089 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
EGFR-207ENST00000455089 CUL7Q14999 1698 aa17.54■□□□□ 0.4
EGFR-207ENST00000455089 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
EGFR-207ENST00000455089 TEX14Q8IWB6 1497 aa17.54■□□□□ 0.4
EGFR-207ENST00000455089 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
EGFR-207ENST00000455089 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
EGFR-207ENST00000455089 TSR2Q969E8 191 aaKnown RBP17.51■□□□□ 0.39
EGFR-207ENST00000455089 NUP153P49790 1475 aaKnown RBP17.51■□□□□ 0.39
EGFR-207ENST00000455089 DUSP27Q5VZP5 1158 aa17.5■□□□□ 0.39
EGFR-207ENST00000455089 PZPP20742 1482 aa17.5■□□□□ 0.39
EGFR-207ENST00000455089 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
EGFR-207ENST00000455089 POGKQ9P215 609 aa17.5■□□□□ 0.39
EGFR-207ENST00000455089 IGHDP01880 384 aa17.49■□□□□ 0.39
EGFR-207ENST00000455089 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
EGFR-207ENST00000455089 GPATCH8Q9UKJ3 1502 aaKnown RBP17.49■□□□□ 0.39
EGFR-207ENST00000455089 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
EGFR-207ENST00000455089 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
EGFR-207ENST00000455089 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
EGFR-207ENST00000455089 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
EGFR-207ENST00000455089 E9PSI1 815 aa17.48■□□□□ 0.39
EGFR-207ENST00000455089 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
EGFR-207ENST00000455089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
EGFR-207ENST00000455089 MTHFSP49914 203 aa17.47■□□□□ 0.39
EGFR-207ENST00000455089 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
EGFR-207ENST00000455089 MLECQ14165 292 aa17.46■□□□□ 0.39
EGFR-207ENST00000455089 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
EGFR-207ENST00000455089 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
EGFR-207ENST00000455089 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
EGFR-207ENST00000455089 ARID3AQ99856 593 aa17.46■□□□□ 0.39
EGFR-207ENST00000455089 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.38
EGFR-207ENST00000455089 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
EGFR-207ENST00000455089 SEC24BO95487 1268 aa17.45■□□□□ 0.38
EGFR-207ENST00000455089 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
EGFR-207ENST00000455089 TESK2Q96S53 571 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms