RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.43
RCL1-208ENST00000448872 AGLP35573 1532 aa17.76■□□□□ 0.43
RCL1-208ENST00000448872 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
RCL1-208ENST00000448872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
RCL1-208ENST00000448872 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
RCL1-208ENST00000448872 GCC2Q8IWJ2 1684 aa17.69■□□□□ 0.42
RCL1-208ENST00000448872 TRIM52Q96A61 297 aa17.69■□□□□ 0.42
RCL1-208ENST00000448872 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
RCL1-208ENST00000448872 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
RCL1-208ENST00000448872 NUP155O75694 1391 aa17.67■□□□□ 0.42
RCL1-208ENST00000448872 KDM4FA0A1W2PPD8 638 aa17.67■□□□□ 0.42
RCL1-208ENST00000448872 WASHC2CQ9Y4E1 1318 aa17.67■□□□□ 0.42
RCL1-208ENST00000448872 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
RCL1-208ENST00000448872 BCORL1Q5H9F3 1711 aa17.65■□□□□ 0.42
RCL1-208ENST00000448872 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
RCL1-208ENST00000448872 KANK1Q14678 1352 aa17.63■□□□□ 0.41
RCL1-208ENST00000448872 DEPDC5O75140 1603 aa17.63■□□□□ 0.41
RCL1-208ENST00000448872 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
RCL1-208ENST00000448872 UNC13BO14795 1591 aa17.62■□□□□ 0.41
RCL1-208ENST00000448872 ABCC3O15438 1527 aa17.62■□□□□ 0.41
RCL1-208ENST00000448872 HRCP23327 699 aa17.62■□□□□ 0.41
RCL1-208ENST00000448872 VWDEQ8N2E2 1590 aa17.61■□□□□ 0.41
RCL1-208ENST00000448872 KDM5DQ9BY66 1539 aa17.61■□□□□ 0.41
RCL1-208ENST00000448872 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
RCL1-208ENST00000448872 PZPP20742 1482 aa17.6■□□□□ 0.41
RCL1-208ENST00000448872 MADDQ8WXG6 1647 aa17.59■□□□□ 0.41
RCL1-208ENST00000448872 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
RCL1-208ENST00000448872 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.41
RCL1-208ENST00000448872 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.41
RCL1-208ENST00000448872 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.41
RCL1-208ENST00000448872 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
RCL1-208ENST00000448872 FBXO31Q5XUX0 539 aaPredicted RBP17.56■□□□□ 0.4
RCL1-208ENST00000448872 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
RCL1-208ENST00000448872 LMTK2Q8IWU2 1503 aa17.56■□□□□ 0.4
RCL1-208ENST00000448872 PKD2Q13563 968 aa17.56■□□□□ 0.4
RCL1-208ENST00000448872 NPATQ14207 1427 aa17.54■□□□□ 0.4
RCL1-208ENST00000448872 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
RCL1-208ENST00000448872 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
RCL1-208ENST00000448872 PTPRMP28827 1452 aa17.53■□□□□ 0.4
RCL1-208ENST00000448872 CEP152O94986 1710 aa17.51■□□□□ 0.39
RCL1-208ENST00000448872 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
RCL1-208ENST00000448872 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
RCL1-208ENST00000448872 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
RCL1-208ENST00000448872 FER1L4A9Z1Z3 1794 aa17.5■□□□□ 0.39
RCL1-208ENST00000448872 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
RCL1-208ENST00000448872 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
RCL1-208ENST00000448872 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
RCL1-208ENST00000448872 ZC3H13Q5T200 1668 aaKnown RBP17.49■□□□□ 0.39
RCL1-208ENST00000448872 TET3O43151 1660 aa17.47■□□□□ 0.39
RCL1-208ENST00000448872 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
RCL1-208ENST00000448872 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
RCL1-208ENST00000448872 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
RCL1-208ENST00000448872 MROH2AA6NES4 1674 aa17.44■□□□□ 0.38
RCL1-208ENST00000448872 NOS1P29475 1434 aa17.44■□□□□ 0.38
RCL1-208ENST00000448872 E9PCH4 1651 aa17.44■□□□□ 0.38
RCL1-208ENST00000448872 C3P01024 1663 aa17.44■□□□□ 0.38
RCL1-208ENST00000448872 TNRQ92752 1358 aa17.43■□□□□ 0.38
RCL1-208ENST00000448872 PTPRTO14522 1441 aa17.43■□□□□ 0.38
RCL1-208ENST00000448872 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
RCL1-208ENST00000448872 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
RCL1-208ENST00000448872 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
RCL1-208ENST00000448872 IDI1Q13907 227 aa17.39■□□□□ 0.37
RCL1-208ENST00000448872 SYNMO15061 1565 aa17.39■□□□□ 0.37
RCL1-208ENST00000448872 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
RCL1-208ENST00000448872 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
RCL1-208ENST00000448872 TRPM2O94759 1503 aa17.35■□□□□ 0.37
RCL1-208ENST00000448872 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
RCL1-208ENST00000448872 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
RCL1-208ENST00000448872 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.37
RCL1-208ENST00000448872 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.37
RCL1-208ENST00000448872 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
RCL1-208ENST00000448872 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
RCL1-208ENST00000448872 CLTCL1P53675 1640 aa17.31■□□□□ 0.36
RCL1-208ENST00000448872 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
RCL1-208ENST00000448872 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
RCL1-208ENST00000448872 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
RCL1-208ENST00000448872 MYO3AQ8NEV4 1616 aa17.29■□□□□ 0.36
RCL1-208ENST00000448872 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
RCL1-208ENST00000448872 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
RCL1-208ENST00000448872 HSPA2P54652 639 aa17.28■□□□□ 0.36
RCL1-208ENST00000448872 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
RCL1-208ENST00000448872 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.35
RCL1-208ENST00000448872 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
RCL1-208ENST00000448872 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
RCL1-208ENST00000448872 SPATA31E1Q6ZUB1 1445 aa17.25■□□□□ 0.35
RCL1-208ENST00000448872 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
RCL1-208ENST00000448872 ADGRB3O60242 1522 aa17.24■□□□□ 0.35
RCL1-208ENST00000448872 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
RCL1-208ENST00000448872 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
RCL1-208ENST00000448872 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
RCL1-208ENST00000448872 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.35
RCL1-208ENST00000448872 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
RCL1-208ENST00000448872 LTKP29376 864 aa17.19■□□□□ 0.34
RCL1-208ENST00000448872 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
RCL1-208ENST00000448872 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
RCL1-208ENST00000448872 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
RCL1-208ENST00000448872 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
RCL1-208ENST00000448872 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
RCL1-208ENST00000448872 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
RCL1-208ENST00000448872 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms